RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 BCORL1Q5H9F3 1711 aa23.38■■□□□ 1.33
MCF2L-217ENST00000441756 DEPDC5O75140 1603 aa23.37■■□□□ 1.33
MCF2L-217ENST00000441756 ATP10AO60312 1499 aa23.36■■□□□ 1.33
MCF2L-217ENST00000441756 NUP155O75694 1391 aa23.35■■□□□ 1.33
MCF2L-217ENST00000441756 RNF17Q9BXT8 1623 aaKnown RBP23.34■■□□□ 1.33
MCF2L-217ENST00000441756 ZEB1P37275 1124 aaPredicted RBP23.34■■□□□ 1.33
MCF2L-217ENST00000441756 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.33
MCF2L-217ENST00000441756 PZPP20742 1482 aa23.33■■□□□ 1.33
MCF2L-217ENST00000441756 KANK1Q14678 1352 aa23.33■■□□□ 1.33
MCF2L-217ENST00000441756 PRDM15P57071 1507 aaPredicted RBP23.33■■□□□ 1.32
MCF2L-217ENST00000441756 MPHOSPH9Q99550 1183 aa23.31■■□□□ 1.32
MCF2L-217ENST00000441756 SLC4A1APQ9BWU0 796 aaKnown RBP23.31■■□□□ 1.32
MCF2L-217ENST00000441756 FAM135AQ9P2D6 1515 aa23.31■■□□□ 1.32
MCF2L-217ENST00000441756 KIF3BO15066 747 aa23.3■■□□□ 1.32
MCF2L-217ENST00000441756 AGLP35573 1532 aa23.28■■□□□ 1.32
MCF2L-217ENST00000441756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.26■■□□□ 1.317e-8■■□□□ 11.5
MCF2L-217ENST00000441756 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
MCF2L-217ENST00000441756 VWDEQ8N2E2 1590 aa23.25■■□□□ 1.31
MCF2L-217ENST00000441756 TET3O43151 1660 aa23.22■■□□□ 1.31
MCF2L-217ENST00000441756 ZC3H13Q5T200 1668 aaKnown RBP23.21■■□□□ 1.31
MCF2L-217ENST00000441756 LMTK2Q8IWU2 1503 aa23.2■■□□□ 1.3
MCF2L-217ENST00000441756 PKD2Q13563 968 aa23.19■■□□□ 1.3
MCF2L-217ENST00000441756 GGT6Q6P531 493 aa23.16■■□□□ 1.3
MCF2L-217ENST00000441756 PPP6R1Q9UPN7 881 aa23.15■■□□□ 1.3
MCF2L-217ENST00000441756 EFCAB6Q5THR3 1501 aa23.14■■□□□ 1.3
MCF2L-217ENST00000441756 ANKRD30BQ9BXX2 1392 aa23.14■■□□□ 1.29
MCF2L-217ENST00000441756 CEP152O94986 1710 aa23.13■■□□□ 1.29
MCF2L-217ENST00000441756 ABCC3O15438 1527 aa23.13■■□□□ 1.29
MCF2L-217ENST00000441756 WASHC2CQ9Y4E1 1318 aa23.11■■□□□ 1.29
MCF2L-217ENST00000441756 RPRD2Q5VT52 1461 aaKnown RBP23.11■■□□□ 1.29
MCF2L-217ENST00000441756 E9PCH4 1651 aa23.1■■□□□ 1.29
MCF2L-217ENST00000441756 SIGLEC1Q9BZZ2 1709 aa23.1■■□□□ 1.29
MCF2L-217ENST00000441756 CAMSAP1Q5T5Y3 1602 aa23.09■■□□□ 1.29
MCF2L-217ENST00000441756 FOXD1Q16676 465 aa23.09■■□□□ 1.29
MCF2L-217ENST00000441756 ARID4BQ4LE39 1312 aaPredicted RBP23.08■■□□□ 1.29
MCF2L-217ENST00000441756 TIMELESSQ9UNS1 1208 aa23.08■■□□□ 1.29
MCF2L-217ENST00000441756 ARHGAP31Q2M1Z3 1444 aa23.05■■□□□ 1.28
MCF2L-217ENST00000441756 SPHKAPQ2M3C7 1700 aa23.05■■□□□ 1.28
MCF2L-217ENST00000441756 CCDC144AA2RUR9 1427 aa23.03■■□□□ 1.28
MCF2L-217ENST00000441756 NEUROD1Q13562 356 aa23.03■■□□□ 1.28
MCF2L-217ENST00000441756 SIN3AQ96ST3 1273 aa23.03■■□□□ 1.28
MCF2L-217ENST00000441756 ESF1Q9H501 851 aaKnown RBP23.03■■□□□ 1.28
MCF2L-217ENST00000441756 TRPM2O94759 1503 aa23.03■■□□□ 1.28
MCF2L-217ENST00000441756 TONSLQ96HA7 1378 aa23.02■■□□□ 1.28
MCF2L-217ENST00000441756 PTPRTO14522 1441 aa23.01■■□□□ 1.27
MCF2L-217ENST00000441756 CNTLNQ9NXG0 1405 aa23.01■■□□□ 1.27
MCF2L-217ENST00000441756 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
MCF2L-217ENST00000441756 NPATQ14207 1427 aa22.99■■□□□ 1.27
MCF2L-217ENST00000441756 MLECQ14165 292 aa22.98■■□□□ 1.27
MCF2L-217ENST00000441756 PLA2R1Q13018 1463 aa22.97■■□□□ 1.27
MCF2L-217ENST00000441756 MROH2AA6NES4 1674 aa22.96■■□□□ 1.27
MCF2L-217ENST00000441756 NOS1P29475 1434 aa22.91■■□□□ 1.26
MCF2L-217ENST00000441756 FER1L4A9Z1Z3 1794 aa22.91■■□□□ 1.26
MCF2L-217ENST00000441756 PREX1Q8TCU6 1659 aa22.91■■□□□ 1.26
MCF2L-217ENST00000441756 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
MCF2L-217ENST00000441756 CLTCL1P53675 1640 aa22.9■■□□□ 1.26
MCF2L-217ENST00000441756 NEURL4Q96JN8 1562 aa22.89■■□□□ 1.25
MCF2L-217ENST00000441756 ERVK-7P63135 1459 aa22.88■■□□□ 1.25
MCF2L-217ENST00000441756 ZMYM3Q14202 1370 aa22.86■■□□□ 1.25
MCF2L-217ENST00000441756 SPATA31D1Q6ZQQ2 1576 aa22.85■■□□□ 1.25
MCF2L-217ENST00000441756 KIF1BO60333 1816 aa22.85■■□□□ 1.25
MCF2L-217ENST00000441756 SYNMO15061 1565 aa22.84■■□□□ 1.25
MCF2L-217ENST00000441756 PIK3C2BO00750 1634 aa22.84■■□□□ 1.25
MCF2L-217ENST00000441756 SLC52A1Q9NWF4 448 aa22.82■■□□□ 1.24
MCF2L-217ENST00000441756 L3MBTL2Q969R5 705 aa22.81■■□□□ 1.24
MCF2L-217ENST00000441756 SPATA31E1Q6ZUB1 1445 aa22.81■■□□□ 1.24
MCF2L-217ENST00000441756 ADAMTSL3P82987 1691 aa22.81■■□□□ 1.24
MCF2L-217ENST00000441756 CFAP65Q6ZU64 1925 aaKnown RBP22.8■■□□□ 1.24
MCF2L-217ENST00000441756 UGGT1Q9NYU2 1555 aa22.8■■□□□ 1.24
MCF2L-217ENST00000441756 MADDQ8WXG6 1647 aa22.8■■□□□ 1.24
MCF2L-217ENST00000441756 PPP1R15AO75807 674 aaPredicted RBP22.8■■□□□ 1.24
MCF2L-217ENST00000441756 ADGRB3O60242 1522 aa22.79■■□□□ 1.24
MCF2L-217ENST00000441756 C3P01024 1663 aa22.77■■□□□ 1.24
MCF2L-217ENST00000441756 RIMS1Q86UR5 1692 aaKnown RBP22.77■■□□□ 1.24
MCF2L-217ENST00000441756 STAC3Q96MF2 364 aa22.76■■□□□ 1.23
MCF2L-217ENST00000441756 FBXO31Q5XUX0 539 aaPredicted RBP22.75■■□□□ 1.23
MCF2L-217ENST00000441756 TNRQ92752 1358 aa22.75■■□□□ 1.23
MCF2L-217ENST00000441756 RGL3Q3MIN7 710 aa22.72■■□□□ 1.23
MCF2L-217ENST00000441756 DCAF11Q8TEB1 546 aa22.71■■□□□ 1.23
MCF2L-217ENST00000441756 UHRF1BP1Q6BDS2 1440 aa22.71■■□□□ 1.23
MCF2L-217ENST00000441756 CHGAP10645 457 aaKnown RBP22.7■■□□□ 1.22
MCF2L-217ENST00000441756 NLRP1Q9C000 1473 aa22.7■■□□□ 1.22
MCF2L-217ENST00000441756 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
MCF2L-217ENST00000441756 IDI1Q13907 227 aa22.69■■□□□ 1.22
MCF2L-217ENST00000441756 KDM5AP29375 1690 aaKnown RBP22.68■■□□□ 1.22
MCF2L-217ENST00000441756 TMEM131LA2VDJ0 1609 aa22.68■■□□□ 1.22
MCF2L-217ENST00000441756 MYOM2P54296 1465 aa22.67■■□□□ 1.22
MCF2L-217ENST00000441756 ZNF326Q5BKZ1 582 aaKnown RBP22.67■■□□□ 1.22
MCF2L-217ENST00000441756 IFT172Q9UG01 1749 aa22.67■■□□□ 1.22
MCF2L-217ENST00000441756 STAG3Q9UJ98 1225 aa22.66■■□□□ 1.22
MCF2L-217ENST00000441756 KDM2AQ9Y2K7 1162 aa22.64■■□□□ 1.21
MCF2L-217ENST00000441756 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.21
MCF2L-217ENST00000441756 PPLO60437 1756 aa22.63■■□□□ 1.21
MCF2L-217ENST00000441756 CEBPAP49715 358 aaPredicted RBP22.63■■□□□ 1.21
MCF2L-217ENST00000441756 RALGAPBQ86X10 1494 aa22.62■■□□□ 1.21
MCF2L-217ENST00000441756 MYO3AQ8NEV4 1616 aa22.6■■□□□ 1.21
MCF2L-217ENST00000441756 A2ML1A8K2U0 1454 aa22.6■■□□□ 1.21
MCF2L-217ENST00000441756 NEXMIFQ5QGS0 1516 aa22.6■■□□□ 1.21
MCF2L-217ENST00000441756 PTPRMP28827 1452 aa22.6■■□□□ 1.21
MCF2L-217ENST00000441756 NBPF8Q3BBV2 869 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms