RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 PPP6R1Q9UPN7 881 aa30.78■■■□□ 2.52
TSSC4-206ENST00000440813 EIF2AK4Q9P2K8 1649 aaKnown RBP30.77■■■□□ 2.52
TSSC4-206ENST00000440813 ERBINQ96RT1 1412 aa30.76■■■□□ 2.51
TSSC4-206ENST00000440813 CLTCQ00610 1675 aaKnown RBP30.76■■■□□ 2.51
TSSC4-206ENST00000440813 C3P01024 1663 aa30.72■■■□□ 2.51
TSSC4-206ENST00000440813 ZMYM3Q14202 1370 aa30.72■■■□□ 2.51
TSSC4-206ENST00000440813 RNF17Q9BXT8 1623 aaKnown RBP30.72■■■□□ 2.51
TSSC4-206ENST00000440813 WASHC2CQ9Y4E1 1318 aa30.72■■■□□ 2.51
TSSC4-206ENST00000440813 ROCK1Q13464 1354 aa30.7■■■□□ 2.51
TSSC4-206ENST00000440813 MROH2AA6NES4 1674 aa30.7■■■□□ 2.5
TSSC4-206ENST00000440813 KDM5DQ9BY66 1539 aa30.68■■■□□ 2.5
TSSC4-206ENST00000440813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.67■■■□□ 2.5
TSSC4-206ENST00000440813 ANKRD50Q9ULJ7 1429 aa30.66■■■□□ 2.5
TSSC4-206ENST00000440813 MROH1Q8NDA8 1641 aa30.65■■■□□ 2.5
TSSC4-206ENST00000440813 FAM135AQ9P2D6 1515 aa30.63■■■□□ 2.49
TSSC4-206ENST00000440813 ABCC3O15438 1527 aa30.59■■■□□ 2.49
TSSC4-206ENST00000440813 DEPDC5O75140 1603 aa30.58■■■□□ 2.49
TSSC4-206ENST00000440813 PRDM15P57071 1507 aaPredicted RBP30.58■■■□□ 2.49
TSSC4-206ENST00000440813 CEP152O94986 1710 aa30.56■■■□□ 2.48
TSSC4-206ENST00000440813 KANK1Q14678 1352 aa30.56■■■□□ 2.48
TSSC4-206ENST00000440813 ZC3H13Q5T200 1668 aaKnown RBP30.56■■■□□ 2.48
TSSC4-206ENST00000440813 SETD1BQ9UPS6 1966 aaKnown RBP30.55■■■□□ 2.48
TSSC4-206ENST00000440813 LMTK3Q96Q04 1460 aa30.55■■■□□ 2.48
TSSC4-206ENST00000440813 NPATQ14207 1427 aa30.54■■■□□ 2.48
TSSC4-206ENST00000440813 FBXO31Q5XUX0 539 aaPredicted RBP30.53■■■□□ 2.48
TSSC4-206ENST00000440813 PREX1Q8TCU6 1659 aa30.52■■■□□ 2.48
TSSC4-206ENST00000440813 PZPP20742 1482 aa30.51■■■□□ 2.48
TSSC4-206ENST00000440813 UHRF1BP1Q6BDS2 1440 aa30.5■■■□□ 2.47
TSSC4-206ENST00000440813 CAMSAP1Q5T5Y3 1602 aa30.49■■■□□ 2.47
TSSC4-206ENST00000440813 HSPA2P54652 639 aa30.48■■■□□ 2.47
TSSC4-206ENST00000440813 NAIPQ13075 1403 aa30.47■■■□□ 2.47
TSSC4-206ENST00000440813 VWDEQ8N2E2 1590 aa30.47■■■□□ 2.47
TSSC4-206ENST00000440813 UNC13BO14795 1591 aa30.44■■■□□ 2.46
TSSC4-206ENST00000440813 HFM1A2PYH4 1435 aa30.43■■■□□ 2.46
TSSC4-206ENST00000440813 GCC2Q8IWJ2 1684 aa30.42■■■□□ 2.46
TSSC4-206ENST00000440813 TNRQ92752 1358 aa30.42■■■□□ 2.46
TSSC4-206ENST00000440813 LMTK2Q8IWU2 1503 aa30.42■■■□□ 2.46
TSSC4-206ENST00000440813 CFAP65Q6ZU64 1925 aaKnown RBP30.41■■■□□ 2.46
TSSC4-206ENST00000440813 ARHGAP31Q2M1Z3 1444 aa30.39■■■□□ 2.46
TSSC4-206ENST00000440813 MYO3AQ8NEV4 1616 aa30.39■■■□□ 2.46
TSSC4-206ENST00000440813 NUP155O75694 1391 aa30.39■■■□□ 2.45
TSSC4-206ENST00000440813 ERVK-7P63135 1459 aa30.38■■■□□ 2.45
TSSC4-206ENST00000440813 SPATA31D1Q6ZQQ2 1576 aa30.35■■■□□ 2.45
TSSC4-206ENST00000440813 EFCAB6Q5THR3 1501 aa30.34■■■□□ 2.45
TSSC4-206ENST00000440813 IQGAP3Q86VI3 1631 aa30.32■■■□□ 2.44
TSSC4-206ENST00000440813 CEP170BQ9Y4F5 1589 aaPredicted RBP30.32■■■□□ 2.44
TSSC4-206ENST00000440813 TET3O43151 1660 aa30.31■■■□□ 2.44
TSSC4-206ENST00000440813 ZNF142P52746 1687 aaPredicted RBP30.3■■■□□ 2.44
TSSC4-206ENST00000440813 TRIM52Q96A61 297 aa30.29■■■□□ 2.44
TSSC4-206ENST00000440813 A2ML1A8K2U0 1454 aa30.29■■■□□ 2.44
TSSC4-206ENST00000440813 NLRP1Q9C000 1473 aa30.27■■■□□ 2.44
TSSC4-206ENST00000440813 RPRD2Q5VT52 1461 aaKnown RBP30.24■■■□□ 2.43
TSSC4-206ENST00000440813 SETD5Q9C0A6 1442 aa30.22■■■□□ 2.43
TSSC4-206ENST00000440813 E9PCH4 1651 aa30.21■■■□□ 2.43
TSSC4-206ENST00000440813 NOS1P29475 1434 aa30.21■■■□□ 2.43
TSSC4-206ENST00000440813 UGGT1Q9NYU2 1555 aa30.19■■■□□ 2.42
TSSC4-206ENST00000440813 SYNMO15061 1565 aa30.18■■■□□ 2.42
TSSC4-206ENST00000440813 STRCQ7RTU9 1775 aa30.17■■■□□ 2.42
TSSC4-206ENST00000440813 THEMISQ8N1K5 641 aaPredicted RBP30.16■■■□□ 2.42
TSSC4-206ENST00000440813 IDI1Q13907 227 aa30.15■■■□□ 2.42
TSSC4-206ENST00000440813 NCKAP5LQ9HCH0 1330 aa30.14■■■□□ 2.42
TSSC4-206ENST00000440813 SLC4A1APQ9BWU0 796 aaKnown RBP30.13■■■□□ 2.41
TSSC4-206ENST00000440813 STAG3Q9UJ98 1225 aa30.12■■■□□ 2.41
TSSC4-206ENST00000440813 RAB3GAP2Q9H2M9 1393 aa30.12■■■□□ 2.41
TSSC4-206ENST00000440813 PLA2R1Q13018 1463 aa30.12■■■□□ 2.41
TSSC4-206ENST00000440813 PIK3C2BO00750 1634 aa30.11■■■□□ 2.41
TSSC4-206ENST00000440813 SLC52A1Q9NWF4 448 aa30.11■■■□□ 2.41
TSSC4-206ENST00000440813 PKD2Q13563 968 aa30.1■■■□□ 2.41
TSSC4-206ENST00000440813 UBR1Q8IWV7 1749 aa30.09■■■□□ 2.41
TSSC4-206ENST00000440813 DMRT2Q9Y5R5 561 aa30.08■■■□□ 2.41
TSSC4-206ENST00000440813 ANKLE2Q86XL3 938 aa30.04■■■□□ 2.4
TSSC4-206ENST00000440813 ACIN1Q9UKV3 1341 aaKnown RBP30.03■■■□□ 2.4
TSSC4-206ENST00000440813 MPHOSPH9Q99550 1183 aa30.03■■■□□ 2.4
TSSC4-206ENST00000440813 SPHKAPQ2M3C7 1700 aa30.02■■■□□ 2.4
TSSC4-206ENST00000440813 PTPRTO14522 1441 aa30.02■■■□□ 2.4
TSSC4-206ENST00000440813 CHGAP10645 457 aaKnown RBP30.01■■■□□ 2.39
TSSC4-206ENST00000440813 FOXD1Q16676 465 aa30■■■□□ 2.39
TSSC4-206ENST00000440813 ADGRB3O60242 1522 aa30■■■□□ 2.39
TSSC4-206ENST00000440813 POLR1AO95602 1720 aaPredicted RBP29.98■■■□□ 2.39
TSSC4-206ENST00000440813 KDM5AP29375 1690 aaKnown RBP29.98■■■□□ 2.39
TSSC4-206ENST00000440813 TMEM2Q9UHN6 1383 aa29.95■■■□□ 2.39
TSSC4-206ENST00000440813 TXNDC2Q86VQ3 553 aa29.95■■■□□ 2.39
TSSC4-206ENST00000440813 SLIT1O75093 1534 aa29.95■■■□□ 2.38
TSSC4-206ENST00000440813 NEURL4Q96JN8 1562 aa29.94■■■□□ 2.38
TSSC4-206ENST00000440813 ARHGAP23Q9P227 1491 aa29.94■■■□□ 2.38
TSSC4-206ENST00000440813 HRCP23327 699 aa29.94■■■□□ 2.38
TSSC4-206ENST00000440813 TRPM2O94759 1503 aa29.93■■■□□ 2.38
TSSC4-206ENST00000440813 LTKP29376 864 aa29.93■■■□□ 2.38
TSSC4-206ENST00000440813 EID1Q9Y6B2 187 aa29.93■■■□□ 2.38
TSSC4-206ENST00000440813 MYO5BQ9ULV0 1848 aa29.93■■■□□ 2.38
TSSC4-206ENST00000440813 TMEM131LA2VDJ0 1609 aa29.93■■■□□ 2.38
TSSC4-206ENST00000440813 TRIM26Q12899 539 aaPredicted RBP29.92■■■□□ 2.38
TSSC4-206ENST00000440813 SCAF11Q99590 1463 aaKnown RBP29.91■■■□□ 2.38
TSSC4-206ENST00000440813 NPHP4O75161 1426 aaPredicted RBP29.9■■■□□ 2.38
TSSC4-206ENST00000440813 CLTCL1P53675 1640 aa29.89■■■□□ 2.38
TSSC4-206ENST00000440813 MED14O60244 1454 aa29.87■■■□□ 2.37
TSSC4-206ENST00000440813 RIMS2Q9UQ26 1411 aa29.84■■■□□ 2.37
TSSC4-206ENST00000440813 IQGAP1P46940 1657 aa29.83■■■□□ 2.37
TSSC4-206ENST00000440813 ZNF326Q5BKZ1 582 aaKnown RBP29.82■■■□□ 2.36
TSSC4-206ENST00000440813 ZFYVE9O95405 1425 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms