RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 FBXO31Q5XUX0 539 aaPredicted RBP24.28■■□□□ 1.48
SYNCRIP-203ENST00000444272 SPAG9O60271 1321 aaKnown RBP24.28■■□□□ 1.48
SYNCRIP-203ENST00000444272 ATP7AQ04656 1500 aa24.27■■□□□ 1.48
SYNCRIP-203ENST00000444272 UGGT1Q9NYU2 1555 aa24.27■■□□□ 1.48
SYNCRIP-203ENST00000444272 ROBO1Q9Y6N7 1651 aa24.27■■□□□ 1.48
SYNCRIP-203ENST00000444272 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
SYNCRIP-203ENST00000444272 SYCP2Q9BX26 1530 aa24.22■■□□□ 1.47
SYNCRIP-203ENST00000444272 ZC3H13Q5T200 1668 aaKnown RBP24.21■■□□□ 1.47
SYNCRIP-203ENST00000444272 INO80Q9ULG1 1556 aaPredicted RBP24.21■■□□□ 1.47
SYNCRIP-203ENST00000444272 CDC42BPAQ5VT25 1732 aa24.21■■□□□ 1.47
SYNCRIP-203ENST00000444272 CSRNP3Q8WYN3 585 aa24.19■■□□□ 1.46
SYNCRIP-203ENST00000444272 PZPP20742 1482 aa24.19■■□□□ 1.46
SYNCRIP-203ENST00000444272 NLRP1Q9C000 1473 aa24.19■■□□□ 1.46
SYNCRIP-203ENST00000444272 ZNF772Q68DY9 489 aaPredicted RBP24.17■■□□□ 1.46
SYNCRIP-203ENST00000444272 ZNF777Q9ULD5 760 aaPredicted RBP24.17■■□□□ 1.46
SYNCRIP-203ENST00000444272 LRRIQ1Q96JM4 1722 aa24.17■■□□□ 1.46
SYNCRIP-203ENST00000444272 PHLPP1O60346 1717 aa24.15■■□□□ 1.46
SYNCRIP-203ENST00000444272 JCADQ9P266 1359 aa24.15■■□□□ 1.46
SYNCRIP-203ENST00000444272 ADGBQ8N7X0 1667 aa24.15■■□□□ 1.46
SYNCRIP-203ENST00000444272 HNRNPMP52272 730 aaKnown RBP eCLIP24.14■■□□□ 1.453e-7■■■■□ 21.5
SYNCRIP-203ENST00000444272 FMN1Q68DA7 1419 aa24.14■■□□□ 1.45
SYNCRIP-203ENST00000444272 MIA2Q96PC5 1412 aa24.13■■□□□ 1.45
SYNCRIP-203ENST00000444272 LRP6O75581 1613 aa24.13■■□□□ 1.45
SYNCRIP-203ENST00000444272 RXRBP28702 533 aa24.11■■□□□ 1.45
SYNCRIP-203ENST00000444272 MEX3CQ5U5Q3 659 aaKnown RBP24.1■■□□□ 1.45
SYNCRIP-203ENST00000444272 KDM5DQ9BY66 1539 aa24.1■■□□□ 1.45
SYNCRIP-203ENST00000444272 CDK12Q9NYV4 1490 aaPredicted RBP24.08■■□□□ 1.45
SYNCRIP-203ENST00000444272 SETBP1Q9Y6X0 1596 aa24.06■■□□□ 1.44
SYNCRIP-203ENST00000444272 LRRC9Q6ZRR7 1453 aa24.05■■□□□ 1.44
SYNCRIP-203ENST00000444272 TMEM94Q12767 1356 aa24.03■■□□□ 1.44
SYNCRIP-203ENST00000444272 ZRANB1Q9UGI0 708 aa24.02■■□□□ 1.44
SYNCRIP-203ENST00000444272 COL16A1Q07092 1604 aaPredicted RBP24.01■■□□□ 1.43
SYNCRIP-203ENST00000444272 SCAF11Q99590 1463 aaKnown RBP24■■□□□ 1.43
SYNCRIP-203ENST00000444272 SPATA31A6Q5VVP1 1343 aa24■■□□□ 1.43
SYNCRIP-203ENST00000444272 MAP3K1Q13233 1512 aa24■■□□□ 1.43
SYNCRIP-203ENST00000444272 WASHC2CQ9Y4E1 1318 aa23.98■■□□□ 1.43
SYNCRIP-203ENST00000444272 KIAA1107Q9UPP5 1409 aa23.98■■□□□ 1.43
SYNCRIP-203ENST00000444272 RGS12O14924 1447 aa23.95■■□□□ 1.42
SYNCRIP-203ENST00000444272 KIF3BO15066 747 aa23.95■■□□□ 1.42
SYNCRIP-203ENST00000444272 RBM33Q96EV2 1170 aaKnown RBP23.95■■□□□ 1.42
SYNCRIP-203ENST00000444272 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
SYNCRIP-203ENST00000444272 UBR1Q8IWV7 1749 aa23.94■■□□□ 1.42
SYNCRIP-203ENST00000444272 FOXD1Q16676 465 aa23.94■■□□□ 1.42
SYNCRIP-203ENST00000444272 GPATCH8Q9UKJ3 1502 aaKnown RBP23.93■■□□□ 1.42
SYNCRIP-203ENST00000444272 DHX29Q7Z478 1369 aaKnown RBP23.92■■□□□ 1.42
SYNCRIP-203ENST00000444272 NUTM2BA6NNL0 878 aaPredicted RBP23.92■■□□□ 1.42
SYNCRIP-203ENST00000444272 NUTM2EB1AL46 878 aaPredicted RBP23.92■■□□□ 1.42
SYNCRIP-203ENST00000444272 LTKP29376 864 aa23.92■■□□□ 1.42
SYNCRIP-203ENST00000444272 NUTM2DQ5VT03 806 aaPredicted RBP23.92■■□□□ 1.42
SYNCRIP-203ENST00000444272 NUTM2AQ8IVF1 878 aaPredicted RBP23.92■■□□□ 1.42
SYNCRIP-203ENST00000444272 ARHGAP35Q9NRY4 1499 aa23.92■■□□□ 1.42
SYNCRIP-203ENST00000444272 FGD6Q6ZV73 1430 aa23.92■■□□□ 1.42
SYNCRIP-203ENST00000444272 SHPRHQ149N8 1683 aa23.89■■□□□ 1.42
SYNCRIP-203ENST00000444272 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.41
SYNCRIP-203ENST00000444272 TXNDC2Q86VQ3 553 aa23.89■■□□□ 1.41
SYNCRIP-203ENST00000444272 PROSER2Q86WR7 435 aaPredicted RBP23.88■■□□□ 1.41
SYNCRIP-203ENST00000444272 SLAIN2Q9P270 581 aa23.88■■□□□ 1.41
SYNCRIP-203ENST00000444272 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
SYNCRIP-203ENST00000444272 ARHGAP23Q9P227 1491 aa23.86■■□□□ 1.41
SYNCRIP-203ENST00000444272 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
SYNCRIP-203ENST00000444272 AFF2P51816 1311 aa23.85■■□□□ 1.41
SYNCRIP-203ENST00000444272 MSH6P52701 1360 aa23.85■■□□□ 1.41
SYNCRIP-203ENST00000444272 SLIT1O75093 1534 aa23.84■■□□□ 1.41
SYNCRIP-203ENST00000444272 NCOA2Q15596 1464 aa23.84■■□□□ 1.41
SYNCRIP-203ENST00000444272 CFDP1Q9UEE9 299 aaPredicted RBP23.84■■□□□ 1.41
SYNCRIP-203ENST00000444272 PRDM15P57071 1507 aaPredicted RBP23.83■■□□□ 1.41
SYNCRIP-203ENST00000444272 EP400Q96L91 3159 aa23.83■■□□□ 1.4
SYNCRIP-203ENST00000444272 ERVK-7P63135 1459 aa23.81■■□□□ 1.4
SYNCRIP-203ENST00000444272 ATAD2Q6PL18 1390 aa23.81■■□□□ 1.4
SYNCRIP-203ENST00000444272 KCNA6P17658 529 aa23.81■■□□□ 1.4
SYNCRIP-203ENST00000444272 RTEL1-TNFRSF6BF6WH68 1400 aa23.8■■□□□ 1.4
SYNCRIP-203ENST00000444272 RBM6P78332 1123 aaKnown RBP23.79■■□□□ 1.4
SYNCRIP-203ENST00000444272 EID1Q9Y6B2 187 aa23.78■■□□□ 1.4
SYNCRIP-203ENST00000444272 EEA1Q15075 1411 aa23.77■■□□□ 1.4
SYNCRIP-203ENST00000444272 NKTRP30414 1462 aaKnown RBP23.75■■□□□ 1.39
SYNCRIP-203ENST00000444272 CFAP65Q6ZU64 1925 aaKnown RBP23.75■■□□□ 1.39
SYNCRIP-203ENST00000444272 AHDC1Q5TGY3 1603 aaPredicted RBP23.75■■□□□ 1.39
SYNCRIP-203ENST00000444272 QTRT2Q9H974 415 aaKnown RBP23.75■■□□□ 1.39
SYNCRIP-203ENST00000444272 MBD5Q9P267 1494 aa23.74■■□□□ 1.39
SYNCRIP-203ENST00000444272 ABCC3O15438 1527 aa23.73■■□□□ 1.39
SYNCRIP-203ENST00000444272 NWD1Q149M9 1564 aa23.73■■□□□ 1.39
SYNCRIP-203ENST00000444272 KDM5AP29375 1690 aaKnown RBP23.73■■□□□ 1.39
SYNCRIP-203ENST00000444272 ZNF644Q9H582 1327 aaPredicted RBP23.72■■□□□ 1.39
SYNCRIP-203ENST00000444272 LRP5O75197 1615 aa23.71■■□□□ 1.39
SYNCRIP-203ENST00000444272 CASKIN1Q8WXD9 1431 aa23.71■■□□□ 1.39
SYNCRIP-203ENST00000444272 CCNB3Q8WWL7 1395 aa23.71■■□□□ 1.39
SYNCRIP-203ENST00000444272 SLC26A8Q96RN1 970 aa23.7■■□□□ 1.38
SYNCRIP-203ENST00000444272 DIP2AQ14689 1571 aa23.69■■□□□ 1.38
SYNCRIP-203ENST00000444272 EHMT2Q96KQ7 1210 aa23.69■■□□□ 1.38
SYNCRIP-203ENST00000444272 UBTFP17480 764 aaKnown RBP23.66■■□□□ 1.38
SYNCRIP-203ENST00000444272 C8orf37Q96NL8 207 aa23.66■■□□□ 1.38
SYNCRIP-203ENST00000444272 TMEM2Q9UHN6 1383 aa23.65■■□□□ 1.38
SYNCRIP-203ENST00000444272 TET3O43151 1660 aa23.65■■□□□ 1.38
SYNCRIP-203ENST00000444272 NGLY1Q96IV0 654 aa23.64■■□□□ 1.37
SYNCRIP-203ENST00000444272 PIK3C2BO00750 1634 aa23.62■■□□□ 1.37
SYNCRIP-203ENST00000444272 CEP152O94986 1710 aa23.62■■□□□ 1.37
SYNCRIP-203ENST00000444272 CAMSAP2Q08AD1 1489 aa23.6■■□□□ 1.37
SYNCRIP-203ENST00000444272 CCDC141Q6ZP82 1450 aa23.58■■□□□ 1.37
SYNCRIP-203ENST00000444272 CCDC125Q86Z20 511 aa23.58■■□□□ 1.37
SYNCRIP-203ENST00000444272 IFFO2Q5TF58 517 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms