RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 POLA2Q14181 598 aa16.27■□□□□ 0.2
UBE2D4-206ENST00000446008 ZNF335Q9H4Z2 1342 aaPredicted RBP16.26■□□□□ 0.19
UBE2D4-206ENST00000446008 ZNF142P52746 1687 aaPredicted RBP16.26■□□□□ 0.19
UBE2D4-206ENST00000446008 SUPT6HQ7KZ85 1726 aaKnown RBP16.25■□□□□ 0.19
UBE2D4-206ENST00000446008 SPAG9O60271 1321 aaKnown RBP16.25■□□□□ 0.19
UBE2D4-206ENST00000446008 UBAP1LF5GYI3 381 aa16.25■□□□□ 0.19
UBE2D4-206ENST00000446008 TCOF1Q13428 1488 aaKnown RBP16.24■□□□□ 0.19
UBE2D4-206ENST00000446008 PTPRKQ15262 1439 aa16.23■□□□□ 0.19
UBE2D4-206ENST00000446008 ZNF777Q9ULD5 760 aaPredicted RBP16.23■□□□□ 0.19
UBE2D4-206ENST00000446008 CLTCQ00610 1675 aaKnown RBP16.23■□□□□ 0.19
UBE2D4-206ENST00000446008 PLXNC1O60486 1568 aa16.22■□□□□ 0.19
UBE2D4-206ENST00000446008 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
UBE2D4-206ENST00000446008 SYCP2Q9BX26 1530 aa16.22■□□□□ 0.19
UBE2D4-206ENST00000446008 GPATCH8Q9UKJ3 1502 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-206ENST00000446008 MYO3AQ8NEV4 1616 aa16.22■□□□□ 0.19
UBE2D4-206ENST00000446008 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.19
UBE2D4-206ENST00000446008 KIAA1107Q9UPP5 1409 aa16.21■□□□□ 0.19
UBE2D4-206ENST00000446008 ATP7AQ04656 1500 aa16.21■□□□□ 0.19
UBE2D4-206ENST00000446008 A2MP01023 1474 aa16.2■□□□□ 0.18
UBE2D4-206ENST00000446008 INO80Q9ULG1 1556 aaPredicted RBP16.19■□□□□ 0.18
UBE2D4-206ENST00000446008 PLEKHH2Q8IVE3 1493 aa16.19■□□□□ 0.18
UBE2D4-206ENST00000446008 FYCO1Q9BQS8 1478 aa16.18■□□□□ 0.18
UBE2D4-206ENST00000446008 GGT6Q6P531 493 aa16.18■□□□□ 0.18
UBE2D4-206ENST00000446008 CFDP1Q9UEE9 299 aaPredicted RBP16.15■□□□□ 0.18
UBE2D4-206ENST00000446008 DNMT1P26358 1616 aaKnown RBP16.15■□□□□ 0.18
UBE2D4-206ENST00000446008 A2ML1A8K2U0 1454 aa16.15■□□□□ 0.18
UBE2D4-206ENST00000446008 ADGBQ8N7X0 1667 aa16.14■□□□□ 0.18
UBE2D4-206ENST00000446008 CCNB3Q8WWL7 1395 aa16.12■□□□□ 0.17
UBE2D4-206ENST00000446008 CPS1P31327 1500 aa16.11■□□□□ 0.17
UBE2D4-206ENST00000446008 TOM1O60784 492 aa16.11■□□□□ 0.17
UBE2D4-206ENST00000446008 HSPA1LP34931 641 aa16.11■□□□□ 0.17
UBE2D4-206ENST00000446008 POLR1AO95602 1720 aaPredicted RBP16.1■□□□□ 0.17
UBE2D4-206ENST00000446008 RTEL1-TNFRSF6BF6WH68 1400 aa16.1■□□□□ 0.17
UBE2D4-206ENST00000446008 MED1Q15648 1581 aaPredicted RBP16.09■□□□□ 0.17
UBE2D4-206ENST00000446008 SHANK2Q9UPX8 1470 aa16.09■□□□□ 0.17
UBE2D4-206ENST00000446008 DHX29Q7Z478 1369 aaKnown RBP16.08■□□□□ 0.16
UBE2D4-206ENST00000446008 NEURL4Q96JN8 1562 aa16.08■□□□□ 0.16
UBE2D4-206ENST00000446008 PIP4K2BP78356 416 aa16.07■□□□□ 0.16
UBE2D4-206ENST00000446008 MBD5Q9P267 1494 aa16.07■□□□□ 0.16
UBE2D4-206ENST00000446008 TNRQ92752 1358 aa16.06■□□□□ 0.16
UBE2D4-206ENST00000446008 FAM135AQ9P2D6 1515 aa16.05■□□□□ 0.16
UBE2D4-206ENST00000446008 MTUS2Q5JR59 1369 aa16.05■□□□□ 0.16
UBE2D4-206ENST00000446008 ZNF644Q9H582 1327 aaPredicted RBP16.05■□□□□ 0.16
UBE2D4-206ENST00000446008 FBXO31Q5XUX0 539 aaPredicted RBP16.05■□□□□ 0.16
UBE2D4-206ENST00000446008 PZPP20742 1482 aa16.04■□□□□ 0.16
UBE2D4-206ENST00000446008 ANKLE2Q86XL3 938 aa16.04■□□□□ 0.16
UBE2D4-206ENST00000446008 MED14O60244 1454 aa16.03■□□□□ 0.16
UBE2D4-206ENST00000446008 TIAM1Q13009 1591 aa16.02■□□□□ 0.16
UBE2D4-206ENST00000446008 VWDEQ8N2E2 1590 aa16.02■□□□□ 0.16
UBE2D4-206ENST00000446008 KIF3BO15066 747 aa16.02■□□□□ 0.16
UBE2D4-206ENST00000446008 THEMISQ8N1K5 641 aaPredicted RBP16.02■□□□□ 0.16
UBE2D4-206ENST00000446008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBE2D4-206ENST00000446008 KDM5DQ9BY66 1539 aa16.01■□□□□ 0.15
UBE2D4-206ENST00000446008 MIA2Q96PC5 1412 aa16.01■□□□□ 0.15
UBE2D4-206ENST00000446008 DEPDC5O75140 1603 aa16.01■□□□□ 0.15
UBE2D4-206ENST00000446008 NLRP1Q9C000 1473 aa16■□□□□ 0.15
UBE2D4-206ENST00000446008 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
UBE2D4-206ENST00000446008 ALKQ9UM73 1620 aa16■□□□□ 0.15
UBE2D4-206ENST00000446008 WASHC2CQ9Y4E1 1318 aa15.99■□□□□ 0.15
UBE2D4-206ENST00000446008 RSPH4AQ5TD94 716 aa15.99■□□□□ 0.15
UBE2D4-206ENST00000446008 NPHP4O75161 1426 aaPredicted RBP15.98■□□□□ 0.15
UBE2D4-206ENST00000446008 CEP162Q5TB80 1403 aa15.98■□□□□ 0.15
UBE2D4-206ENST00000446008 UGGT1Q9NYU2 1555 aa15.98■□□□□ 0.15
UBE2D4-206ENST00000446008 EHBP1L1Q8N3D4 1523 aa15.98■□□□□ 0.15
UBE2D4-206ENST00000446008 CCDC141Q6ZP82 1450 aa15.96■□□□□ 0.14
UBE2D4-206ENST00000446008 IQGAP1P46940 1657 aa15.95■□□□□ 0.14
UBE2D4-206ENST00000446008 STRCP1A6NGW2 1772 aa15.94■□□□□ 0.14
UBE2D4-206ENST00000446008 LRRC7Q96NW7 1537 aa15.93■□□□□ 0.14
UBE2D4-206ENST00000446008 CAMSAP2Q08AD1 1489 aa15.91■□□□□ 0.14
UBE2D4-206ENST00000446008 SYNMO15061 1565 aa15.9■□□□□ 0.14
UBE2D4-206ENST00000446008 RNF17Q9BXT8 1623 aaKnown RBP15.9■□□□□ 0.14
UBE2D4-206ENST00000446008 ARHGEF5Q12774 1597 aa15.89■□□□□ 0.13
UBE2D4-206ENST00000446008 TSPY4P0CV99 314 aa15.89■□□□□ 0.13
UBE2D4-206ENST00000446008 TSPY10P0CW01 314 aa15.89■□□□□ 0.13
UBE2D4-206ENST00000446008 ZC3H13Q5T200 1668 aaKnown RBP15.87■□□□□ 0.13
UBE2D4-206ENST00000446008 NCOA2Q15596 1464 aa15.87■□□□□ 0.13
UBE2D4-206ENST00000446008 ABCC3O15438 1527 aa15.86■□□□□ 0.13
UBE2D4-206ENST00000446008 RGS17Q9UGC6 210 aaPredicted RBP15.86■□□□□ 0.13
UBE2D4-206ENST00000446008 CFAP65Q6ZU64 1925 aaKnown RBP15.85■□□□□ 0.13
UBE2D4-206ENST00000446008 ERVK-7P63135 1459 aa15.84■□□□□ 0.13
UBE2D4-206ENST00000446008 UBR1Q8IWV7 1749 aa15.83■□□□□ 0.13
UBE2D4-206ENST00000446008 MAST1Q9Y2H9 1570 aa15.83■□□□□ 0.12
UBE2D4-206ENST00000446008 EIF2AK4Q9P2K8 1649 aaKnown RBP15.83■□□□□ 0.12
UBE2D4-206ENST00000446008 XIRP1Q702N8 1843 aaKnown RBP15.82■□□□□ 0.12
UBE2D4-206ENST00000446008 SCAF11Q99590 1463 aaKnown RBP15.81■□□□□ 0.12
UBE2D4-206ENST00000446008 ARHGAP23Q9P227 1491 aa15.81■□□□□ 0.12
UBE2D4-206ENST00000446008 SLIT1O75093 1534 aa15.8■□□□□ 0.12
UBE2D4-206ENST00000446008 LTKP29376 864 aa15.8■□□□□ 0.12
UBE2D4-206ENST00000446008 MROH1Q8NDA8 1641 aa15.79■□□□□ 0.12
UBE2D4-206ENST00000446008 MKRN4PQ13434 485 aaPredicted RBP15.79■□□□□ 0.12
UBE2D4-206ENST00000446008 FAM135BQ49AJ0 1406 aa15.78■□□□□ 0.12
UBE2D4-206ENST00000446008 CEP152O94986 1710 aa15.78■□□□□ 0.12
UBE2D4-206ENST00000446008 TXNDC2Q86VQ3 553 aa15.78■□□□□ 0.12
UBE2D4-206ENST00000446008 ARHGAP31Q2M1Z3 1444 aa15.77■□□□□ 0.11
UBE2D4-206ENST00000446008 EID1Q9Y6B2 187 aa15.75■□□□□ 0.11
UBE2D4-206ENST00000446008 DUOX2Q9NRD8 1548 aa15.73■□□□□ 0.11
UBE2D4-206ENST00000446008 POTEAQ6S8J7 498 aa15.73■□□□□ 0.11
UBE2D4-206ENST00000446008 LRRC9Q6ZRR7 1453 aa15.72■□□□□ 0.11
UBE2D4-206ENST00000446008 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
UBE2D4-206ENST00000446008 TMEM2Q9UHN6 1383 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms