RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 GGT6Q6P531 493 aa22.99■■□□□ 1.27
CSNK1E-210ENST00000442216 CLTCQ00610 1675 aaKnown RBP22.99■■□□□ 1.27
CSNK1E-210ENST00000442216 SETD1BQ9UPS6 1966 aaKnown RBP22.98■■□□□ 1.27
CSNK1E-210ENST00000442216 RRP7BPQ9NSQ0 103 aa22.98■■□□□ 1.27
CSNK1E-210ENST00000442216 CHIC2Q9UKJ5 165 aa22.98■■□□□ 1.27
CSNK1E-210ENST00000442216 ROCK1Q13464 1354 aa22.96■■□□□ 1.27
CSNK1E-210ENST00000442216 PTPRKQ15262 1439 aa22.96■■□□□ 1.27
CSNK1E-210ENST00000442216 ZC3H13Q5T200 1668 aaKnown RBP22.93■■□□□ 1.26
CSNK1E-210ENST00000442216 KDM5DQ9BY66 1539 aa22.93■■□□□ 1.26
CSNK1E-210ENST00000442216 DEPDC5O75140 1603 aa22.92■■□□□ 1.26
CSNK1E-210ENST00000442216 MROH1Q8NDA8 1641 aa22.92■■□□□ 1.26
CSNK1E-210ENST00000442216 ZMYM3Q14202 1370 aa22.91■■□□□ 1.26
CSNK1E-210ENST00000442216 PRDM15P57071 1507 aaPredicted RBP22.89■■□□□ 1.26
CSNK1E-210ENST00000442216 PREX1Q8TCU6 1659 aa22.89■■□□□ 1.25
CSNK1E-210ENST00000442216 CEBPAP49715 358 aaPredicted RBP22.88■■□□□ 1.25
CSNK1E-210ENST00000442216 WASHC2CQ9Y4E1 1318 aa22.87■■□□□ 1.25
CSNK1E-210ENST00000442216 NPATQ14207 1427 aa22.87■■□□□ 1.25
CSNK1E-210ENST00000442216 ANKRD50Q9ULJ7 1429 aa22.87■■□□□ 1.25
CSNK1E-210ENST00000442216 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
CSNK1E-210ENST00000442216 ITGAEP38570 1179 aa22.85■■□□□ 1.25
CSNK1E-210ENST00000442216 ABCC3O15438 1527 aa22.85■■□□□ 1.25
CSNK1E-210ENST00000442216 CEP152O94986 1710 aa22.85■■□□□ 1.25
CSNK1E-210ENST00000442216 LMTK3Q96Q04 1460 aa22.82■■□□□ 1.24
CSNK1E-210ENST00000442216 VWDEQ8N2E2 1590 aa22.81■■□□□ 1.24
CSNK1E-210ENST00000442216 PZPP20742 1482 aa22.81■■□□□ 1.24
CSNK1E-210ENST00000442216 KANK1Q14678 1352 aa22.81■■□□□ 1.24
CSNK1E-210ENST00000442216 CAMSAP1Q5T5Y3 1602 aa22.81■■□□□ 1.24
CSNK1E-210ENST00000442216 GCC2Q8IWJ2 1684 aa22.79■■□□□ 1.24
CSNK1E-210ENST00000442216 UNC13BO14795 1591 aa22.78■■□□□ 1.24
CSNK1E-210ENST00000442216 UHRF1BP1Q6BDS2 1440 aa22.78■■□□□ 1.24
CSNK1E-210ENST00000442216 LMTK2Q8IWU2 1503 aa22.77■■□□□ 1.24
CSNK1E-210ENST00000442216 ARHGAP31Q2M1Z3 1444 aa22.75■■□□□ 1.23
CSNK1E-210ENST00000442216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.74■■□□□ 1.235e-9■□□□□ 10.5
CSNK1E-210ENST00000442216 CFAP65Q6ZU64 1925 aaKnown RBP22.74■■□□□ 1.23
CSNK1E-210ENST00000442216 ZNF142P52746 1687 aaPredicted RBP22.74■■□□□ 1.23
CSNK1E-210ENST00000442216 MYO3AQ8NEV4 1616 aa22.73■■□□□ 1.23
CSNK1E-210ENST00000442216 NAIPQ13075 1403 aa22.73■■□□□ 1.23
CSNK1E-210ENST00000442216 HFM1A2PYH4 1435 aa22.72■■□□□ 1.23
CSNK1E-210ENST00000442216 SPATA31D1Q6ZQQ2 1576 aa22.72■■□□□ 1.23
CSNK1E-210ENST00000442216 IQGAP3Q86VI3 1631 aa22.7■■□□□ 1.22
CSNK1E-210ENST00000442216 TET3O43151 1660 aa22.7■■□□□ 1.22
CSNK1E-210ENST00000442216 EFCAB6Q5THR3 1501 aa22.68■■□□□ 1.22
CSNK1E-210ENST00000442216 TNRQ92752 1358 aa22.68■■□□□ 1.22
CSNK1E-210ENST00000442216 FBXO31Q5XUX0 539 aaPredicted RBP22.68■■□□□ 1.22
CSNK1E-210ENST00000442216 CEP170BQ9Y4F5 1589 aaPredicted RBP22.67■■□□□ 1.22
CSNK1E-210ENST00000442216 ERVK-7P63135 1459 aa22.67■■□□□ 1.22
CSNK1E-210ENST00000442216 RPRD2Q5VT52 1461 aaKnown RBP22.66■■□□□ 1.22
CSNK1E-210ENST00000442216 NLRP1Q9C000 1473 aa22.66■■□□□ 1.22
CSNK1E-210ENST00000442216 A2ML1A8K2U0 1454 aa22.65■■□□□ 1.22
CSNK1E-210ENST00000442216 HSPA2P54652 639 aa22.63■■□□□ 1.21
CSNK1E-210ENST00000442216 NUP155O75694 1391 aa22.62■■□□□ 1.21
CSNK1E-210ENST00000442216 E9PCH4 1651 aa22.59■■□□□ 1.21
CSNK1E-210ENST00000442216 STRCQ7RTU9 1775 aa22.59■■□□□ 1.21
CSNK1E-210ENST00000442216 NOS1P29475 1434 aa22.57■■□□□ 1.2
CSNK1E-210ENST00000442216 PLA2R1Q13018 1463 aa22.57■■□□□ 1.2
CSNK1E-210ENST00000442216 ACIN1Q9UKV3 1341 aaKnown RBP22.57■■□□□ 1.2
CSNK1E-210ENST00000442216 UGGT1Q9NYU2 1555 aa22.55■■□□□ 1.2
CSNK1E-210ENST00000442216 KDM5AP29375 1690 aaKnown RBP22.55■■□□□ 1.2
CSNK1E-210ENST00000442216 SYNMO15061 1565 aa22.54■■□□□ 1.2
CSNK1E-210ENST00000442216 UBR1Q8IWV7 1749 aa22.53■■□□□ 1.2
CSNK1E-210ENST00000442216 SETD5Q9C0A6 1442 aa22.51■■□□□ 1.19
CSNK1E-210ENST00000442216 THEMISQ8N1K5 641 aaPredicted RBP22.51■■□□□ 1.19
CSNK1E-210ENST00000442216 PIK3C2BO00750 1634 aa22.5■■□□□ 1.19
CSNK1E-210ENST00000442216 SLC52A1Q9NWF4 448 aa22.5■■□□□ 1.19
CSNK1E-210ENST00000442216 DMRT2Q9Y5R5 561 aa22.5■■□□□ 1.19
CSNK1E-210ENST00000442216 POLR1AO95602 1720 aaPredicted RBP22.49■■□□□ 1.19
CSNK1E-210ENST00000442216 PKD2Q13563 968 aa22.48■■□□□ 1.19
CSNK1E-210ENST00000442216 TRIM52Q96A61 297 aa22.48■■□□□ 1.19
CSNK1E-210ENST00000442216 SPHKAPQ2M3C7 1700 aa22.48■■□□□ 1.19
CSNK1E-210ENST00000442216 PTPRTO14522 1441 aa22.46■■□□□ 1.19
CSNK1E-210ENST00000442216 IDI1Q13907 227 aa22.45■■□□□ 1.18
CSNK1E-210ENST00000442216 ADGRB3O60242 1522 aa22.42■■□□□ 1.18
CSNK1E-210ENST00000442216 SLIT1O75093 1534 aa22.42■■□□□ 1.18
CSNK1E-210ENST00000442216 RAB3GAP2Q9H2M9 1393 aa22.41■■□□□ 1.18
CSNK1E-210ENST00000442216 HRCP23327 699 aa22.41■■□□□ 1.18
CSNK1E-210ENST00000442216 SLC4A1APQ9BWU0 796 aaKnown RBP22.41■■□□□ 1.18
CSNK1E-210ENST00000442216 ARHGAP23Q9P227 1491 aa22.41■■□□□ 1.18
CSNK1E-210ENST00000442216 ANKLE2Q86XL3 938 aa22.4■■□□□ 1.18
CSNK1E-210ENST00000442216 STAG3Q9UJ98 1225 aa22.4■■□□□ 1.18
CSNK1E-210ENST00000442216 MYO5BQ9ULV0 1848 aa22.4■■□□□ 1.18
CSNK1E-210ENST00000442216 NCKAP5LQ9HCH0 1330 aa22.39■■□□□ 1.18
CSNK1E-210ENST00000442216 TMEM131LA2VDJ0 1609 aa22.39■■□□□ 1.17
CSNK1E-210ENST00000442216 NEURL4Q96JN8 1562 aa22.38■■□□□ 1.17
CSNK1E-210ENST00000442216 TRPM2O94759 1503 aa22.37■■□□□ 1.17
CSNK1E-210ENST00000442216 MED14O60244 1454 aa22.37■■□□□ 1.17
CSNK1E-210ENST00000442216 TMEM2Q9UHN6 1383 aa22.36■■□□□ 1.17
CSNK1E-210ENST00000442216 MPHOSPH9Q99550 1183 aa22.35■■□□□ 1.17
CSNK1E-210ENST00000442216 SCAF11Q99590 1463 aaKnown RBP22.34■■□□□ 1.17
CSNK1E-210ENST00000442216 KIF1BO60333 1816 aa22.34■■□□□ 1.17
CSNK1E-210ENST00000442216 IQGAP1P46940 1657 aa22.33■■□□□ 1.17
CSNK1E-210ENST00000442216 EID1Q9Y6B2 187 aa22.32■■□□□ 1.16
CSNK1E-210ENST00000442216 CLTCL1P53675 1640 aa22.31■■□□□ 1.16
CSNK1E-210ENST00000442216 NPHP4O75161 1426 aaPredicted RBP22.31■■□□□ 1.16
CSNK1E-210ENST00000442216 TXNDC2Q86VQ3 553 aa22.29■■□□□ 1.16
CSNK1E-210ENST00000442216 LTKP29376 864 aa22.28■■□□□ 1.16
CSNK1E-210ENST00000442216 HDGFP51858 240 aaKnown RBP22.28■■□□□ 1.16
CSNK1E-210ENST00000442216 ZFYVE9O95405 1425 aa22.27■■□□□ 1.16
CSNK1E-210ENST00000442216 CHGAP10645 457 aaKnown RBP22.25■■□□□ 1.15
CSNK1E-210ENST00000442216 TRIM26Q12899 539 aaPredicted RBP22.25■■□□□ 1.15
CSNK1E-210ENST00000442216 RIMS2Q9UQ26 1411 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms