RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 MROH2AA6NES4 1674 aa26.63■■□□□ 1.85
SMARCAL1-209ENST00000444508 CLTCQ00610 1675 aaKnown RBP26.63■■□□□ 1.85
SMARCAL1-209ENST00000444508 ITGAEP38570 1179 aa26.61■■□□□ 1.85
SMARCAL1-209ENST00000444508 CEBPAP49715 358 aaPredicted RBP26.61■■□□□ 1.85
SMARCAL1-209ENST00000444508 RNF17Q9BXT8 1623 aaKnown RBP26.61■■□□□ 1.85
SMARCAL1-209ENST00000444508 C3P01024 1663 aa26.6■■□□□ 1.85
SMARCAL1-209ENST00000444508 FAM135AQ9P2D6 1515 aa26.6■■□□□ 1.85
SMARCAL1-209ENST00000444508 PTPRKQ15262 1439 aa26.59■■□□□ 1.85
SMARCAL1-209ENST00000444508 KDM5DQ9BY66 1539 aa26.57■■□□□ 1.84
SMARCAL1-209ENST00000444508 WASHC2CQ9Y4E1 1318 aa26.56■■□□□ 1.84
SMARCAL1-209ENST00000444508 ZMYM3Q14202 1370 aa26.56■■□□□ 1.84
SMARCAL1-209ENST00000444508 ROCK1Q13464 1354 aa26.55■■□□□ 1.84
SMARCAL1-209ENST00000444508 ANKRD50Q9ULJ7 1429 aa26.51■■□□□ 1.83
SMARCAL1-209ENST00000444508 ZC3H13Q5T200 1668 aaKnown RBP26.5■■□□□ 1.83
SMARCAL1-209ENST00000444508 MROH1Q8NDA8 1641 aa26.5■■□□□ 1.83
SMARCAL1-209ENST00000444508 PREX1Q8TCU6 1659 aa26.48■■□□□ 1.83
SMARCAL1-209ENST00000444508 DEPDC5O75140 1603 aa26.48■■□□□ 1.83
SMARCAL1-209ENST00000444508 PRDM15P57071 1507 aaPredicted RBP26.48■■□□□ 1.83
SMARCAL1-209ENST00000444508 SETD1BQ9UPS6 1966 aaKnown RBP26.47■■□□□ 1.83
SMARCAL1-209ENST00000444508 ABCC3O15438 1527 aa26.47■■□□□ 1.83
SMARCAL1-209ENST00000444508 NPATQ14207 1427 aa26.47■■□□□ 1.83
SMARCAL1-209ENST00000444508 KANK1Q14678 1352 aa26.46■■□□□ 1.83
SMARCAL1-209ENST00000444508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.46■■□□□ 1.836e-7■■■■□ 22.5
SMARCAL1-209ENST00000444508 LMTK3Q96Q04 1460 aa26.45■■□□□ 1.82
SMARCAL1-209ENST00000444508 CEP152O94986 1710 aa26.43■■□□□ 1.82
SMARCAL1-209ENST00000444508 UHRF1BP1Q6BDS2 1440 aa26.43■■□□□ 1.82
SMARCAL1-209ENST00000444508 PZPP20742 1482 aa26.42■■□□□ 1.82
SMARCAL1-209ENST00000444508 CAMSAP1Q5T5Y3 1602 aa26.39■■□□□ 1.82
SMARCAL1-209ENST00000444508 VWDEQ8N2E2 1590 aa26.36■■□□□ 1.81
SMARCAL1-209ENST00000444508 FBXO31Q5XUX0 539 aaPredicted RBP26.35■■□□□ 1.81
SMARCAL1-209ENST00000444508 UNC13BO14795 1591 aa26.34■■□□□ 1.81
SMARCAL1-209ENST00000444508 LMTK2Q8IWU2 1503 aa26.34■■□□□ 1.81
SMARCAL1-209ENST00000444508 MYO3AQ8NEV4 1616 aa26.33■■□□□ 1.81
SMARCAL1-209ENST00000444508 HSPA2P54652 639 aa26.33■■□□□ 1.81
SMARCAL1-209ENST00000444508 TNRQ92752 1358 aa26.33■■□□□ 1.8
SMARCAL1-209ENST00000444508 GCC2Q8IWJ2 1684 aa26.32■■□□□ 1.8
SMARCAL1-209ENST00000444508 ARHGAP31Q2M1Z3 1444 aa26.31■■□□□ 1.8
SMARCAL1-209ENST00000444508 NAIPQ13075 1403 aa26.31■■□□□ 1.8
SMARCAL1-209ENST00000444508 HFM1A2PYH4 1435 aa26.3■■□□□ 1.8
SMARCAL1-209ENST00000444508 SPATA31D1Q6ZQQ2 1576 aa26.28■■□□□ 1.8
SMARCAL1-209ENST00000444508 ZNF142P52746 1687 aaPredicted RBP26.28■■□□□ 1.8
SMARCAL1-209ENST00000444508 ERVK-7P63135 1459 aa26.27■■□□□ 1.8
SMARCAL1-209ENST00000444508 CFAP65Q6ZU64 1925 aaKnown RBP26.26■■□□□ 1.79
SMARCAL1-209ENST00000444508 CEP170BQ9Y4F5 1589 aaPredicted RBP26.26■■□□□ 1.79
SMARCAL1-209ENST00000444508 EFCAB6Q5THR3 1501 aa26.26■■□□□ 1.79
SMARCAL1-209ENST00000444508 NUP155O75694 1391 aa26.24■■□□□ 1.79
SMARCAL1-209ENST00000444508 TET3O43151 1660 aa26.24■■□□□ 1.79
SMARCAL1-209ENST00000444508 IQGAP3Q86VI3 1631 aa26.24■■□□□ 1.79
SMARCAL1-209ENST00000444508 A2ML1A8K2U0 1454 aa26.23■■□□□ 1.79
SMARCAL1-209ENST00000444508 NLRP1Q9C000 1473 aa26.23■■□□□ 1.79
SMARCAL1-209ENST00000444508 RPRD2Q5VT52 1461 aaKnown RBP26.19■■□□□ 1.78
SMARCAL1-209ENST00000444508 UGGT1Q9NYU2 1555 aa26.13■■□□□ 1.77
SMARCAL1-209ENST00000444508 TRIM52Q96A61 297 aa26.13■■□□□ 1.77
SMARCAL1-209ENST00000444508 E9PCH4 1651 aa26.12■■□□□ 1.77
SMARCAL1-209ENST00000444508 STRCQ7RTU9 1775 aa26.12■■□□□ 1.77
SMARCAL1-209ENST00000444508 NOS1P29475 1434 aa26.12■■□□□ 1.77
SMARCAL1-209ENST00000444508 PLA2R1Q13018 1463 aa26.11■■□□□ 1.77
SMARCAL1-209ENST00000444508 THEMISQ8N1K5 641 aaPredicted RBP26.1■■□□□ 1.77
SMARCAL1-209ENST00000444508 SYNMO15061 1565 aa26.1■■□□□ 1.77
SMARCAL1-209ENST00000444508 DMRT2Q9Y5R5 561 aa26.09■■□□□ 1.77
SMARCAL1-209ENST00000444508 SETD5Q9C0A6 1442 aa26.07■■□□□ 1.76
SMARCAL1-209ENST00000444508 UBR1Q8IWV7 1749 aa26.05■■□□□ 1.76
SMARCAL1-209ENST00000444508 SLC52A1Q9NWF4 448 aa26.05■■□□□ 1.76
SMARCAL1-209ENST00000444508 PIK3C2BO00750 1634 aa26.05■■□□□ 1.76
SMARCAL1-209ENST00000444508 PKD2Q13563 968 aa26.04■■□□□ 1.76
SMARCAL1-209ENST00000444508 STAG3Q9UJ98 1225 aa26.04■■□□□ 1.76
SMARCAL1-209ENST00000444508 NCKAP5LQ9HCH0 1330 aa26.04■■□□□ 1.76
SMARCAL1-209ENST00000444508 ACIN1Q9UKV3 1341 aaKnown RBP26.04■■□□□ 1.76
SMARCAL1-209ENST00000444508 IDI1Q13907 227 aa26.03■■□□□ 1.76
SMARCAL1-209ENST00000444508 PTPRTO14522 1441 aa26.01■■□□□ 1.75
SMARCAL1-209ENST00000444508 SLC4A1APQ9BWU0 796 aaKnown RBP26.01■■□□□ 1.75
SMARCAL1-209ENST00000444508 POLR1AO95602 1720 aaPredicted RBP26■■□□□ 1.75
SMARCAL1-209ENST00000444508 KDM5AP29375 1690 aaKnown RBP26■■□□□ 1.75
SMARCAL1-209ENST00000444508 ANKLE2Q86XL3 938 aa25.99■■□□□ 1.75
SMARCAL1-209ENST00000444508 SPHKAPQ2M3C7 1700 aa25.98■■□□□ 1.75
SMARCAL1-209ENST00000444508 ADGRB3O60242 1522 aa25.98■■□□□ 1.75
SMARCAL1-209ENST00000444508 RAB3GAP2Q9H2M9 1393 aa25.97■■□□□ 1.75
SMARCAL1-209ENST00000444508 SLIT1O75093 1534 aa25.93■■□□□ 1.74
SMARCAL1-209ENST00000444508 NEURL4Q96JN8 1562 aa25.92■■□□□ 1.74
SMARCAL1-209ENST00000444508 TMEM2Q9UHN6 1383 aa25.92■■□□□ 1.74
SMARCAL1-209ENST00000444508 ARHGAP23Q9P227 1491 aa25.91■■□□□ 1.74
SMARCAL1-209ENST00000444508 EID1Q9Y6B2 187 aa25.91■■□□□ 1.74
SMARCAL1-209ENST00000444508 TRPM2O94759 1503 aa25.9■■□□□ 1.74
SMARCAL1-209ENST00000444508 CHGAP10645 457 aaKnown RBP25.9■■□□□ 1.74
SMARCAL1-209ENST00000444508 MPHOSPH9Q99550 1183 aa25.9■■□□□ 1.74
SMARCAL1-209ENST00000444508 TMEM131LA2VDJ0 1609 aa25.89■■□□□ 1.74
SMARCAL1-209ENST00000444508 SCAF11Q99590 1463 aaKnown RBP25.89■■□□□ 1.73
SMARCAL1-209ENST00000444508 MED14O60244 1454 aa25.88■■□□□ 1.73
SMARCAL1-209ENST00000444508 TXNDC2Q86VQ3 553 aa25.88■■□□□ 1.73
SMARCAL1-209ENST00000444508 NPHP4O75161 1426 aaPredicted RBP25.88■■□□□ 1.73
SMARCAL1-209ENST00000444508 MYO5BQ9ULV0 1848 aa25.87■■□□□ 1.73
SMARCAL1-209ENST00000444508 HRCP23327 699 aa25.86■■□□□ 1.73
SMARCAL1-209ENST00000444508 IQGAP1P46940 1657 aa25.85■■□□□ 1.73
SMARCAL1-209ENST00000444508 LTKP29376 864 aa25.84■■□□□ 1.73
SMARCAL1-209ENST00000444508 FOXD1Q16676 465 aa25.83■■□□□ 1.73
SMARCAL1-209ENST00000444508 CLTCL1P53675 1640 aa25.83■■□□□ 1.73
SMARCAL1-209ENST00000444508 HDGFP51858 240 aaKnown RBP25.82■■□□□ 1.72
SMARCAL1-209ENST00000444508 RIMS2Q9UQ26 1411 aa25.8■■□□□ 1.72
SMARCAL1-209ENST00000444508 KIF1BO60333 1816 aa25.79■■□□□ 1.72
SMARCAL1-209ENST00000444508 PPP1R15AO75807 674 aaPredicted RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms