RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 CLTCQ00610 1675 aaKnown RBP29.69■■■□□ 2.34
SEMA3B-206ENST00000439487 C3P01024 1663 aa29.65■■■□□ 2.34
SEMA3B-206ENST00000439487 RNF17Q9BXT8 1623 aaKnown RBP29.64■■■□□ 2.34
SEMA3B-206ENST00000439487 ERBINQ96RT1 1412 aa29.64■■■□□ 2.34
SEMA3B-206ENST00000439487 CEBPAP49715 358 aaPredicted RBP29.64■■■□□ 2.34
SEMA3B-206ENST00000439487 MROH2AA6NES4 1674 aa29.63■■■□□ 2.33
SEMA3B-206ENST00000439487 CNTLNQ9NXG0 1405 aa29.62■■■□□ 2.33
SEMA3B-206ENST00000439487 PPP6R1Q9UPN7 881 aa29.61■■■□□ 2.33
SEMA3B-206ENST00000439487 ROCK1Q13464 1354 aa29.61■■■□□ 2.33
SEMA3B-206ENST00000439487 MROH1Q8NDA8 1641 aa29.59■■■□□ 2.33
SEMA3B-206ENST00000439487 ZMYM3Q14202 1370 aa29.56■■■□□ 2.32
SEMA3B-206ENST00000439487 SETD1BQ9UPS6 1966 aaKnown RBP29.55■■■□□ 2.32
SEMA3B-206ENST00000439487 ANKRD50Q9ULJ7 1429 aa29.55■■■□□ 2.32
SEMA3B-206ENST00000439487 KDM5DQ9BY66 1539 aa29.55■■■□□ 2.32
SEMA3B-206ENST00000439487 CEP152O94986 1710 aa29.54■■■□□ 2.32
SEMA3B-206ENST00000439487 WASHC2CQ9Y4E1 1318 aa29.54■■■□□ 2.32
SEMA3B-206ENST00000439487 DEPDC5O75140 1603 aa29.54■■■□□ 2.32
SEMA3B-206ENST00000439487 FAM135AQ9P2D6 1515 aa29.52■■■□□ 2.32
SEMA3B-206ENST00000439487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.51■■■□□ 2.314e-7■■■□□ 19
SEMA3B-206ENST00000439487 CFAP65Q6ZU64 1925 aaKnown RBP29.5■■■□□ 2.31
SEMA3B-206ENST00000439487 PRDM15P57071 1507 aaPredicted RBP29.5■■■□□ 2.31
SEMA3B-206ENST00000439487 ZC3H13Q5T200 1668 aaKnown RBP29.5■■■□□ 2.31
SEMA3B-206ENST00000439487 ABCC3O15438 1527 aa29.49■■■□□ 2.31
SEMA3B-206ENST00000439487 GCC2Q8IWJ2 1684 aa29.44■■■□□ 2.3
SEMA3B-206ENST00000439487 PREX1Q8TCU6 1659 aa29.44■■■□□ 2.3
SEMA3B-206ENST00000439487 CAMSAP1Q5T5Y3 1602 aa29.43■■■□□ 2.3
SEMA3B-206ENST00000439487 KANK1Q14678 1352 aa29.42■■■□□ 2.3
SEMA3B-206ENST00000439487 VWDEQ8N2E2 1590 aa29.4■■■□□ 2.3
SEMA3B-206ENST00000439487 UNC13BO14795 1591 aa29.39■■■□□ 2.3
SEMA3B-206ENST00000439487 NAIPQ13075 1403 aa29.39■■■□□ 2.3
SEMA3B-206ENST00000439487 NPATQ14207 1427 aa29.38■■■□□ 2.29
SEMA3B-206ENST00000439487 PZPP20742 1482 aa29.38■■■□□ 2.29
SEMA3B-206ENST00000439487 LMTK3Q96Q04 1460 aa29.37■■■□□ 2.29
SEMA3B-206ENST00000439487 FBXO31Q5XUX0 539 aaPredicted RBP29.37■■■□□ 2.29
SEMA3B-206ENST00000439487 HFM1A2PYH4 1435 aa29.35■■■□□ 2.29
SEMA3B-206ENST00000439487 LMTK2Q8IWU2 1503 aa29.34■■■□□ 2.29
SEMA3B-206ENST00000439487 UHRF1BP1Q6BDS2 1440 aa29.32■■■□□ 2.28
SEMA3B-206ENST00000439487 MYO3AQ8NEV4 1616 aa29.3■■■□□ 2.28
SEMA3B-206ENST00000439487 ARHGAP31Q2M1Z3 1444 aa29.28■■■□□ 2.28
SEMA3B-206ENST00000439487 IQGAP3Q86VI3 1631 aa29.28■■■□□ 2.28
SEMA3B-206ENST00000439487 HSPA2P54652 639 aa29.28■■■□□ 2.28
SEMA3B-206ENST00000439487 TET3O43151 1660 aa29.28■■■□□ 2.28
SEMA3B-206ENST00000439487 NUP155O75694 1391 aa29.27■■■□□ 2.28
SEMA3B-206ENST00000439487 TNRQ92752 1358 aa29.27■■■□□ 2.28
SEMA3B-206ENST00000439487 SPATA31D1Q6ZQQ2 1576 aa29.26■■■□□ 2.27
SEMA3B-206ENST00000439487 EFCAB6Q5THR3 1501 aa29.25■■■□□ 2.27
SEMA3B-206ENST00000439487 ERVK-7P63135 1459 aa29.25■■■□□ 2.27
SEMA3B-206ENST00000439487 ZNF142P52746 1687 aaPredicted RBP29.23■■■□□ 2.27
SEMA3B-206ENST00000439487 FBXO41Q8TF61 875 aa29.21■■■□□ 2.27
SEMA3B-206ENST00000439487 CEP170BQ9Y4F5 1589 aaPredicted RBP29.2■■■□□ 2.26
SEMA3B-206ENST00000439487 E9PCH4 1651 aa29.2■■■□□ 2.26
SEMA3B-206ENST00000439487 TRIM52Q96A61 297 aa29.18■■■□□ 2.26
SEMA3B-206ENST00000439487 A2ML1A8K2U0 1454 aa29.17■■■□□ 2.26
SEMA3B-206ENST00000439487 SETD5Q9C0A6 1442 aa29.15■■■□□ 2.26
SEMA3B-206ENST00000439487 NLRP1Q9C000 1473 aa29.14■■■□□ 2.26
SEMA3B-206ENST00000439487 RPRD2Q5VT52 1461 aaKnown RBP29.13■■■□□ 2.25
SEMA3B-206ENST00000439487 SYNMO15061 1565 aa29.12■■■□□ 2.25
SEMA3B-206ENST00000439487 STRCQ7RTU9 1775 aa29.11■■■□□ 2.25
SEMA3B-206ENST00000439487 NOS1P29475 1434 aa29.11■■■□□ 2.25
SEMA3B-206ENST00000439487 UGGT1Q9NYU2 1555 aa29.06■■■□□ 2.24
SEMA3B-206ENST00000439487 UBR1Q8IWV7 1749 aa29.06■■■□□ 2.24
SEMA3B-206ENST00000439487 PIK3C2BO00750 1634 aa29.05■■■□□ 2.24
SEMA3B-206ENST00000439487 RAB3GAP2Q9H2M9 1393 aa29.05■■■□□ 2.24
SEMA3B-206ENST00000439487 SPHKAPQ2M3C7 1700 aa29.03■■■□□ 2.24
SEMA3B-206ENST00000439487 IDI1Q13907 227 aa29.02■■■□□ 2.24
SEMA3B-206ENST00000439487 SLC4A1APQ9BWU0 796 aaKnown RBP29.02■■■□□ 2.24
SEMA3B-206ENST00000439487 PKD2Q13563 968 aa29■■■□□ 2.23
SEMA3B-206ENST00000439487 THEMISQ8N1K5 641 aaPredicted RBP29■■■□□ 2.23
SEMA3B-206ENST00000439487 MYO5BQ9ULV0 1848 aa28.99■■■□□ 2.23
SEMA3B-206ENST00000439487 PLA2R1Q13018 1463 aa28.98■■■□□ 2.23
SEMA3B-206ENST00000439487 SLC52A1Q9NWF4 448 aa28.98■■■□□ 2.23
SEMA3B-206ENST00000439487 NCKAP5LQ9HCH0 1330 aa28.97■■■□□ 2.23
SEMA3B-206ENST00000439487 STAG3Q9UJ98 1225 aa28.96■■■□□ 2.23
SEMA3B-206ENST00000439487 ACIN1Q9UKV3 1341 aaKnown RBP28.95■■■□□ 2.23
SEMA3B-206ENST00000439487 POLR1AO95602 1720 aaPredicted RBP28.95■■■□□ 2.23
SEMA3B-206ENST00000439487 MPHOSPH9Q99550 1183 aa28.95■■■□□ 2.22
SEMA3B-206ENST00000439487 KDM5AP29375 1690 aaKnown RBP28.95■■■□□ 2.22
SEMA3B-206ENST00000439487 PTPRTO14522 1441 aa28.94■■■□□ 2.22
SEMA3B-206ENST00000439487 ADGRB3O60242 1522 aa28.92■■■□□ 2.22
SEMA3B-206ENST00000439487 TRIM26Q12899 539 aaPredicted RBP28.91■■■□□ 2.22
SEMA3B-206ENST00000439487 FOXD1Q16676 465 aa28.91■■■□□ 2.22
SEMA3B-206ENST00000439487 HRCP23327 699 aa28.89■■■□□ 2.22
SEMA3B-206ENST00000439487 DMRT2Q9Y5R5 561 aa28.89■■■□□ 2.22
SEMA3B-206ENST00000439487 TMEM131LA2VDJ0 1609 aa28.88■■■□□ 2.21
SEMA3B-206ENST00000439487 ANKLE2Q86XL3 938 aa28.88■■■□□ 2.21
SEMA3B-206ENST00000439487 CHGAP10645 457 aaKnown RBP28.87■■■□□ 2.21
SEMA3B-206ENST00000439487 TRPM2O94759 1503 aa28.87■■■□□ 2.21
SEMA3B-206ENST00000439487 CLTCL1P53675 1640 aa28.87■■■□□ 2.21
SEMA3B-206ENST00000439487 SLIT1O75093 1534 aa28.85■■■□□ 2.21
SEMA3B-206ENST00000439487 NEURL4Q96JN8 1562 aa28.85■■■□□ 2.21
SEMA3B-206ENST00000439487 ARHGAP23Q9P227 1491 aa28.85■■■□□ 2.21
SEMA3B-206ENST00000439487 KIF1BO60333 1816 aa28.84■■■□□ 2.21
SEMA3B-206ENST00000439487 TMEM2Q9UHN6 1383 aa28.83■■■□□ 2.21
SEMA3B-206ENST00000439487 LTKP29376 864 aa28.81■■■□□ 2.2
SEMA3B-206ENST00000439487 TXNDC2Q86VQ3 553 aa28.8■■■□□ 2.2
SEMA3B-206ENST00000439487 SCAF11Q99590 1463 aaKnown RBP28.78■■■□□ 2.2
SEMA3B-206ENST00000439487 EID1Q9Y6B2 187 aa28.78■■■□□ 2.2
SEMA3B-206ENST00000439487 IQGAP1P46940 1657 aa28.77■■■□□ 2.2
SEMA3B-206ENST00000439487 MED14O60244 1454 aa28.77■■■□□ 2.2
SEMA3B-206ENST00000439487 NPHP4O75161 1426 aaPredicted RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms