RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 RTEL1-TNFRSF6BF6WH68 1400 aa23.98■■□□□ 1.43
MRPL40-202ENST00000443660 THEMISQ8N1K5 641 aaPredicted RBP23.97■■□□□ 1.43
MRPL40-202ENST00000443660 WASHC2CQ9Y4E1 1318 aa23.97■■□□□ 1.43
MRPL40-202ENST00000443660 ADGBQ8N7X0 1667 aa23.96■■□□□ 1.43
MRPL40-202ENST00000443660 DNMT1P26358 1616 aaKnown RBP23.96■■□□□ 1.43
MRPL40-202ENST00000443660 CPS1P31327 1500 aa23.96■■□□□ 1.43
MRPL40-202ENST00000443660 SHANK2Q9UPX8 1470 aa23.95■■□□□ 1.42
MRPL40-202ENST00000443660 MBD5Q9P267 1494 aa23.94■■□□□ 1.42
MRPL40-202ENST00000443660 RSPH4AQ5TD94 716 aa23.93■■□□□ 1.42
MRPL40-202ENST00000443660 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
MRPL40-202ENST00000443660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.91■■□□□ 1.423e-7■■■□□ 14.6
MRPL40-202ENST00000443660 PZPP20742 1482 aa23.88■■□□□ 1.41
MRPL40-202ENST00000443660 MED1Q15648 1581 aaPredicted RBP23.87■■□□□ 1.41
MRPL40-202ENST00000443660 MIA2Q96PC5 1412 aa23.87■■□□□ 1.41
MRPL40-202ENST00000443660 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
MRPL40-202ENST00000443660 KDM5DQ9BY66 1539 aa23.85■■□□□ 1.41
MRPL40-202ENST00000443660 TSPY4P0CV99 314 aa23.85■■□□□ 1.41
MRPL40-202ENST00000443660 TSPY10P0CW01 314 aa23.85■■□□□ 1.41
MRPL40-202ENST00000443660 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
MRPL40-202ENST00000443660 NEURL4Q96JN8 1562 aa23.84■■□□□ 1.41
MRPL40-202ENST00000443660 NPHP4O75161 1426 aaPredicted RBP23.84■■□□□ 1.41
MRPL40-202ENST00000443660 NLRP1Q9C000 1473 aa23.83■■□□□ 1.41
MRPL40-202ENST00000443660 EHBP1L1Q8N3D4 1523 aa23.83■■□□□ 1.41
MRPL40-202ENST00000443660 FAM135AQ9P2D6 1515 aa23.83■■□□□ 1.41
MRPL40-202ENST00000443660 CCDC141Q6ZP82 1450 aa23.82■■□□□ 1.4
MRPL40-202ENST00000443660 POLR1AO95602 1720 aaPredicted RBP23.81■■□□□ 1.4
MRPL40-202ENST00000443660 UGGT1Q9NYU2 1555 aa23.81■■□□□ 1.4
MRPL40-202ENST00000443660 MED14O60244 1454 aa23.8■■□□□ 1.4
MRPL40-202ENST00000443660 SENP3Q9H4L4 574 aaPredicted RBP23.79■■□□□ 1.4
MRPL40-202ENST00000443660 VWDEQ8N2E2 1590 aa23.78■■□□□ 1.4
MRPL40-202ENST00000443660 CAMSAP2Q08AD1 1489 aa23.75■■□□□ 1.39
MRPL40-202ENST00000443660 DEPDC5O75140 1603 aa23.73■■□□□ 1.39
MRPL40-202ENST00000443660 NCOA2Q15596 1464 aa23.72■■□□□ 1.39
MRPL40-202ENST00000443660 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
MRPL40-202ENST00000443660 IQGAP1P46940 1657 aa23.67■■□□□ 1.38
MRPL40-202ENST00000443660 ALKQ9UM73 1620 aa23.66■■□□□ 1.38
MRPL40-202ENST00000443660 TXNDC2Q86VQ3 553 aa23.64■■□□□ 1.37
MRPL40-202ENST00000443660 ARHGEF5Q12774 1597 aa23.64■■□□□ 1.37
MRPL40-202ENST00000443660 EID1Q9Y6B2 187 aa23.62■■□□□ 1.37
MRPL40-202ENST00000443660 ABCC3O15438 1527 aa23.62■■□□□ 1.37
MRPL40-202ENST00000443660 ERVK-7P63135 1459 aa23.61■■□□□ 1.37
MRPL40-202ENST00000443660 LTKP29376 864 aa23.59■■□□□ 1.37
MRPL40-202ENST00000443660 RNF17Q9BXT8 1623 aaKnown RBP23.59■■□□□ 1.37
MRPL40-202ENST00000443660 SYNMO15061 1565 aa23.58■■□□□ 1.37
MRPL40-202ENST00000443660 SCAF11Q99590 1463 aaKnown RBP23.58■■□□□ 1.37
MRPL40-202ENST00000443660 RGS17Q9UGC6 210 aaPredicted RBP23.56■■□□□ 1.36
MRPL40-202ENST00000443660 ZC3H13Q5T200 1668 aaKnown RBP23.56■■□□□ 1.36
MRPL40-202ENST00000443660 STRCP1A6NGW2 1772 aa23.55■■□□□ 1.36
MRPL40-202ENST00000443660 STAG3Q9UJ98 1225 aa23.55■■□□□ 1.36
MRPL40-202ENST00000443660 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.36
MRPL40-202ENST00000443660 EIF2AK4Q9P2K8 1649 aaKnown RBP23.51■■□□□ 1.35
MRPL40-202ENST00000443660 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
MRPL40-202ENST00000443660 LRRC9Q6ZRR7 1453 aa23.49■■□□□ 1.35
MRPL40-202ENST00000443660 ARHGAP23Q9P227 1491 aa23.49■■□□□ 1.35
MRPL40-202ENST00000443660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.49■■□□□ 1.35
MRPL40-202ENST00000443660 SLIT1O75093 1534 aa23.49■■□□□ 1.35
MRPL40-202ENST00000443660 UBR1Q8IWV7 1749 aa23.48■■□□□ 1.35
MRPL40-202ENST00000443660 ARHGAP31Q2M1Z3 1444 aa23.48■■□□□ 1.35
MRPL40-202ENST00000443660 MYOM3Q5VTT5 1437 aa23.48■■□□□ 1.35
MRPL40-202ENST00000443660 DUOX2Q9NRD8 1548 aa23.47■■□□□ 1.35
MRPL40-202ENST00000443660 RRP7BPQ9NSQ0 103 aa23.46■■□□□ 1.35
MRPL40-202ENST00000443660 MROH1Q8NDA8 1641 aa23.45■■□□□ 1.34
MRPL40-202ENST00000443660 TMEM2Q9UHN6 1383 aa23.45■■□□□ 1.34
MRPL40-202ENST00000443660 KCNA6P17658 529 aa23.45■■□□□ 1.34
MRPL40-202ENST00000443660 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
MRPL40-202ENST00000443660 TMEM94Q12767 1356 aa23.44■■□□□ 1.34
MRPL40-202ENST00000443660 KANK4Q5T7N3 995 aaPredicted RBP23.44■■□□□ 1.34
MRPL40-202ENST00000443660 KANK1Q14678 1352 aa23.43■■□□□ 1.34
MRPL40-202ENST00000443660 KIF15Q9NS87 1388 aa23.43■■□□□ 1.34
MRPL40-202ENST00000443660 POTEAQ6S8J7 498 aa23.43■■□□□ 1.34
MRPL40-202ENST00000443660 CEP152O94986 1710 aa23.42■■□□□ 1.34
MRPL40-202ENST00000443660 SLC26A8Q96RN1 970 aa23.41■■□□□ 1.34
MRPL40-202ENST00000443660 CFAP65Q6ZU64 1925 aaKnown RBP23.41■■□□□ 1.34
MRPL40-202ENST00000443660 IDI1Q13907 227 aa23.4■■□□□ 1.34
MRPL40-202ENST00000443660 VPS8Q8N3P4 1428 aa23.4■■□□□ 1.34
MRPL40-202ENST00000443660 BCANQ96GW7 911 aa23.39■■□□□ 1.33
MRPL40-202ENST00000443660 ERBINQ96RT1 1412 aa23.39■■□□□ 1.33
MRPL40-202ENST00000443660 RBM33Q96EV2 1170 aaKnown RBP23.38■■□□□ 1.33
MRPL40-202ENST00000443660 PRDM15P57071 1507 aaPredicted RBP23.35■■□□□ 1.33
MRPL40-202ENST00000443660 EFCAB6Q5THR3 1501 aa23.33■■□□□ 1.33
MRPL40-202ENST00000443660 PIK3C2BO00750 1634 aa23.33■■□□□ 1.33
MRPL40-202ENST00000443660 XIRP1Q702N8 1843 aaKnown RBP23.33■■□□□ 1.33
MRPL40-202ENST00000443660 SLAIN2Q9P270 581 aa23.33■■□□□ 1.33
MRPL40-202ENST00000443660 MAP3K1Q13233 1512 aa23.33■■□□□ 1.32
MRPL40-202ENST00000443660 ABCC5O15440 1437 aa23.33■■□□□ 1.32
MRPL40-202ENST00000443660 MSH6P52701 1360 aa23.32■■□□□ 1.32
MRPL40-202ENST00000443660 SLC52A1Q9NWF4 448 aa23.31■■□□□ 1.32
MRPL40-202ENST00000443660 APLP2Q06481 763 aa23.3■■□□□ 1.32
MRPL40-202ENST00000443660 CHIC2Q9UKJ5 165 aa23.29■■□□□ 1.32
MRPL40-202ENST00000443660 HDGFP51858 240 aaKnown RBP23.28■■□□□ 1.32
MRPL40-202ENST00000443660 ROBO1Q9Y6N7 1651 aa23.28■■□□□ 1.32
MRPL40-202ENST00000443660 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
MRPL40-202ENST00000443660 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
MRPL40-202ENST00000443660 TET3O43151 1660 aa23.27■■□□□ 1.32
MRPL40-202ENST00000443660 JCADQ9P266 1359 aa23.27■■□□□ 1.31
MRPL40-202ENST00000443660 NKTRP30414 1462 aaKnown RBP23.25■■□□□ 1.31
MRPL40-202ENST00000443660 KDM5AP29375 1690 aaKnown RBP23.25■■□□□ 1.31
MRPL40-202ENST00000443660 DAPK1P53355 1430 aa23.25■■□□□ 1.31
MRPL40-202ENST00000443660 LMTK2Q8IWU2 1503 aa23.24■■□□□ 1.31
MRPL40-202ENST00000443660 PPP1R15AO75807 674 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms