RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 NAIPQ13075 1403 aa8.39□□□□□ -1.07
PROM1-201ENST00000447510 ATP7AQ04656 1500 aa8.39□□□□□ -1.07
PROM1-201ENST00000447510 DNMT1P26358 1616 aaKnown RBP8.39□□□□□ -1.07
PROM1-201ENST00000447510 ATP10AO60312 1499 aa8.38□□□□□ -1.07
PROM1-201ENST00000447510 ZFYVE16Q7Z3T8 1539 aa8.38□□□□□ -1.07
PROM1-201ENST00000447510 ARHGEF5Q12774 1597 aa8.38□□□□□ -1.07
PROM1-201ENST00000447510 SHANK2Q9UPX8 1470 aa8.38□□□□□ -1.07
PROM1-201ENST00000447510 RGL3Q3MIN7 710 aa8.37□□□□□ -1.07
PROM1-201ENST00000447510 COL17A1Q9UMD9 1497 aaPredicted RBP8.37□□□□□ -1.07
PROM1-201ENST00000447510 MLH3Q9UHC1 1453 aa8.37□□□□□ -1.07
PROM1-201ENST00000447510 SENP3Q9H4L4 574 aaPredicted RBP8.37□□□□□ -1.07
PROM1-201ENST00000447510 KIF13AQ9H1H9 1805 aa8.36□□□□□ -1.07
PROM1-201ENST00000447510 MAGI2Q86UL8 1455 aa8.36□□□□□ -1.07
PROM1-201ENST00000447510 DUOX2Q9NRD8 1548 aa8.36□□□□□ -1.07
PROM1-201ENST00000447510 KDM2AQ9Y2K7 1162 aa8.35□□□□□ -1.07
PROM1-201ENST00000447510 PPP1R15AO75807 674 aaPredicted RBP8.35□□□□□ -1.07
PROM1-201ENST00000447510 SIN3AQ96ST3 1273 aa8.35□□□□□ -1.07
PROM1-201ENST00000447510 HECW2Q9P2P5 1572 aa8.35□□□□□ -1.07
PROM1-201ENST00000447510 CEBPAP49715 358 aaPredicted RBP8.34□□□□□ -1.07
PROM1-201ENST00000447510 TONSLQ96HA7 1378 aa8.34□□□□□ -1.07
PROM1-201ENST00000447510 ERBINQ96RT1 1412 aa8.34□□□□□ -1.07
PROM1-201ENST00000447510 AEBP2Q6ZN18 517 aaPredicted RBP8.34□□□□□ -1.07
PROM1-201ENST00000447510 ADGRL2O95490 1459 aa8.33□□□□□ -1.08
PROM1-201ENST00000447510 PPP6R1Q9UPN7 881 aa8.33□□□□□ -1.08
PROM1-201ENST00000447510 FBXO31Q5XUX0 539 aaPredicted RBP8.31□□□□□ -1.08
PROM1-201ENST00000447510 DHX57Q6P158 1386 aaKnown RBP8.3□□□□□ -1.08
PROM1-201ENST00000447510 CCDC144AA2RUR9 1427 aa8.29□□□□□ -1.08
PROM1-201ENST00000447510 ADGBQ8N7X0 1667 aa8.29□□□□□ -1.08
PROM1-201ENST00000447510 HDGFP51858 240 aaKnown RBP8.29□□□□□ -1.08
PROM1-201ENST00000447510 FKBP8Q14318 412 aa8.29□□□□□ -1.08
PROM1-201ENST00000447510 KDM5CP41229 1560 aa8.29□□□□□ -1.08
PROM1-201ENST00000447510 NUTM2DQ5VT03 806 aaPredicted RBP8.29□□□□□ -1.08
PROM1-201ENST00000447510 MAST1Q9Y2H9 1570 aa8.28□□□□□ -1.08
PROM1-201ENST00000447510 DCAF11Q8TEB1 546 aa8.28□□□□□ -1.08
PROM1-201ENST00000447510 PPRC1Q5VV67 1664 aaKnown RBP8.28□□□□□ -1.08
PROM1-201ENST00000447510 NEFLP07196 543 aa8.28□□□□□ -1.08
PROM1-201ENST00000447510 ZMYM3Q14202 1370 aa8.28□□□□□ -1.08
PROM1-201ENST00000447510 DIP2CQ9Y2E4 1556 aa8.27□□□□□ -1.09
PROM1-201ENST00000447510 KIDINS220Q9ULH0 1771 aa8.27□□□□□ -1.09
PROM1-201ENST00000447510 SLC52A1Q9NWF4 448 aa8.27□□□□□ -1.09
PROM1-201ENST00000447510 EID1Q9Y6B2 187 aa8.27□□□□□ -1.09
PROM1-201ENST00000447510 CLSPNQ9HAW4 1339 aa8.27□□□□□ -1.09
PROM1-201ENST00000447510 INO80Q9ULG1 1556 aaPredicted RBP8.27□□□□□ -1.09
PROM1-201ENST00000447510 PLXNC1O60486 1568 aa8.26□□□□□ -1.09
PROM1-201ENST00000447510 ZMYM4Q5VZL5 1548 aa8.26□□□□□ -1.09
PROM1-201ENST00000447510 RICTORQ6R327 1708 aa8.26□□□□□ -1.09
PROM1-201ENST00000447510 ABCA6Q8N139 1617 aa8.26□□□□□ -1.09
PROM1-201ENST00000447510 ARHGEF40Q8TER5 1519 aa8.26□□□□□ -1.09
PROM1-201ENST00000447510 CNTLNQ9NXG0 1405 aa8.26□□□□□ -1.09
PROM1-201ENST00000447510 CROCC2H7BZ55 1655 aa8.26□□□□□ -1.09
PROM1-201ENST00000447510 ANO8Q9HCE9 1232 aaPredicted RBP8.25□□□□□ -1.09
PROM1-201ENST00000447510 IDI1Q13907 227 aa8.25□□□□□ -1.09
PROM1-201ENST00000447510 POLR3GLQ9BT43 218 aa8.25□□□□□ -1.09
PROM1-201ENST00000447510 RBM19Q9Y4C8 960 aaKnown RBP8.25□□□□□ -1.09
PROM1-201ENST00000447510 FAM135AQ9P2D6 1515 aa8.25□□□□□ -1.09
PROM1-201ENST00000447510 TNRQ92752 1358 aa8.24□□□□□ -1.09
PROM1-201ENST00000447510 FRMPD1Q5SYB0 1578 aa8.24□□□□□ -1.09
PROM1-201ENST00000447510 THEMISQ8N1K5 641 aaPredicted RBP8.24□□□□□ -1.09
PROM1-201ENST00000447510 L3MBTL2Q969R5 705 aa8.24□□□□□ -1.09
PROM1-201ENST00000447510 GCC2Q8IWJ2 1684 aa8.23□□□□□ -1.09
PROM1-201ENST00000447510 CCDC136Q96JN2 1154 aa8.22□□□□□ -1.09
PROM1-201ENST00000447510 VGFO15240 615 aaPredicted RBP8.22□□□□□ -1.09
PROM1-201ENST00000447510 TXNDC2Q86VQ3 553 aa8.22□□□□□ -1.09
PROM1-201ENST00000447510 PZPP20742 1482 aa8.22□□□□□ -1.09
PROM1-201ENST00000447510 AGLP35573 1532 aa8.21□□□□□ -1.09
PROM1-201ENST00000447510 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.21□□□□□ -1.1
PROM1-201ENST00000447510 CFAP65Q6ZU64 1925 aaKnown RBP8.21□□□□□ -1.1
PROM1-201ENST00000447510 KDM5DQ9BY66 1539 aa8.21□□□□□ -1.1
PROM1-201ENST00000447510 ANKRD30BQ9BXX2 1392 aa8.21□□□□□ -1.1
PROM1-201ENST00000447510 TIMELESSQ9UNS1 1208 aa8.2□□□□□ -1.1
PROM1-201ENST00000447510 NPATQ14207 1427 aa8.2□□□□□ -1.1
PROM1-201ENST00000447510 C14orf37Q86TY3 774 aa8.2□□□□□ -1.1
PROM1-201ENST00000447510 ANKLE2Q86XL3 938 aa8.2□□□□□ -1.1
PROM1-201ENST00000447510 STK26Q9P289 416 aa8.19□□□□□ -1.1
PROM1-201ENST00000447510 ABCC3O15438 1527 aa8.19□□□□□ -1.1
PROM1-201ENST00000447510 HSPA2P54652 639 aa8.19□□□□□ -1.1
PROM1-201ENST00000447510 NBR1Q14596 966 aa8.19□□□□□ -1.1
PROM1-201ENST00000447510 EIF2AK4Q9P2K8 1649 aaKnown RBP8.18□□□□□ -1.1
PROM1-201ENST00000447510 CARD11Q9BXL7 1154 aa8.18□□□□□ -1.1
PROM1-201ENST00000447510 RTN4Q9NQC3 1192 aaKnown RBP8.18□□□□□ -1.1
PROM1-201ENST00000447510 KDM4FA0A1W2PPD8 638 aa8.17□□□□□ -1.1
PROM1-201ENST00000447510 DEKP35659 375 aaKnown RBP8.17□□□□□ -1.1
PROM1-201ENST00000447510 UHRF1BP1Q6BDS2 1440 aa8.17□□□□□ -1.1
PROM1-201ENST00000447510 POGKQ9P215 609 aa8.17□□□□□ -1.1
PROM1-201ENST00000447510 RPGRIP1LQ68CZ1 1315 aa8.16□□□□□ -1.1
PROM1-201ENST00000447510 PRDM15P57071 1507 aaPredicted RBP8.16□□□□□ -1.1
PROM1-201ENST00000447510 SLC26A8Q96RN1 970 aa8.16□□□□□ -1.1
PROM1-201ENST00000447510 RPRD2Q5VT52 1461 aaKnown RBP8.16□□□□□ -1.1
PROM1-201ENST00000447510 SAFB2Q14151 953 aaKnown RBP eCLIP8.15□□□□□ -1.1
PROM1-201ENST00000447510 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.15□□□□□ -1.1
PROM1-201ENST00000447510 UNC13BO14795 1591 aa8.15□□□□□ -1.1
PROM1-201ENST00000447510 REREQ9P2R6 1566 aa8.15□□□□□ -1.1
PROM1-201ENST00000447510 CLTCQ00610 1675 aaKnown RBP8.15□□□□□ -1.1
PROM1-201ENST00000447510 STAC3Q96MF2 364 aa8.15□□□□□ -1.1
PROM1-201ENST00000447510 HIRIP3Q9BW71 556 aaPredicted RBP8.15□□□□□ -1.1
PROM1-201ENST00000447510 ARHGAP31Q2M1Z3 1444 aa8.15□□□□□ -1.11
PROM1-201ENST00000447510 ERVK-7P63135 1459 aa8.15□□□□□ -1.11
PROM1-201ENST00000447510 CEP152O94986 1710 aa8.14□□□□□ -1.11
PROM1-201ENST00000447510 PTPRMP28827 1452 aa8.14□□□□□ -1.11
PROM1-201ENST00000447510 EFCAB6Q5THR3 1501 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms