RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 DEPDC5O75140 1603 aa22.33■■□□□ 1.17
CPNE1-215ENST00000437100 MADDQ8WXG6 1647 aa22.33■■□□□ 1.17
CPNE1-215ENST00000437100 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
CPNE1-215ENST00000437100 PRDM15P57071 1507 aaPredicted RBP22.32■■□□□ 1.16
CPNE1-215ENST00000437100 GGT6Q6P531 493 aa22.3■■□□□ 1.16
CPNE1-215ENST00000437100 KDM5DQ9BY66 1539 aa22.3■■□□□ 1.16
CPNE1-215ENST00000437100 CNTLNQ9NXG0 1405 aa22.28■■□□□ 1.16
CPNE1-215ENST00000437100 VWDEQ8N2E2 1590 aa22.28■■□□□ 1.16
CPNE1-215ENST00000437100 FER1L4A9Z1Z3 1794 aa22.27■■□□□ 1.16
CPNE1-215ENST00000437100 UNC13BO14795 1591 aa22.26■■□□□ 1.15
CPNE1-215ENST00000437100 ABCC3O15438 1527 aa22.26■■□□□ 1.15
CPNE1-215ENST00000437100 PTPRMP28827 1452 aa22.25■■□□□ 1.15
CPNE1-215ENST00000437100 RIMS1Q86UR5 1692 aaKnown RBP22.23■■□□□ 1.15
CPNE1-215ENST00000437100 LMTK2Q8IWU2 1503 aa22.22■■□□□ 1.15
CPNE1-215ENST00000437100 TRIM26Q12899 539 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-215ENST00000437100 MROH2AA6NES4 1674 aa22.22■■□□□ 1.15
CPNE1-215ENST00000437100 ZC3H13Q5T200 1668 aaKnown RBP22.22■■□□□ 1.15
CPNE1-215ENST00000437100 SETD5Q9C0A6 1442 aa22.21■■□□□ 1.15
CPNE1-215ENST00000437100 WASHC2CQ9Y4E1 1318 aa22.2■■□□□ 1.14
CPNE1-215ENST00000437100 CLTCQ00610 1675 aaKnown RBP22.2■■□□□ 1.14
CPNE1-215ENST00000437100 ZMYM3Q14202 1370 aa22.19■■□□□ 1.14
CPNE1-215ENST00000437100 KANK1Q14678 1352 aa22.18■■□□□ 1.14
CPNE1-215ENST00000437100 ESF1Q9H501 851 aaKnown RBP22.17■■□□□ 1.14
CPNE1-215ENST00000437100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.16■■□□□ 1.142e-14■□□□□ 8.9
CPNE1-215ENST00000437100 IQGAP3Q86VI3 1631 aa22.16■■□□□ 1.14
CPNE1-215ENST00000437100 ARHGAP31Q2M1Z3 1444 aa22.15■■□□□ 1.14
CPNE1-215ENST00000437100 PZPP20742 1482 aa22.15■■□□□ 1.14
CPNE1-215ENST00000437100 RAB3GAP2Q9H2M9 1393 aa22.14■■□□□ 1.14
CPNE1-215ENST00000437100 CEP152O94986 1710 aa22.14■■□□□ 1.13
CPNE1-215ENST00000437100 C3P01024 1663 aa22.14■■□□□ 1.13
CPNE1-215ENST00000437100 NUP155O75694 1391 aa22.13■■□□□ 1.13
CPNE1-215ENST00000437100 CAMSAP1Q5T5Y3 1602 aa22.13■■□□□ 1.13
CPNE1-215ENST00000437100 EFCAB6Q5THR3 1501 aa22.12■■□□□ 1.13
CPNE1-215ENST00000437100 HRCP23327 699 aa22.11■■□□□ 1.13
CPNE1-215ENST00000437100 CEBPAP49715 358 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-215ENST00000437100 NPATQ14207 1427 aa22.11■■□□□ 1.13
CPNE1-215ENST00000437100 TET3O43151 1660 aa22.1■■□□□ 1.13
CPNE1-215ENST00000437100 ACIN1Q9UKV3 1341 aaKnown RBP22.09■■□□□ 1.13
CPNE1-215ENST00000437100 RPRD2Q5VT52 1461 aaKnown RBP22.07■■□□□ 1.12
CPNE1-215ENST00000437100 SPATA31D1Q6ZQQ2 1576 aa22.06■■□□□ 1.12
CPNE1-215ENST00000437100 ERVK-7P63135 1459 aa22.05■■□□□ 1.12
CPNE1-215ENST00000437100 FBXO31Q5XUX0 539 aaPredicted RBP22.03■■□□□ 1.12
CPNE1-215ENST00000437100 NOS1P29475 1434 aa22.03■■□□□ 1.12
CPNE1-215ENST00000437100 TRIM52Q96A61 297 aa22.02■■□□□ 1.12
CPNE1-215ENST00000437100 E9PCH4 1651 aa22.01■■□□□ 1.11
CPNE1-215ENST00000437100 PREX1Q8TCU6 1659 aa22■■□□□ 1.11
CPNE1-215ENST00000437100 TNRQ92752 1358 aa21.99■■□□□ 1.11
CPNE1-215ENST00000437100 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
CPNE1-215ENST00000437100 SLC4A1APQ9BWU0 796 aaKnown RBP21.97■■□□□ 1.11
CPNE1-215ENST00000437100 PTPRTO14522 1441 aa21.97■■□□□ 1.11
CPNE1-215ENST00000437100 SYNMO15061 1565 aa21.96■■□□□ 1.11
CPNE1-215ENST00000437100 MPHOSPH9Q99550 1183 aa21.96■■□□□ 1.11
CPNE1-215ENST00000437100 SETD1BQ9UPS6 1966 aaKnown RBP21.96■■□□□ 1.11
CPNE1-215ENST00000437100 LMTK3Q96Q04 1460 aa21.95■■□□□ 1.1
CPNE1-215ENST00000437100 MYO3AQ8NEV4 1616 aa21.95■■□□□ 1.1
CPNE1-215ENST00000437100 PKD2Q13563 968 aa21.94■■□□□ 1.1
CPNE1-215ENST00000437100 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-215ENST00000437100 NLRP1Q9C000 1473 aa21.94■■□□□ 1.1
CPNE1-215ENST00000437100 UHRF1BP1Q6BDS2 1440 aa21.93■■□□□ 1.1
CPNE1-215ENST00000437100 PLA2R1Q13018 1463 aa21.92■■□□□ 1.1
CPNE1-215ENST00000437100 PCGF6Q9BYE7 350 aa21.91■■□□□ 1.1
CPNE1-215ENST00000437100 ZNF142P52746 1687 aaPredicted RBP21.91■■□□□ 1.1
CPNE1-215ENST00000437100 A2ML1A8K2U0 1454 aa21.9■■□□□ 1.1
CPNE1-215ENST00000437100 CEP170BQ9Y4F5 1589 aaPredicted RBP21.89■■□□□ 1.09
CPNE1-215ENST00000437100 TRPM2O94759 1503 aa21.89■■□□□ 1.09
CPNE1-215ENST00000437100 PIK3C2BO00750 1634 aa21.88■■□□□ 1.09
CPNE1-215ENST00000437100 SPHKAPQ2M3C7 1700 aa21.87■■□□□ 1.09
CPNE1-215ENST00000437100 SLC52A1Q9NWF4 448 aa21.86■■□□□ 1.09
CPNE1-215ENST00000437100 CFAP65Q6ZU64 1925 aaKnown RBP21.86■■□□□ 1.09
CPNE1-215ENST00000437100 UGGT1Q9NYU2 1555 aa21.86■■□□□ 1.09
CPNE1-215ENST00000437100 FOXD1Q16676 465 aa21.85■■□□□ 1.09
CPNE1-215ENST00000437100 IDI1Q13907 227 aa21.84■■□□□ 1.09
CPNE1-215ENST00000437100 ANKRD30BQ9BXX2 1392 aa21.81■■□□□ 1.08
CPNE1-215ENST00000437100 ADGRB3O60242 1522 aa21.8■■□□□ 1.08
CPNE1-215ENST00000437100 CLTCL1P53675 1640 aa21.8■■□□□ 1.08
CPNE1-215ENST00000437100 KDM5AP29375 1690 aaKnown RBP21.8■■□□□ 1.08
CPNE1-215ENST00000437100 DHX57Q6P158 1386 aaKnown RBP21.8■■□□□ 1.08
CPNE1-215ENST00000437100 UBR1Q8IWV7 1749 aa21.78■■□□□ 1.08
CPNE1-215ENST00000437100 HSPA2P54652 639 aa21.76■■□□□ 1.07
CPNE1-215ENST00000437100 TMEM131LA2VDJ0 1609 aa21.76■■□□□ 1.07
CPNE1-215ENST00000437100 ARHGAP23Q9P227 1491 aa21.75■■□□□ 1.07
CPNE1-215ENST00000437100 CCDC144AA2RUR9 1427 aa21.74■■□□□ 1.07
CPNE1-215ENST00000437100 THEMISQ8N1K5 641 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-215ENST00000437100 SLIT1O75093 1534 aa21.74■■□□□ 1.07
CPNE1-215ENST00000437100 TMEM2Q9UHN6 1383 aa21.72■■□□□ 1.07
CPNE1-215ENST00000437100 NEURL4Q96JN8 1562 aa21.71■■□□□ 1.07
CPNE1-215ENST00000437100 SPATA31E1Q6ZUB1 1445 aa21.7■■□□□ 1.06
CPNE1-215ENST00000437100 ZFYVE9O95405 1425 aa21.69■■□□□ 1.06
CPNE1-215ENST00000437100 STAG3Q9UJ98 1225 aa21.68■■□□□ 1.06
CPNE1-215ENST00000437100 STRCQ7RTU9 1775 aa21.66■■□□□ 1.06
CPNE1-215ENST00000437100 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.06
CPNE1-215ENST00000437100 CHGAP10645 457 aaKnown RBP21.64■■□□□ 1.05
CPNE1-215ENST00000437100 KIF1BO60333 1816 aa21.64■■□□□ 1.05
CPNE1-215ENST00000437100 MED14O60244 1454 aa21.64■■□□□ 1.05
CPNE1-215ENST00000437100 SCAF11Q99590 1463 aaKnown RBP21.64■■□□□ 1.05
CPNE1-215ENST00000437100 RIMS2Q9UQ26 1411 aa21.63■■□□□ 1.05
CPNE1-215ENST00000437100 LTKP29376 864 aa21.63■■□□□ 1.05
CPNE1-215ENST00000437100 NEXMIFQ5QGS0 1516 aa21.62■■□□□ 1.05
CPNE1-215ENST00000437100 ANKLE2Q86XL3 938 aa21.62■■□□□ 1.05
CPNE1-215ENST00000437100 NCKAP5LQ9HCH0 1330 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms