RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 GGT6Q6P531 493 aa11.09□□□□□ -0.63
UBR3-205ENST00000439681 AGLP35573 1532 aa11.09□□□□□ -0.63
UBR3-205ENST00000439681 MPHOSPH9Q99550 1183 aa11.08□□□□□ -0.64
UBR3-205ENST00000439681 DHX57Q6P158 1386 aaKnown RBP11.07□□□□□ -0.64
UBR3-205ENST00000439681 PZPP20742 1482 aa11.07□□□□□ -0.64
UBR3-205ENST00000439681 ARID4BQ4LE39 1312 aaPredicted RBP11.06□□□□□ -0.64
UBR3-205ENST00000439681 EIF2AK4Q9P2K8 1649 aaKnown RBP11.06□□□□□ -0.64
UBR3-205ENST00000439681 SIGLEC1Q9BZZ2 1709 aa11.06□□□□□ -0.64
UBR3-205ENST00000439681 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
UBR3-205ENST00000439681 MLECQ14165 292 aa11.05□□□□□ -0.64
UBR3-205ENST00000439681 MROH1Q8NDA8 1641 aa11.05□□□□□ -0.64
UBR3-205ENST00000439681 UNC13BO14795 1591 aa11.05□□□□□ -0.64
UBR3-205ENST00000439681 KDM5DQ9BY66 1539 aa11.05□□□□□ -0.64
UBR3-205ENST00000439681 BCORL1Q5H9F3 1711 aa11.04□□□□□ -0.64
UBR3-205ENST00000439681 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
UBR3-205ENST00000439681 KANK1Q14678 1352 aa11.04□□□□□ -0.64
UBR3-205ENST00000439681 VWDEQ8N2E2 1590 aa11.04□□□□□ -0.64
UBR3-205ENST00000439681 DEPDC5O75140 1603 aa11.03□□□□□ -0.64
UBR3-205ENST00000439681 RNF17Q9BXT8 1623 aaKnown RBP11.03□□□□□ -0.64
UBR3-205ENST00000439681 WASHC2CQ9Y4E1 1318 aa11.03□□□□□ -0.64
UBR3-205ENST00000439681 PKD2Q13563 968 aa11.03□□□□□ -0.64
UBR3-205ENST00000439681 PRDM15P57071 1507 aaPredicted RBP11.03□□□□□ -0.64
UBR3-205ENST00000439681 FOXD1Q16676 465 aa11.03□□□□□ -0.64
UBR3-205ENST00000439681 FAM135AQ9P2D6 1515 aa11.02□□□□□ -0.64
UBR3-205ENST00000439681 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.65
UBR3-205ENST00000439681 LMTK2Q8IWU2 1503 aa11.01□□□□□ -0.65
UBR3-205ENST00000439681 ABCC3O15438 1527 aa11□□□□□ -0.65
UBR3-205ENST00000439681 IQGAP3Q86VI3 1631 aa11□□□□□ -0.65
UBR3-205ENST00000439681 ANKRD30BQ9BXX2 1392 aa10.98□□□□□ -0.65
UBR3-205ENST00000439681 ARHGAP31Q2M1Z3 1444 aa10.97□□□□□ -0.65
UBR3-205ENST00000439681 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
UBR3-205ENST00000439681 PLA2R1Q13018 1463 aa10.97□□□□□ -0.65
UBR3-205ENST00000439681 ZMYM3Q14202 1370 aa10.96□□□□□ -0.65
UBR3-205ENST00000439681 NPATQ14207 1427 aa10.96□□□□□ -0.65
UBR3-205ENST00000439681 ESF1Q9H501 851 aaKnown RBP10.96□□□□□ -0.65
UBR3-205ENST00000439681 SIN3AQ96ST3 1273 aa10.96□□□□□ -0.66
UBR3-205ENST00000439681 FBXO31Q5XUX0 539 aaPredicted RBP10.95□□□□□ -0.66
UBR3-205ENST00000439681 EFCAB6Q5THR3 1501 aa10.95□□□□□ -0.66
UBR3-205ENST00000439681 PTPRTO14522 1441 aa10.95□□□□□ -0.66
UBR3-205ENST00000439681 CNTLNQ9NXG0 1405 aa10.95□□□□□ -0.66
UBR3-205ENST00000439681 TET3O43151 1660 aa10.94□□□□□ -0.66
UBR3-205ENST00000439681 CEBPAP49715 358 aaPredicted RBP10.93□□□□□ -0.66
UBR3-205ENST00000439681 RPRD2Q5VT52 1461 aaKnown RBP10.93□□□□□ -0.66
UBR3-205ENST00000439681 NOS1P29475 1434 aa10.92□□□□□ -0.66
UBR3-205ENST00000439681 CEP152O94986 1710 aa10.92□□□□□ -0.66
UBR3-205ENST00000439681 NEUROD1Q13562 356 aa10.92□□□□□ -0.66
UBR3-205ENST00000439681 E9PCH4 1651 aa10.91□□□□□ -0.66
UBR3-205ENST00000439681 ZC3H13Q5T200 1668 aaKnown RBP10.91□□□□□ -0.66
UBR3-205ENST00000439681 CAMSAP1Q5T5Y3 1602 aa10.91□□□□□ -0.66
UBR3-205ENST00000439681 KDM4FA0A1W2PPD8 638 aa10.91□□□□□ -0.66
UBR3-205ENST00000439681 ADAMTSL3P82987 1691 aa10.91□□□□□ -0.66
UBR3-205ENST00000439681 CLTCQ00610 1675 aaKnown RBP10.91□□□□□ -0.66
UBR3-205ENST00000439681 ERVK-7P63135 1459 aa10.89□□□□□ -0.67
UBR3-205ENST00000439681 IDI1Q13907 227 aa10.89□□□□□ -0.67
UBR3-205ENST00000439681 MADDQ8WXG6 1647 aa10.88□□□□□ -0.67
UBR3-205ENST00000439681 CCDC144AA2RUR9 1427 aa10.88□□□□□ -0.67
UBR3-205ENST00000439681 TRPM2O94759 1503 aa10.88□□□□□ -0.67
UBR3-205ENST00000439681 SLC52A1Q9NWF4 448 aa10.87□□□□□ -0.67
UBR3-205ENST00000439681 PLPPR3Q6T4P5 718 aa10.87□□□□□ -0.67
UBR3-205ENST00000439681 SPATA31D1Q6ZQQ2 1576 aa10.86□□□□□ -0.67
UBR3-205ENST00000439681 MROH2AA6NES4 1674 aa10.86□□□□□ -0.67
UBR3-205ENST00000439681 TNRQ92752 1358 aa10.86□□□□□ -0.67
UBR3-205ENST00000439681 SYNMO15061 1565 aa10.86□□□□□ -0.67
UBR3-205ENST00000439681 UGGT1Q9NYU2 1555 aa10.86□□□□□ -0.67
UBR3-205ENST00000439681 PTPRMP28827 1452 aa10.85□□□□□ -0.67
UBR3-205ENST00000439681 FER1L4A9Z1Z3 1794 aa10.85□□□□□ -0.67
UBR3-205ENST00000439681 TIMELESSQ9UNS1 1208 aa10.84□□□□□ -0.67
UBR3-205ENST00000439681 SPATA31E1Q6ZUB1 1445 aa10.84□□□□□ -0.67
UBR3-205ENST00000439681 L3MBTL2Q969R5 705 aa10.84□□□□□ -0.67
UBR3-205ENST00000439681 RIMS1Q86UR5 1692 aaKnown RBP10.84□□□□□ -0.67
UBR3-205ENST00000439681 PREX1Q8TCU6 1659 aa10.83□□□□□ -0.68
UBR3-205ENST00000439681 CLTCL1P53675 1640 aa10.83□□□□□ -0.68
UBR3-205ENST00000439681 C3P01024 1663 aa10.83□□□□□ -0.68
UBR3-205ENST00000439681 SPHKAPQ2M3C7 1700 aa10.83□□□□□ -0.68
UBR3-205ENST00000439681 RGL3Q3MIN7 710 aa10.83□□□□□ -0.68
UBR3-205ENST00000439681 ZEB1P37275 1124 aaPredicted RBP10.82□□□□□ -0.68
UBR3-205ENST00000439681 CHGAP10645 457 aaKnown RBP10.82□□□□□ -0.68
UBR3-205ENST00000439681 PIK3C2BO00750 1634 aa10.81□□□□□ -0.68
UBR3-205ENST00000439681 TONSLQ96HA7 1378 aa10.81□□□□□ -0.68
UBR3-205ENST00000439681 PPP1R15AO75807 674 aaPredicted RBP10.8□□□□□ -0.68
UBR3-205ENST00000439681 NLRP1Q9C000 1473 aa10.79□□□□□ -0.68
UBR3-205ENST00000439681 DCAF11Q8TEB1 546 aa10.79□□□□□ -0.68
UBR3-205ENST00000439681 CFAP65Q6ZU64 1925 aaKnown RBP10.79□□□□□ -0.68
UBR3-205ENST00000439681 ADGRB3O60242 1522 aa10.78□□□□□ -0.68
UBR3-205ENST00000439681 NEURL4Q96JN8 1562 aa10.78□□□□□ -0.68
UBR3-205ENST00000439681 ZNF326Q5BKZ1 582 aaKnown RBP10.78□□□□□ -0.68
UBR3-205ENST00000439681 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
UBR3-205ENST00000439681 RPGRIP1LQ68CZ1 1315 aa10.78□□□□□ -0.68
UBR3-205ENST00000439681 A2ML1A8K2U0 1454 aa10.78□□□□□ -0.68
UBR3-205ENST00000439681 KDM2AQ9Y2K7 1162 aa10.77□□□□□ -0.68
UBR3-205ENST00000439681 TMEM131LA2VDJ0 1609 aa10.76□□□□□ -0.69
UBR3-205ENST00000439681 NBPF8Q3BBV2 869 aa10.76□□□□□ -0.69
UBR3-205ENST00000439681 THEMISQ8N1K5 641 aaPredicted RBP10.75□□□□□ -0.69
UBR3-205ENST00000439681 STAC3Q96MF2 364 aa10.75□□□□□ -0.69
UBR3-205ENST00000439681 ADGRF5Q8IZF2 1346 aa10.75□□□□□ -0.69
UBR3-205ENST00000439681 NUTM2DQ5VT03 806 aaPredicted RBP10.75□□□□□ -0.69
UBR3-205ENST00000439681 TMEM2Q9UHN6 1383 aa10.74□□□□□ -0.69
UBR3-205ENST00000439681 ZFYVE9O95405 1425 aa10.73□□□□□ -0.69
UBR3-205ENST00000439681 UHRF1BP1Q6BDS2 1440 aa10.73□□□□□ -0.69
UBR3-205ENST00000439681 RIMS2Q9UQ26 1411 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms