RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 HDGFP51858 240 aaKnown RBP10.11□□□□□ -0.79
RIF1-205ENST00000444746 CENPJQ9HC77 1338 aaPredicted RBP10.11□□□□□ -0.79
RIF1-205ENST00000444746 TIMELESSQ9UNS1 1208 aa10.11□□□□□ -0.79
RIF1-205ENST00000444746 DRC7Q8IY82 874 aa10.11□□□□□ -0.79
RIF1-205ENST00000444746 ATAD2BQ9ULI0 1458 aa10.11□□□□□ -0.79
RIF1-205ENST00000444746 TOP2AP11388 1531 aaKnown RBP10.11□□□□□ -0.79
RIF1-205ENST00000444746 RWDD1Q9H446 243 aaPredicted RBP10.11□□□□□ -0.79
RIF1-205ENST00000444746 PRKRIP1Q9H875 184 aaPredicted RBP10.1□□□□□ -0.79
RIF1-205ENST00000444746 HMOX1P09601 288 aa10.1□□□□□ -0.79
RIF1-205ENST00000444746 MS4A1P11836 297 aa10.1□□□□□ -0.79
RIF1-205ENST00000444746 HSP90B1P14625 803 aaKnown RBP10.1□□□□□ -0.79
RIF1-205ENST00000444746 CABP2Q9NPB3 220 aa10.09□□□□□ -0.79
RIF1-205ENST00000444746 PDE4CQ08493 712 aa10.09□□□□□ -0.79
RIF1-205ENST00000444746 RILPL2Q969X0 211 aa10.08□□□□□ -0.8
RIF1-205ENST00000444746 IPO8O15397 1037 aaKnown RBP10.08□□□□□ -0.8
RIF1-205ENST00000444746 GGNBP2Q9H3C7 697 aa10.08□□□□□ -0.8
RIF1-205ENST00000444746 AQRO60306 1485 aaKnown RBP eCLIP10.08□□□□□ -0.84e-7■■■■■ 36.2
RIF1-205ENST00000444746 GLIPR1L2Q4G1C9 344 aa10.08□□□□□ -0.8
RIF1-205ENST00000444746 NLRP13Q86W25 1043 aa10.08□□□□□ -0.8
RIF1-205ENST00000444746 STK31Q9BXU1 1019 aa10.08□□□□□ -0.8
RIF1-205ENST00000444746 ANKRD45Q5TZF3 282 aa10.08□□□□□ -0.8
RIF1-205ENST00000444746 GORABQ5T7V8 394 aa10.07□□□□□ -0.8
RIF1-205ENST00000444746 FANCD2Q9BXW9 1451 aa10.07□□□□□ -0.8
RIF1-205ENST00000444746 CDCA7LQ96GN5 454 aa10.07□□□□□ -0.8
RIF1-205ENST00000444746 TERF2IPQ9NYB0 399 aa10.07□□□□□ -0.8
RIF1-205ENST00000444746 PHLDB1Q86UU1 1377 aa10.06□□□□□ -0.8
RIF1-205ENST00000444746 GNL2Q13823 731 aaKnown RBP10.06□□□□□ -0.8
RIF1-205ENST00000444746 KIAA1211Q6ZU35 1233 aa10.06□□□□□ -0.8
RIF1-205ENST00000444746 MYBBP1AQ9BQG0 1328 aaKnown RBP10.06□□□□□ -0.8
RIF1-205ENST00000444746 KDM4AO75164 1064 aa10.06□□□□□ -0.8
RIF1-205ENST00000444746 MCCP23508 829 aa10.06□□□□□ -0.8
RIF1-205ENST00000444746 CREBRFQ8IUR6 639 aa10.06□□□□□ -0.8
RIF1-205ENST00000444746 TOMM22Q9NS69 142 aa10.06□□□□□ -0.8
RIF1-205ENST00000444746 TAF7LQ5H9L4 462 aa10.06□□□□□ -0.8
RIF1-205ENST00000444746 USP47Q96K76 1375 aa10.06□□□□□ -0.8
RIF1-205ENST00000444746 IGF1RP08069 1367 aa10.05□□□□□ -0.8
RIF1-205ENST00000444746 EID1Q9Y6B2 187 aa10.05□□□□□ -0.8
RIF1-205ENST00000444746 PTPRGP23470 1445 aa10.04□□□□□ -0.8
RIF1-205ENST00000444746 FOSBP53539 338 aa10.04□□□□□ -0.8
RIF1-205ENST00000444746 RRP1P56182 461 aaKnown RBP10.04□□□□□ -0.8
RIF1-205ENST00000444746 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
RIF1-205ENST00000444746 CCDC144AA2RUR9 1427 aa10.04□□□□□ -0.8
RIF1-205ENST00000444746 PDE4AP27815 886 aa10.04□□□□□ -0.8
RIF1-205ENST00000444746 BCL11BQ9C0K0 894 aaPredicted RBP10.04□□□□□ -0.8
RIF1-205ENST00000444746 CCDC184Q52MB2 194 aa10.04□□□□□ -0.8
RIF1-205ENST00000444746 AFAP1Q8N556 730 aa10.04□□□□□ -0.8
RIF1-205ENST00000444746 NBPF1Q3BBV0 1214 aa10.03□□□□□ -0.8
RIF1-205ENST00000444746 CHMP4BQ9H444 224 aaKnown RBP10.03□□□□□ -0.8
RIF1-205ENST00000444746 KIF7Q2M1P5 1343 aa10.03□□□□□ -0.8
RIF1-205ENST00000444746 PMFBP1Q8TBY8 1022 aa10.03□□□□□ -0.8
RIF1-205ENST00000444746 PANK1Q8TE04 598 aa10.03□□□□□ -0.8
RIF1-205ENST00000444746 SYTL4Q96C24 671 aaPredicted RBP10.03□□□□□ -0.8
RIF1-205ENST00000444746 KIF15Q9NS87 1388 aa10.03□□□□□ -0.8
RIF1-205ENST00000444746 CCDC18Q5T9S5 1454 aa10.02□□□□□ -0.8
RIF1-205ENST00000444746 RIPK4P57078 832 aa10.02□□□□□ -0.81
RIF1-205ENST00000444746 FAM69CQ0P6D2 419 aa10.02□□□□□ -0.81
RIF1-205ENST00000444746 COG3Q96JB2 828 aa10.02□□□□□ -0.81
RIF1-205ENST00000444746 SKAP1Q86WV1 359 aa10.01□□□□□ -0.81
RIF1-205ENST00000444746 MSNP26038 577 aaKnown RBP10.01□□□□□ -0.81
RIF1-205ENST00000444746 EIF3AQ14152 1382 aaKnown RBP10.01□□□□□ -0.81
RIF1-205ENST00000444746 CFAP70Q5T0N1 1121 aa10□□□□□ -0.81
RIF1-205ENST00000444746 FGD5Q6ZNL6 1462 aa10□□□□□ -0.81
RIF1-205ENST00000444746 DNAJC5BQ9UF47 199 aa10□□□□□ -0.81
RIF1-205ENST00000444746 MSH5O43196 834 aa10□□□□□ -0.81
RIF1-205ENST00000444746 AIMP1Q12904 312 aaKnown RBP10□□□□□ -0.81
RIF1-205ENST00000444746 FBXW7Q969H0 707 aa9.99□□□□□ -0.81
RIF1-205ENST00000444746 ADAMTS8Q9UP79 889 aa9.99□□□□□ -0.81
RIF1-205ENST00000444746 C1orf115Q9H7X2 142 aa9.99□□□□□ -0.81
RIF1-205ENST00000444746 FAM177BA6PVY3 158 aa9.99□□□□□ -0.81
RIF1-205ENST00000444746 WASHC2AQ641Q2 1341 aa9.99□□□□□ -0.81
RIF1-205ENST00000444746 FRAT2O75474 233 aaPredicted RBP9.98□□□□□ -0.81
RIF1-205ENST00000444746 NBPF8Q3BBV2 869 aa9.98□□□□□ -0.81
RIF1-205ENST00000444746 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
RIF1-205ENST00000444746 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
RIF1-205ENST00000444746 EVA1CP58658 441 aa9.98□□□□□ -0.81
RIF1-205ENST00000444746 RAD21O60216 631 aa9.97□□□□□ -0.81
RIF1-205ENST00000444746 DIAPH1O60610 1272 aaKnown RBP9.97□□□□□ -0.81
RIF1-205ENST00000444746 LNPKQ9C0E8 428 aa9.97□□□□□ -0.81
RIF1-205ENST00000444746 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
RIF1-205ENST00000444746 CALD1Q05682 793 aaKnown RBP9.97□□□□□ -0.81
RIF1-205ENST00000444746 ZKSCAN2Q63HK3 967 aa9.96□□□□□ -0.81
RIF1-205ENST00000444746 GBP4Q96PP9 640 aa9.96□□□□□ -0.82
RIF1-205ENST00000444746 EVC2Q86UK5 1308 aa9.96□□□□□ -0.82
RIF1-205ENST00000444746 NESP48681 1621 aa9.96□□□□□ -0.82
RIF1-205ENST00000444746 GOLGA6L3A6NEY3 463 aa9.96□□□□□ -0.82
RIF1-205ENST00000444746 SMARCA4P51532 1647 aa9.95□□□□□ -0.82
RIF1-205ENST00000444746 C1orf141Q5JVX7 400 aa9.95□□□□□ -0.82
RIF1-205ENST00000444746 L1TD1Q5T7N2 865 aaKnown RBP9.95□□□□□ -0.82
RIF1-205ENST00000444746 TSR2Q969E8 191 aaKnown RBP9.95□□□□□ -0.82
RIF1-205ENST00000444746 CGNL1Q0VF96 1302 aa9.95□□□□□ -0.82
RIF1-205ENST00000444746 VGFO15240 615 aaPredicted RBP9.95□□□□□ -0.82
RIF1-205ENST00000444746 CCDC7Q96M83 1385 aa9.94□□□□□ -0.82
RIF1-205ENST00000444746 PSME1Q06323 249 aa9.94□□□□□ -0.82
RIF1-205ENST00000444746 TXNDC2Q86VQ3 553 aa9.94□□□□□ -0.82
RIF1-205ENST00000444746 RBM33Q96EV2 1170 aaKnown RBP9.94□□□□□ -0.82
RIF1-205ENST00000444746 KIF21BO75037 1637 aa9.94□□□□□ -0.82
RIF1-205ENST00000444746 G3V3G9 751 aa9.94□□□□□ -0.82
RIF1-205ENST00000444746 BCAR3O75815 825 aa9.94□□□□□ -0.82
RIF1-205ENST00000444746 DCAF8Q5TAQ9 597 aa9.94□□□□□ -0.82
RIF1-205ENST00000444746 GOLGA6L6A8MZA4 724 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms