RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 TIAM1Q13009 1591 aa22.81■■□□□ 1.24
LINC01088-201ENST00000437737 SHANK2Q9UPX8 1470 aa22.81■■□□□ 1.24
LINC01088-201ENST00000437737 TNRQ92752 1358 aa22.81■■□□□ 1.24
LINC01088-201ENST00000437737 ZNF644Q9H582 1327 aaPredicted RBP22.81■■□□□ 1.24
LINC01088-201ENST00000437737 DHX29Q7Z478 1369 aaKnown RBP22.78■■□□□ 1.24
LINC01088-201ENST00000437737 RTEL1-TNFRSF6BF6WH68 1400 aa22.78■■□□□ 1.24
LINC01088-201ENST00000437737 FBXO31Q5XUX0 539 aaPredicted RBP22.78■■□□□ 1.24
LINC01088-201ENST00000437737 MBD5Q9P267 1494 aa22.78■■□□□ 1.24
LINC01088-201ENST00000437737 KDM5DQ9BY66 1539 aa22.77■■□□□ 1.24
LINC01088-201ENST00000437737 PZPP20742 1482 aa22.77■■□□□ 1.24
LINC01088-201ENST00000437737 KIF3BO15066 747 aa22.76■■□□□ 1.23
LINC01088-201ENST00000437737 ANKLE2Q86XL3 938 aa22.75■■□□□ 1.23
LINC01088-201ENST00000437737 PHF23Q9BUL5 403 aaPredicted RBP22.75■■□□□ 1.23
LINC01088-201ENST00000437737 EHBP1L1Q8N3D4 1523 aa22.75■■□□□ 1.23
LINC01088-201ENST00000437737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.75■■□□□ 1.23
LINC01088-201ENST00000437737 FAM135AQ9P2D6 1515 aa22.74■■□□□ 1.23
LINC01088-201ENST00000437737 VWDEQ8N2E2 1590 aa22.74■■□□□ 1.23
LINC01088-201ENST00000437737 WASHC2CQ9Y4E1 1318 aa22.72■■□□□ 1.23
LINC01088-201ENST00000437737 THEMISQ8N1K5 641 aaPredicted RBP22.71■■□□□ 1.23
LINC01088-201ENST00000437737 UGGT1Q9NYU2 1555 aa22.71■■□□□ 1.23
LINC01088-201ENST00000437737 NPHP4O75161 1426 aaPredicted RBP22.7■■□□□ 1.22
LINC01088-201ENST00000437737 CCDC141Q6ZP82 1450 aa22.7■■□□□ 1.22
LINC01088-201ENST00000437737 NLRP1Q9C000 1473 aa22.7■■□□□ 1.22
LINC01088-201ENST00000437737 DEPDC5O75140 1603 aa22.7■■□□□ 1.22
LINC01088-201ENST00000437737 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
LINC01088-201ENST00000437737 MIA2Q96PC5 1412 aa22.68■■□□□ 1.22
LINC01088-201ENST00000437737 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
LINC01088-201ENST00000437737 ALKQ9UM73 1620 aa22.67■■□□□ 1.22
LINC01088-201ENST00000437737 MED14O60244 1454 aa22.66■■□□□ 1.22
LINC01088-201ENST00000437737 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
LINC01088-201ENST00000437737 CAMSAP2Q08AD1 1489 aa22.66■■□□□ 1.22
LINC01088-201ENST00000437737 STRCP1A6NGW2 1772 aa22.63■■□□□ 1.21
LINC01088-201ENST00000437737 RNF17Q9BXT8 1623 aaKnown RBP22.62■■□□□ 1.21
LINC01088-201ENST00000437737 SYNMO15061 1565 aa22.61■■□□□ 1.21
LINC01088-201ENST00000437737 RSPH4AQ5TD94 716 aa22.61■■□□□ 1.21
LINC01088-201ENST00000437737 LRRC7Q96NW7 1537 aa22.59■■□□□ 1.21
LINC01088-201ENST00000437737 NCOA2Q15596 1464 aa22.59■■□□□ 1.21
LINC01088-201ENST00000437737 ZC3H13Q5T200 1668 aaKnown RBP22.58■■□□□ 1.21
LINC01088-201ENST00000437737 ARHGEF5Q12774 1597 aa22.57■■□□□ 1.2
LINC01088-201ENST00000437737 TSPY4P0CV99 314 aa22.56■■□□□ 1.2
LINC01088-201ENST00000437737 TSPY10P0CW01 314 aa22.56■■□□□ 1.2
LINC01088-201ENST00000437737 ABCC3O15438 1527 aa22.54■■□□□ 1.2
LINC01088-201ENST00000437737 CFAP65Q6ZU64 1925 aaKnown RBP22.53■■□□□ 1.2
LINC01088-201ENST00000437737 ERVK-7P63135 1459 aa22.52■■□□□ 1.2
LINC01088-201ENST00000437737 UBR1Q8IWV7 1749 aa22.51■■□□□ 1.19
LINC01088-201ENST00000437737 CEP152O94986 1710 aa22.5■■□□□ 1.19
LINC01088-201ENST00000437737 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
LINC01088-201ENST00000437737 SCAF11Q99590 1463 aaKnown RBP22.47■■□□□ 1.19
LINC01088-201ENST00000437737 MAST1Q9Y2H9 1570 aa22.47■■□□□ 1.19
LINC01088-201ENST00000437737 MROH1Q8NDA8 1641 aa22.45■■□□□ 1.18
LINC01088-201ENST00000437737 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.18
LINC01088-201ENST00000437737 RGS17Q9UGC6 210 aaPredicted RBP22.42■■□□□ 1.18
LINC01088-201ENST00000437737 TXNDC2Q86VQ3 553 aa22.41■■□□□ 1.18
LINC01088-201ENST00000437737 SLIT1O75093 1534 aa22.4■■□□□ 1.18
LINC01088-201ENST00000437737 LTKP29376 864 aa22.39■■□□□ 1.17
LINC01088-201ENST00000437737 ARHGAP23Q9P227 1491 aa22.39■■□□□ 1.17
LINC01088-201ENST00000437737 EID1Q9Y6B2 187 aa22.38■■□□□ 1.17
LINC01088-201ENST00000437737 DUOX2Q9NRD8 1548 aa22.36■■□□□ 1.17
LINC01088-201ENST00000437737 LRRC9Q6ZRR7 1453 aa22.35■■□□□ 1.17
LINC01088-201ENST00000437737 PIK3C2BO00750 1634 aa22.35■■□□□ 1.17
LINC01088-201ENST00000437737 FAM135BQ49AJ0 1406 aa22.33■■□□□ 1.17
LINC01088-201ENST00000437737 PRDM15P57071 1507 aaPredicted RBP22.32■■□□□ 1.16
LINC01088-201ENST00000437737 STAG3Q9UJ98 1225 aa22.32■■□□□ 1.16
LINC01088-201ENST00000437737 ARHGAP31Q2M1Z3 1444 aa22.31■■□□□ 1.16
LINC01088-201ENST00000437737 ROBO1Q9Y6N7 1651 aa22.31■■□□□ 1.16
LINC01088-201ENST00000437737 MYOM3Q5VTT5 1437 aa22.3■■□□□ 1.16
LINC01088-201ENST00000437737 TMEM94Q12767 1356 aa22.29■■□□□ 1.16
LINC01088-201ENST00000437737 TMEM2Q9UHN6 1383 aa22.29■■□□□ 1.16
LINC01088-201ENST00000437737 POTEAQ6S8J7 498 aa22.29■■□□□ 1.16
LINC01088-201ENST00000437737 KIF15Q9NS87 1388 aa22.27■■□□□ 1.16
LINC01088-201ENST00000437737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.16
LINC01088-201ENST00000437737 CROCC2H7BZ55 1655 aa22.26■■□□□ 1.15
LINC01088-201ENST00000437737 EFCAB6Q5THR3 1501 aa22.26■■□□□ 1.15
LINC01088-201ENST00000437737 ERBINQ96RT1 1412 aa22.26■■□□□ 1.15
LINC01088-201ENST00000437737 KDM5AP29375 1690 aaKnown RBP22.26■■□□□ 1.15
LINC01088-201ENST00000437737 VPS8Q8N3P4 1428 aa22.25■■□□□ 1.15
LINC01088-201ENST00000437737 MAP3K1Q13233 1512 aa22.25■■□□□ 1.15
LINC01088-201ENST00000437737 KCNA6P17658 529 aa22.24■■□□□ 1.15
LINC01088-201ENST00000437737 PROSER2Q86WR7 435 aaPredicted RBP22.24■■□□□ 1.15
LINC01088-201ENST00000437737 KANK1Q14678 1352 aa22.24■■□□□ 1.15
LINC01088-201ENST00000437737 RRP7BPQ9NSQ0 103 aa22.23■■□□□ 1.15
LINC01088-201ENST00000437737 SETD1AO15047 1707 aaKnown RBP22.23■■□□□ 1.15
LINC01088-201ENST00000437737 KANK4Q5T7N3 995 aaPredicted RBP22.22■■□□□ 1.15
LINC01088-201ENST00000437737 RBM33Q96EV2 1170 aaKnown RBP22.22■■□□□ 1.15
LINC01088-201ENST00000437737 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
LINC01088-201ENST00000437737 PHLPP1O60346 1717 aa22.2■■□□□ 1.14
LINC01088-201ENST00000437737 TET3O43151 1660 aa22.2■■□□□ 1.14
LINC01088-201ENST00000437737 NWD1Q149M9 1564 aa22.18■■□□□ 1.14
LINC01088-201ENST00000437737 NKTRP30414 1462 aaKnown RBP22.18■■□□□ 1.14
LINC01088-201ENST00000437737 IDI1Q13907 227 aa22.18■■□□□ 1.14
LINC01088-201ENST00000437737 ABCC5O15440 1437 aa22.17■■□□□ 1.14
LINC01088-201ENST00000437737 MSH6P52701 1360 aa22.17■■□□□ 1.14
LINC01088-201ENST00000437737 BCANQ96GW7 911 aa22.17■■□□□ 1.14
LINC01088-201ENST00000437737 PTPN23Q9H3S7 1636 aa22.17■■□□□ 1.14
LINC01088-201ENST00000437737 ADGRB3O60242 1522 aa22.16■■□□□ 1.14
LINC01088-201ENST00000437737 LMTK2Q8IWU2 1503 aa22.15■■□□□ 1.14
LINC01088-201ENST00000437737 DAPK1P53355 1430 aa22.13■■□□□ 1.13
LINC01088-201ENST00000437737 JCADQ9P266 1359 aa22.12■■□□□ 1.13
LINC01088-201ENST00000437737 SLAIN2Q9P270 581 aa22.11■■□□□ 1.13
LINC01088-201ENST00000437737 NOS1P29475 1434 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms