RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 DUOX2Q9NRD8 1548 aa11.25□□□□□ -0.61
SF3A3P1-201ENST00000446317 MAGI2Q86UL8 1455 aa11.22□□□□□ -0.61
SF3A3P1-201ENST00000446317 NUP155O75694 1391 aa11.21□□□□□ -0.61
SF3A3P1-201ENST00000446317 ERBINQ96RT1 1412 aa11.21□□□□□ -0.62
SF3A3P1-201ENST00000446317 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
SF3A3P1-201ENST00000446317 MROH1Q8NDA8 1641 aa11.18□□□□□ -0.62
SF3A3P1-201ENST00000446317 CCER1Q8TC90 406 aaPredicted RBP11.18□□□□□ -0.62
SF3A3P1-201ENST00000446317 WASHC2CQ9Y4E1 1318 aa11.17□□□□□ -0.62
SF3A3P1-201ENST00000446317 CEP152O94986 1710 aa11.17□□□□□ -0.62
SF3A3P1-201ENST00000446317 CEBPAP49715 358 aaPredicted RBP11.17□□□□□ -0.62
SF3A3P1-201ENST00000446317 PZPP20742 1482 aa11.16□□□□□ -0.62
SF3A3P1-201ENST00000446317 PKD2Q13563 968 aa11.16□□□□□ -0.62
SF3A3P1-201ENST00000446317 MPHOSPH9Q99550 1183 aa11.16□□□□□ -0.62
SF3A3P1-201ENST00000446317 UNC13BO14795 1591 aa11.15□□□□□ -0.62
SF3A3P1-201ENST00000446317 ESF1Q9H501 851 aaKnown RBP11.15□□□□□ -0.62
SF3A3P1-201ENST00000446317 EIF2AK4Q9P2K8 1649 aaKnown RBP11.15□□□□□ -0.62
SF3A3P1-201ENST00000446317 KANK1Q14678 1352 aa11.15□□□□□ -0.62
SF3A3P1-201ENST00000446317 CLTCQ00610 1675 aaKnown RBP11.15□□□□□ -0.63
SF3A3P1-201ENST00000446317 FAM135AQ9P2D6 1515 aa11.14□□□□□ -0.63
SF3A3P1-201ENST00000446317 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
SF3A3P1-201ENST00000446317 FBXO31Q5XUX0 539 aaPredicted RBP11.13□□□□□ -0.63
SF3A3P1-201ENST00000446317 REREQ9P2R6 1566 aa11.13□□□□□ -0.63
SF3A3P1-201ENST00000446317 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
SF3A3P1-201ENST00000446317 NEUROD1Q13562 356 aa11.12□□□□□ -0.63
SF3A3P1-201ENST00000446317 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
SF3A3P1-201ENST00000446317 DEPDC5O75140 1603 aa11.12□□□□□ -0.63
SF3A3P1-201ENST00000446317 MADDQ8WXG6 1647 aa11.12□□□□□ -0.63
SF3A3P1-201ENST00000446317 ABCC3O15438 1527 aa11.12□□□□□ -0.63
SF3A3P1-201ENST00000446317 AGLP35573 1532 aa11.12□□□□□ -0.63
SF3A3P1-201ENST00000446317 PRDM15P57071 1507 aaPredicted RBP11.12□□□□□ -0.63
SF3A3P1-201ENST00000446317 BCORL1Q5H9F3 1711 aa11.11□□□□□ -0.63
SF3A3P1-201ENST00000446317 RIMS1Q86UR5 1692 aaKnown RBP11.11□□□□□ -0.63
SF3A3P1-201ENST00000446317 IQGAP3Q86VI3 1631 aa11.1□□□□□ -0.63
SF3A3P1-201ENST00000446317 KDM5DQ9BY66 1539 aa11.1□□□□□ -0.63
SF3A3P1-201ENST00000446317 KDM4FA0A1W2PPD8 638 aa11.09□□□□□ -0.63
SF3A3P1-201ENST00000446317 FER1L4A9Z1Z3 1794 aa11.09□□□□□ -0.63
SF3A3P1-201ENST00000446317 CAMSAP1Q5T5Y3 1602 aa11.09□□□□□ -0.63
SF3A3P1-201ENST00000446317 UGGT1Q9NYU2 1555 aa11.08□□□□□ -0.64
SF3A3P1-201ENST00000446317 CHGAP10645 457 aaKnown RBP11.08□□□□□ -0.64
SF3A3P1-201ENST00000446317 E9PCH4 1651 aa11.08□□□□□ -0.64
SF3A3P1-201ENST00000446317 VWDEQ8N2E2 1590 aa11.08□□□□□ -0.64
SF3A3P1-201ENST00000446317 ZMYM3Q14202 1370 aa11.07□□□□□ -0.64
SF3A3P1-201ENST00000446317 NPATQ14207 1427 aa11.07□□□□□ -0.64
SF3A3P1-201ENST00000446317 EFCAB6Q5THR3 1501 aa11.06□□□□□ -0.64
SF3A3P1-201ENST00000446317 HRCP23327 699 aa11.06□□□□□ -0.64
SF3A3P1-201ENST00000446317 CFAP65Q6ZU64 1925 aaKnown RBP11.06□□□□□ -0.64
SF3A3P1-201ENST00000446317 TET3O43151 1660 aa11.05□□□□□ -0.64
SF3A3P1-201ENST00000446317 ADAMTSL3P82987 1691 aa11.05□□□□□ -0.64
SF3A3P1-201ENST00000446317 RGL3Q3MIN7 710 aa11.04□□□□□ -0.64
SF3A3P1-201ENST00000446317 PLA2R1Q13018 1463 aa11.04□□□□□ -0.64
SF3A3P1-201ENST00000446317 C3P01024 1663 aa11.03□□□□□ -0.64
SF3A3P1-201ENST00000446317 NUTM2DQ5VT03 806 aaPredicted RBP11.03□□□□□ -0.64
SF3A3P1-201ENST00000446317 LMTK2Q8IWU2 1503 aa11.03□□□□□ -0.64
SF3A3P1-201ENST00000446317 ZC3H13Q5T200 1668 aaKnown RBP11.03□□□□□ -0.64
SF3A3P1-201ENST00000446317 SYNMO15061 1565 aa11.01□□□□□ -0.65
SF3A3P1-201ENST00000446317 PTPRMP28827 1452 aa11.01□□□□□ -0.65
SF3A3P1-201ENST00000446317 ERVK-7P63135 1459 aa11.01□□□□□ -0.65
SF3A3P1-201ENST00000446317 ANKRD30BQ9BXX2 1392 aa11.01□□□□□ -0.65
SF3A3P1-201ENST00000446317 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
SF3A3P1-201ENST00000446317 CLTCL1P53675 1640 aa11.01□□□□□ -0.65
SF3A3P1-201ENST00000446317 CNTLNQ9NXG0 1405 aa11□□□□□ -0.65
SF3A3P1-201ENST00000446317 TNRQ92752 1358 aa11□□□□□ -0.65
SF3A3P1-201ENST00000446317 SPHKAPQ2M3C7 1700 aa11□□□□□ -0.65
SF3A3P1-201ENST00000446317 KCNA4P22459 653 aa10.99□□□□□ -0.65
SF3A3P1-201ENST00000446317 IDI1Q13907 227 aa10.99□□□□□ -0.65
SF3A3P1-201ENST00000446317 ZNF326Q5BKZ1 582 aaKnown RBP10.99□□□□□ -0.65
SF3A3P1-201ENST00000446317 STAG3Q9UJ98 1225 aa10.99□□□□□ -0.65
SF3A3P1-201ENST00000446317 PPP6R1Q9UPN7 881 aa10.99□□□□□ -0.65
SF3A3P1-201ENST00000446317 KDM2AQ9Y2K7 1162 aa10.99□□□□□ -0.65
SF3A3P1-201ENST00000446317 CCDC144AA2RUR9 1427 aa10.98□□□□□ -0.65
SF3A3P1-201ENST00000446317 TRPM2O94759 1503 aa10.97□□□□□ -0.65
SF3A3P1-201ENST00000446317 MROH2AA6NES4 1674 aa10.97□□□□□ -0.65
SF3A3P1-201ENST00000446317 NOS1P29475 1434 aa10.97□□□□□ -0.65
SF3A3P1-201ENST00000446317 ARHGAP31Q2M1Z3 1444 aa10.97□□□□□ -0.65
SF3A3P1-201ENST00000446317 PTPRTO14522 1441 aa10.96□□□□□ -0.66
SF3A3P1-201ENST00000446317 SPATA31D1Q6ZQQ2 1576 aa10.95□□□□□ -0.66
SF3A3P1-201ENST00000446317 PIK3C2BO00750 1634 aa10.95□□□□□ -0.66
SF3A3P1-201ENST00000446317 RPRD2Q5VT52 1461 aaKnown RBP10.95□□□□□ -0.66
SF3A3P1-201ENST00000446317 HSPA2P54652 639 aa10.94□□□□□ -0.66
SF3A3P1-201ENST00000446317 ACIN1Q9UKV3 1341 aaKnown RBP10.94□□□□□ -0.66
SF3A3P1-201ENST00000446317 L3MBTL2Q969R5 705 aa10.93□□□□□ -0.66
SF3A3P1-201ENST00000446317 MYO3AQ8NEV4 1616 aa10.93□□□□□ -0.66
SF3A3P1-201ENST00000446317 TONSLQ96HA7 1378 aa10.93□□□□□ -0.66
SF3A3P1-201ENST00000446317 ADRA2BP18089 450 aa10.93□□□□□ -0.66
SF3A3P1-201ENST00000446317 DCAF11Q8TEB1 546 aa10.93□□□□□ -0.66
SF3A3P1-201ENST00000446317 MYO5BQ9ULV0 1848 aa10.91□□□□□ -0.66
SF3A3P1-201ENST00000446317 MSH5O43196 834 aa10.91□□□□□ -0.66
SF3A3P1-201ENST00000446317 BCANQ96GW7 911 aa10.91□□□□□ -0.66
SF3A3P1-201ENST00000446317 SLC52A1Q9NWF4 448 aa10.89□□□□□ -0.67
SF3A3P1-201ENST00000446317 ADGRB3O60242 1522 aa10.89□□□□□ -0.67
SF3A3P1-201ENST00000446317 UHRF1BP1Q6BDS2 1440 aa10.89□□□□□ -0.67
SF3A3P1-201ENST00000446317 SPATA31E1Q6ZUB1 1445 aa10.89□□□□□ -0.67
SF3A3P1-201ENST00000446317 CEP170BQ9Y4F5 1589 aaPredicted RBP10.89□□□□□ -0.67
SF3A3P1-201ENST00000446317 A2ML1A8K2U0 1454 aa10.89□□□□□ -0.67
SF3A3P1-201ENST00000446317 TMEM131LA2VDJ0 1609 aa10.89□□□□□ -0.67
SF3A3P1-201ENST00000446317 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
SF3A3P1-201ENST00000446317 ADGRF5Q8IZF2 1346 aa10.88□□□□□ -0.67
SF3A3P1-201ENST00000446317 NCKAP5LQ9HCH0 1330 aa10.88□□□□□ -0.67
SF3A3P1-201ENST00000446317 KIF1BO60333 1816 aa10.88□□□□□ -0.67
SF3A3P1-201ENST00000446317 NBPF8Q3BBV2 869 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms