RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 UHRF1BP1Q6BDS2 1440 aa19.68■□□□□ 0.74
PRPF40A-203ENST00000448428 DUOX2Q9NRD8 1548 aa19.67■□□□□ 0.74
PRPF40A-203ENST00000448428 NPATQ14207 1427 aa19.67■□□□□ 0.74
PRPF40A-203ENST00000448428 WASHC2CQ9Y4E1 1318 aa19.66■□□□□ 0.74
PRPF40A-203ENST00000448428 KIF15Q9NS87 1388 aa19.66■□□□□ 0.74
PRPF40A-203ENST00000448428 EIF2AK4Q9P2K8 1649 aaKnown RBP19.65■□□□□ 0.74
PRPF40A-203ENST00000448428 PTPRKQ15262 1439 aa19.65■□□□□ 0.74
PRPF40A-203ENST00000448428 RNF17Q9BXT8 1623 aaKnown RBP19.65■□□□□ 0.74
PRPF40A-203ENST00000448428 KDM5DQ9BY66 1539 aa19.63■□□□□ 0.73
PRPF40A-203ENST00000448428 FAM135AQ9P2D6 1515 aa19.62■□□□□ 0.73
PRPF40A-203ENST00000448428 ANKRD30AQ9BXX3 1397 aa19.62■□□□□ 0.73
PRPF40A-203ENST00000448428 NCOA1Q15788 1441 aa19.61■□□□□ 0.73
PRPF40A-203ENST00000448428 FBXO31Q5XUX0 539 aaPredicted RBP19.6■□□□□ 0.73
PRPF40A-203ENST00000448428 MROH1Q8NDA8 1641 aa19.6■□□□□ 0.73
PRPF40A-203ENST00000448428 ERBINQ96RT1 1412 aa19.59■□□□□ 0.73
PRPF40A-203ENST00000448428 STRCQ7RTU9 1775 aa19.58■□□□□ 0.73
PRPF40A-203ENST00000448428 ADGRL2O95490 1459 aa19.57■□□□□ 0.72
PRPF40A-203ENST00000448428 ABCC3O15438 1527 aa19.56■□□□□ 0.72
PRPF40A-203ENST00000448428 PZPP20742 1482 aa19.56■□□□□ 0.72
PRPF40A-203ENST00000448428 CEP152O94986 1710 aa19.56■□□□□ 0.72
PRPF40A-203ENST00000448428 ZC3H13Q5T200 1668 aaKnown RBP19.56■□□□□ 0.72
PRPF40A-203ENST00000448428 MYO3AQ8NEV4 1616 aa19.55■□□□□ 0.72
PRPF40A-203ENST00000448428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.54■□□□□ 0.723e-10■■■□□ 15.8
PRPF40A-203ENST00000448428 CFAP65Q6ZU64 1925 aaKnown RBP19.54■□□□□ 0.72
PRPF40A-203ENST00000448428 ZNF142P52746 1687 aaPredicted RBP19.52■□□□□ 0.72
PRPF40A-203ENST00000448428 DEPDC5O75140 1603 aa19.52■□□□□ 0.72
PRPF40A-203ENST00000448428 TNRQ92752 1358 aa19.52■□□□□ 0.72
PRPF40A-203ENST00000448428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.52■□□□□ 0.72
PRPF40A-203ENST00000448428 CEP170BQ9Y4F5 1589 aaPredicted RBP19.52■□□□□ 0.71
PRPF40A-203ENST00000448428 PRDM15P57071 1507 aaPredicted RBP19.51■□□□□ 0.71
PRPF40A-203ENST00000448428 ITGAEP38570 1179 aa19.51■□□□□ 0.71
PRPF40A-203ENST00000448428 CAMSAP1Q5T5Y3 1602 aa19.51■□□□□ 0.71
PRPF40A-203ENST00000448428 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
PRPF40A-203ENST00000448428 A2ML1A8K2U0 1454 aa19.48■□□□□ 0.71
PRPF40A-203ENST00000448428 KANK1Q14678 1352 aa19.48■□□□□ 0.71
PRPF40A-203ENST00000448428 ANKRD50Q9ULJ7 1429 aa19.48■□□□□ 0.71
PRPF40A-203ENST00000448428 ROCK1Q13464 1354 aa19.47■□□□□ 0.71
PRPF40A-203ENST00000448428 RRBP1Q9P2E9 1410 aaKnown RBP19.46■□□□□ 0.71
PRPF40A-203ENST00000448428 SPATA31D1Q6ZQQ2 1576 aa19.45■□□□□ 0.7
PRPF40A-203ENST00000448428 VWDEQ8N2E2 1590 aa19.45■□□□□ 0.7
PRPF40A-203ENST00000448428 NCKAP5LQ9HCH0 1330 aa19.45■□□□□ 0.7
PRPF40A-203ENST00000448428 ARHGAP31Q2M1Z3 1444 aa19.44■□□□□ 0.7
PRPF40A-203ENST00000448428 ERVK-7P63135 1459 aa19.44■□□□□ 0.7
PRPF40A-203ENST00000448428 PTPRTO14522 1441 aa19.43■□□□□ 0.7
PRPF40A-203ENST00000448428 PLA2R1Q13018 1463 aa19.42■□□□□ 0.7
PRPF40A-203ENST00000448428 NLRP1Q9C000 1473 aa19.42■□□□□ 0.7
PRPF40A-203ENST00000448428 LMTK2Q8IWU2 1503 aa19.41■□□□□ 0.7
PRPF40A-203ENST00000448428 PKD2Q13563 968 aa19.41■□□□□ 0.7
PRPF40A-203ENST00000448428 ILDR1Q86SU0 546 aaPredicted RBP19.4■□□□□ 0.7
PRPF40A-203ENST00000448428 THEMISQ8N1K5 641 aaPredicted RBP19.4■□□□□ 0.7
PRPF40A-203ENST00000448428 UGGT1Q9NYU2 1555 aa19.39■□□□□ 0.69
PRPF40A-203ENST00000448428 UNC13BO14795 1591 aa19.36■□□□□ 0.69
PRPF40A-203ENST00000448428 EFCAB6Q5THR3 1501 aa19.35■□□□□ 0.69
PRPF40A-203ENST00000448428 CERKQ8TCT0 537 aa19.34■□□□□ 0.69
PRPF40A-203ENST00000448428 POLR1AO95602 1720 aaPredicted RBP19.34■□□□□ 0.69
PRPF40A-203ENST00000448428 UBR1Q8IWV7 1749 aa19.34■□□□□ 0.69
PRPF40A-203ENST00000448428 ANKLE2Q86XL3 938 aa19.33■□□□□ 0.68
PRPF40A-203ENST00000448428 TET3O43151 1660 aa19.33■□□□□ 0.68
PRPF40A-203ENST00000448428 GCC2Q8IWJ2 1684 aa19.31■□□□□ 0.68
PRPF40A-203ENST00000448428 IDI1Q13907 227 aa19.31■□□□□ 0.68
PRPF40A-203ENST00000448428 FBXO41Q8TF61 875 aa19.31■□□□□ 0.68
PRPF40A-203ENST00000448428 NOS1P29475 1434 aa19.31■□□□□ 0.68
PRPF40A-203ENST00000448428 NUP155O75694 1391 aa19.31■□□□□ 0.68
PRPF40A-203ENST00000448428 PIK3C2BO00750 1634 aa19.3■□□□□ 0.68
PRPF40A-203ENST00000448428 SYNMO15061 1565 aa19.3■□□□□ 0.68
PRPF40A-203ENST00000448428 NEURL4Q96JN8 1562 aa19.3■□□□□ 0.68
PRPF40A-203ENST00000448428 IQGAP3Q86VI3 1631 aa19.29■□□□□ 0.68
PRPF40A-203ENST00000448428 RPRD2Q5VT52 1461 aaKnown RBP19.29■□□□□ 0.68
PRPF40A-203ENST00000448428 NAIPQ13075 1403 aa19.28■□□□□ 0.68
PRPF40A-203ENST00000448428 LTBP4Q8N2S1 1624 aa19.28■□□□□ 0.68
PRPF40A-203ENST00000448428 E9PCH4 1651 aa19.27■□□□□ 0.68
PRPF40A-203ENST00000448428 ZNF335Q9H4Z2 1342 aaPredicted RBP19.26■□□□□ 0.67
PRPF40A-203ENST00000448428 STAG3Q9UJ98 1225 aa19.26■□□□□ 0.67
PRPF40A-203ENST00000448428 MED14O60244 1454 aa19.25■□□□□ 0.67
PRPF40A-203ENST00000448428 SLC52A1Q9NWF4 448 aa19.25■□□□□ 0.67
PRPF40A-203ENST00000448428 NPHP4O75161 1426 aaPredicted RBP19.24■□□□□ 0.67
PRPF40A-203ENST00000448428 KDM5AP29375 1690 aaKnown RBP19.24■□□□□ 0.67
PRPF40A-203ENST00000448428 ARHGAP23Q9P227 1491 aa19.23■□□□□ 0.67
PRPF40A-203ENST00000448428 LTKP29376 864 aa19.23■□□□□ 0.67
PRPF40A-203ENST00000448428 TXNDC2Q86VQ3 553 aa19.23■□□□□ 0.67
PRPF40A-203ENST00000448428 SLIT1O75093 1534 aa19.23■□□□□ 0.67
PRPF40A-203ENST00000448428 HFM1A2PYH4 1435 aa19.22■□□□□ 0.67
PRPF40A-203ENST00000448428 IQGAP1P46940 1657 aa19.21■□□□□ 0.67
PRPF40A-203ENST00000448428 TMEM2Q9UHN6 1383 aa19.2■□□□□ 0.66
PRPF40A-203ENST00000448428 SCAF11Q99590 1463 aaKnown RBP19.2■□□□□ 0.66
PRPF40A-203ENST00000448428 MYO5BQ9ULV0 1848 aa19.19■□□□□ 0.66
PRPF40A-203ENST00000448428 EID1Q9Y6B2 187 aa19.19■□□□□ 0.66
PRPF40A-203ENST00000448428 ADGRB3O60242 1522 aa19.18■□□□□ 0.66
PRPF40A-203ENST00000448428 TRIM52Q96A61 297 aa19.17■□□□□ 0.66
PRPF40A-203ENST00000448428 TMEM131LA2VDJ0 1609 aa19.15■□□□□ 0.66
PRPF40A-203ENST00000448428 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
PRPF40A-203ENST00000448428 IQSEC2Q5JU85 1478 aa19.13■□□□□ 0.65
PRPF40A-203ENST00000448428 SPHKAPQ2M3C7 1700 aa19.13■□□□□ 0.65
PRPF40A-203ENST00000448428 STRCP1A6NGW2 1772 aa19.11■□□□□ 0.65
PRPF40A-203ENST00000448428 CPS1P31327 1500 aa19.1■□□□□ 0.65
PRPF40A-203ENST00000448428 ZFYVE9O95405 1425 aa19.09■□□□□ 0.65
PRPF40A-203ENST00000448428 SLC4A1APQ9BWU0 796 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-203ENST00000448428 RIMS2Q9UQ26 1411 aa19.08■□□□□ 0.65
PRPF40A-203ENST00000448428 HDGFP51858 240 aaKnown RBP19.08■□□□□ 0.64
PRPF40A-203ENST00000448428 SLC26A8Q96RN1 970 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms