RNA–Protein interactions for RNA: ENST00000440132.2

RNF220-205, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-205ENST00000440132 ADGRL2O95490 1459 aa29.78■■■□□ 2.36
RNF220-205ENST00000440132 NCOA1Q15788 1441 aa29.78■■■□□ 2.36
RNF220-205ENST00000440132 RRBP1Q9P2E9 1410 aaKnown RBP29.76■■■□□ 2.35
RNF220-205ENST00000440132 RNF17Q9BXT8 1623 aaKnown RBP29.74■■■□□ 2.35
RNF220-205ENST00000440132 ERBINQ96RT1 1412 aa29.74■■■□□ 2.35
RNF220-205ENST00000440132 ZMYM3Q14202 1370 aa29.74■■■□□ 2.35
RNF220-205ENST00000440132 PTPRKQ15262 1439 aa29.73■■■□□ 2.35
RNF220-205ENST00000440132 FAM135AQ9P2D6 1515 aa29.71■■■□□ 2.35
RNF220-205ENST00000440132 SETD1BQ9UPS6 1966 aaKnown RBP29.7■■■□□ 2.34
RNF220-205ENST00000440132 KDM5DQ9BY66 1539 aa29.69■■■□□ 2.34
RNF220-205ENST00000440132 WASHC2CQ9Y4E1 1318 aa29.67■■■□□ 2.34
RNF220-205ENST00000440132 MROH1Q8NDA8 1641 aa29.67■■■□□ 2.34
RNF220-205ENST00000440132 ITGAEP38570 1179 aa29.65■■■□□ 2.34
RNF220-205ENST00000440132 LMTK3Q96Q04 1460 aa29.65■■■□□ 2.34
RNF220-205ENST00000440132 PREX1Q8TCU6 1659 aa29.65■■■□□ 2.34
RNF220-205ENST00000440132 ROCK1Q13464 1354 aa29.64■■■□□ 2.34
RNF220-205ENST00000440132 ZC3H13Q5T200 1668 aaKnown RBP29.62■■■□□ 2.33
RNF220-205ENST00000440132 NPATQ14207 1427 aa29.62■■■□□ 2.33
RNF220-205ENST00000440132 DEPDC5O75140 1603 aa29.61■■■□□ 2.33
RNF220-205ENST00000440132 PRDM15P57071 1507 aaPredicted RBP29.6■■■□□ 2.33
RNF220-205ENST00000440132 ANKRD50Q9ULJ7 1429 aa29.59■■■□□ 2.33
RNF220-205ENST00000440132 ABCC3O15438 1527 aa29.59■■■□□ 2.33
RNF220-205ENST00000440132 CEP152O94986 1710 aa29.57■■■□□ 2.32
RNF220-205ENST00000440132 UHRF1BP1Q6BDS2 1440 aa29.56■■■□□ 2.32
RNF220-205ENST00000440132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.54■■■□□ 2.325e-9■■□□□ 13.5
RNF220-205ENST00000440132 PZPP20742 1482 aa29.54■■■□□ 2.32
RNF220-205ENST00000440132 KANK1Q14678 1352 aa29.52■■■□□ 2.32
RNF220-205ENST00000440132 CAMSAP1Q5T5Y3 1602 aa29.51■■■□□ 2.31
RNF220-205ENST00000440132 VWDEQ8N2E2 1590 aa29.49■■■□□ 2.31
RNF220-205ENST00000440132 HSPA2P54652 639 aa29.49■■■□□ 2.31
RNF220-205ENST00000440132 FBXO31Q5XUX0 539 aaPredicted RBP29.48■■■□□ 2.31
RNF220-205ENST00000440132 MYO3AQ8NEV4 1616 aa29.46■■■□□ 2.31
RNF220-205ENST00000440132 LMTK2Q8IWU2 1503 aa29.45■■■□□ 2.3
RNF220-205ENST00000440132 CFAP65Q6ZU64 1925 aaKnown RBP29.43■■■□□ 2.3
RNF220-205ENST00000440132 ARHGAP31Q2M1Z3 1444 aa29.43■■■□□ 2.3
RNF220-205ENST00000440132 UNC13BO14795 1591 aa29.43■■■□□ 2.3
RNF220-205ENST00000440132 TNRQ92752 1358 aa29.42■■■□□ 2.3
RNF220-205ENST00000440132 ZNF142P52746 1687 aaPredicted RBP29.42■■■□□ 2.3
RNF220-205ENST00000440132 SPATA31D1Q6ZQQ2 1576 aa29.39■■■□□ 2.3
RNF220-205ENST00000440132 GCC2Q8IWJ2 1684 aa29.39■■■□□ 2.3
RNF220-205ENST00000440132 CEP170BQ9Y4F5 1589 aaPredicted RBP29.38■■■□□ 2.29
RNF220-205ENST00000440132 NAIPQ13075 1403 aa29.37■■■□□ 2.29
RNF220-205ENST00000440132 ERVK-7P63135 1459 aa29.37■■■□□ 2.29
RNF220-205ENST00000440132 A2ML1A8K2U0 1454 aa29.35■■■□□ 2.29
RNF220-205ENST00000440132 HFM1A2PYH4 1435 aa29.34■■■□□ 2.29
RNF220-205ENST00000440132 EFCAB6Q5THR3 1501 aa29.34■■■□□ 2.29
RNF220-205ENST00000440132 NLRP1Q9C000 1473 aa29.33■■■□□ 2.29
RNF220-205ENST00000440132 TET3O43151 1660 aa29.32■■■□□ 2.28
RNF220-205ENST00000440132 STRCQ7RTU9 1775 aa29.31■■■□□ 2.28
RNF220-205ENST00000440132 IQGAP3Q86VI3 1631 aa29.31■■■□□ 2.28
RNF220-205ENST00000440132 NUP155O75694 1391 aa29.29■■■□□ 2.28
RNF220-205ENST00000440132 RPRD2Q5VT52 1461 aaKnown RBP29.26■■■□□ 2.27
RNF220-205ENST00000440132 UGGT1Q9NYU2 1555 aa29.23■■■□□ 2.27
RNF220-205ENST00000440132 PLA2R1Q13018 1463 aa29.23■■■□□ 2.27
RNF220-205ENST00000440132 E9PCH4 1651 aa29.22■■■□□ 2.27
RNF220-205ENST00000440132 NOS1P29475 1434 aa29.22■■■□□ 2.27
RNF220-205ENST00000440132 THEMISQ8N1K5 641 aaPredicted RBP29.2■■■□□ 2.26
RNF220-205ENST00000440132 DMRT2Q9Y5R5 561 aa29.2■■■□□ 2.26
RNF220-205ENST00000440132 SYNMO15061 1565 aa29.2■■■□□ 2.26
RNF220-205ENST00000440132 UBR1Q8IWV7 1749 aa29.17■■■□□ 2.26
RNF220-205ENST00000440132 NCKAP5LQ9HCH0 1330 aa29.16■■■□□ 2.26
RNF220-205ENST00000440132 PKD2Q13563 968 aa29.15■■■□□ 2.26
RNF220-205ENST00000440132 PIK3C2BO00750 1634 aa29.14■■■□□ 2.26
RNF220-205ENST00000440132 PTPRTO14522 1441 aa29.13■■■□□ 2.25
RNF220-205ENST00000440132 IDI1Q13907 227 aa29.13■■■□□ 2.25
RNF220-205ENST00000440132 TRIM52Q96A61 297 aa29.13■■■□□ 2.25
RNF220-205ENST00000440132 SLC52A1Q9NWF4 448 aa29.11■■■□□ 2.25
RNF220-205ENST00000440132 POLR1AO95602 1720 aaPredicted RBP29.11■■■□□ 2.25
RNF220-205ENST00000440132 KDM5AP29375 1690 aaKnown RBP29.1■■■□□ 2.25
RNF220-205ENST00000440132 SETD5Q9C0A6 1442 aa29.08■■■□□ 2.25
RNF220-205ENST00000440132 ANKLE2Q86XL3 938 aa29.07■■■□□ 2.24
RNF220-205ENST00000440132 STAG3Q9UJ98 1225 aa29.06■■■□□ 2.24
RNF220-205ENST00000440132 SPHKAPQ2M3C7 1700 aa29.04■■■□□ 2.24
RNF220-205ENST00000440132 NEURL4Q96JN8 1562 aa29.03■■■□□ 2.24
RNF220-205ENST00000440132 ACIN1Q9UKV3 1341 aaKnown RBP29.02■■■□□ 2.24
RNF220-205ENST00000440132 ADGRB3O60242 1522 aa29.02■■■□□ 2.24
RNF220-205ENST00000440132 SLIT1O75093 1534 aa29.02■■■□□ 2.24
RNF220-205ENST00000440132 SLC4A1APQ9BWU0 796 aaKnown RBP29.01■■■□□ 2.23
RNF220-205ENST00000440132 ARHGAP23Q9P227 1491 aa29.01■■■□□ 2.23
RNF220-205ENST00000440132 MED14O60244 1454 aa28.98■■■□□ 2.23
RNF220-205ENST00000440132 MYO5BQ9ULV0 1848 aa28.98■■■□□ 2.23
RNF220-205ENST00000440132 TMEM2Q9UHN6 1383 aa28.98■■■□□ 2.23
RNF220-205ENST00000440132 TMEM131LA2VDJ0 1609 aa28.97■■■□□ 2.23
RNF220-205ENST00000440132 RAB3GAP2Q9H2M9 1393 aa28.97■■■□□ 2.23
RNF220-205ENST00000440132 NPHP4O75161 1426 aaPredicted RBP28.94■■■□□ 2.22
RNF220-205ENST00000440132 SCAF11Q99590 1463 aaKnown RBP28.94■■■□□ 2.22
RNF220-205ENST00000440132 LTKP29376 864 aa28.94■■■□□ 2.22
RNF220-205ENST00000440132 TXNDC2Q86VQ3 553 aa28.94■■■□□ 2.22
RNF220-205ENST00000440132 MPHOSPH9Q99550 1183 aa28.93■■■□□ 2.22
RNF220-205ENST00000440132 EID1Q9Y6B2 187 aa28.93■■■□□ 2.22
RNF220-205ENST00000440132 IQGAP1P46940 1657 aa28.93■■■□□ 2.22
RNF220-205ENST00000440132 TRPM2O94759 1503 aa28.92■■■□□ 2.22
RNF220-205ENST00000440132 CHGAP10645 457 aaKnown RBP28.91■■■□□ 2.22
RNF220-205ENST00000440132 CLTCL1P53675 1640 aa28.87■■■□□ 2.21
RNF220-205ENST00000440132 HRCP23327 699 aa28.87■■■□□ 2.21
RNF220-205ENST00000440132 LTBP4Q8N2S1 1624 aa28.85■■■□□ 2.21
RNF220-205ENST00000440132 FOXD1Q16676 465 aa28.85■■■□□ 2.21
RNF220-205ENST00000440132 ZFYVE9O95405 1425 aa28.85■■■□□ 2.21
RNF220-205ENST00000440132 ZNF335Q9H4Z2 1342 aaPredicted RBP28.84■■■□□ 2.21
RNF220-205ENST00000440132 KIF1BO60333 1816 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms