RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 ANKLE2Q86XL3 938 aa18.67■□□□□ 0.58
LINC00271-202ENST00000436554 TNRQ92752 1358 aa18.67■□□□□ 0.58
LINC00271-202ENST00000436554 WASHC2CQ9Y4E1 1318 aa18.66■□□□□ 0.58
LINC00271-202ENST00000436554 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
LINC00271-202ENST00000436554 DNMT1P26358 1616 aaKnown RBP18.64■□□□□ 0.57
LINC00271-202ENST00000436554 THEMISQ8N1K5 641 aaPredicted RBP18.64■□□□□ 0.57
LINC00271-202ENST00000436554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.63■□□□□ 0.57
LINC00271-202ENST00000436554 SHANK2Q9UPX8 1470 aa18.63■□□□□ 0.57
LINC00271-202ENST00000436554 ADGBQ8N7X0 1667 aa18.62■□□□□ 0.57
LINC00271-202ENST00000436554 RSPH4AQ5TD94 716 aa18.61■□□□□ 0.57
LINC00271-202ENST00000436554 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
LINC00271-202ENST00000436554 MIA2Q96PC5 1412 aa18.59■□□□□ 0.57
LINC00271-202ENST00000436554 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
LINC00271-202ENST00000436554 CPS1P31327 1500 aa18.59■□□□□ 0.57
LINC00271-202ENST00000436554 PZPP20742 1482 aa18.58■□□□□ 0.56
LINC00271-202ENST00000436554 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
LINC00271-202ENST00000436554 NEURL4Q96JN8 1562 aa18.56■□□□□ 0.56
LINC00271-202ENST00000436554 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
LINC00271-202ENST00000436554 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
LINC00271-202ENST00000436554 NPHP4O75161 1426 aaPredicted RBP18.54■□□□□ 0.56
LINC00271-202ENST00000436554 MED1Q15648 1581 aaPredicted RBP18.54■□□□□ 0.56
LINC00271-202ENST00000436554 CCDC141Q6ZP82 1450 aa18.53■□□□□ 0.56
LINC00271-202ENST00000436554 EHBP1L1Q8N3D4 1523 aa18.53■□□□□ 0.56
LINC00271-202ENST00000436554 KDM5DQ9BY66 1539 aa18.53■□□□□ 0.56
LINC00271-202ENST00000436554 FAM135AQ9P2D6 1515 aa18.52■□□□□ 0.56
LINC00271-202ENST00000436554 NLRP1Q9C000 1473 aa18.52■□□□□ 0.55
LINC00271-202ENST00000436554 VWDEQ8N2E2 1590 aa18.51■□□□□ 0.55
LINC00271-202ENST00000436554 MED14O60244 1454 aa18.51■□□□□ 0.55
LINC00271-202ENST00000436554 UGGT1Q9NYU2 1555 aa18.51■□□□□ 0.55
LINC00271-202ENST00000436554 POLR1AO95602 1720 aaPredicted RBP18.49■□□□□ 0.55
LINC00271-202ENST00000436554 CAMSAP2Q08AD1 1489 aa18.49■□□□□ 0.55
LINC00271-202ENST00000436554 NCOA2Q15596 1464 aa18.49■□□□□ 0.55
LINC00271-202ENST00000436554 ALKQ9UM73 1620 aa18.46■□□□□ 0.55
LINC00271-202ENST00000436554 LRRC7Q96NW7 1537 aa18.44■□□□□ 0.54
LINC00271-202ENST00000436554 DEPDC5O75140 1603 aa18.44■□□□□ 0.54
LINC00271-202ENST00000436554 LTKP29376 864 aa18.42■□□□□ 0.54
LINC00271-202ENST00000436554 TXNDC2Q86VQ3 553 aa18.42■□□□□ 0.54
LINC00271-202ENST00000436554 RGS17Q9UGC6 210 aaPredicted RBP18.4■□□□□ 0.54
LINC00271-202ENST00000436554 ABCC3O15438 1527 aa18.39■□□□□ 0.54
LINC00271-202ENST00000436554 ARHGEF5Q12774 1597 aa18.39■□□□□ 0.53
LINC00271-202ENST00000436554 IQGAP1P46940 1657 aa18.39■□□□□ 0.53
LINC00271-202ENST00000436554 ERVK-7P63135 1459 aa18.39■□□□□ 0.53
LINC00271-202ENST00000436554 STRCP1A6NGW2 1772 aa18.37■□□□□ 0.53
LINC00271-202ENST00000436554 KANK4Q5T7N3 995 aaPredicted RBP18.36■□□□□ 0.53
LINC00271-202ENST00000436554 EID1Q9Y6B2 187 aa18.35■□□□□ 0.53
LINC00271-202ENST00000436554 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
LINC00271-202ENST00000436554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.33■□□□□ 0.52
LINC00271-202ENST00000436554 RNF17Q9BXT8 1623 aaKnown RBP18.33■□□□□ 0.52
LINC00271-202ENST00000436554 RRP7BPQ9NSQ0 103 aa18.32■□□□□ 0.52
LINC00271-202ENST00000436554 LRRC9Q6ZRR7 1453 aa18.32■□□□□ 0.52
LINC00271-202ENST00000436554 CFAP65Q6ZU64 1925 aaKnown RBP18.31■□□□□ 0.52
LINC00271-202ENST00000436554 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
LINC00271-202ENST00000436554 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
LINC00271-202ENST00000436554 ARHGAP23Q9P227 1491 aa18.29■□□□□ 0.52
LINC00271-202ENST00000436554 MROH1Q8NDA8 1641 aa18.28■□□□□ 0.52
LINC00271-202ENST00000436554 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
LINC00271-202ENST00000436554 SYNMO15061 1565 aa18.28■□□□□ 0.52
LINC00271-202ENST00000436554 SLIT1O75093 1534 aa18.28■□□□□ 0.52
LINC00271-202ENST00000436554 ZC3H13Q5T200 1668 aaKnown RBP18.28■□□□□ 0.52
LINC00271-202ENST00000436554 UBR1Q8IWV7 1749 aa18.27■□□□□ 0.52
LINC00271-202ENST00000436554 FAM135BQ49AJ0 1406 aa18.27■□□□□ 0.52
LINC00271-202ENST00000436554 MYOM3Q5VTT5 1437 aa18.27■□□□□ 0.52
LINC00271-202ENST00000436554 IDI1Q13907 227 aa18.27■□□□□ 0.52
LINC00271-202ENST00000436554 POTEAQ6S8J7 498 aa18.27■□□□□ 0.52
LINC00271-202ENST00000436554 RBM33Q96EV2 1170 aaKnown RBP18.27■□□□□ 0.52
LINC00271-202ENST00000436554 TMEM2Q9UHN6 1383 aa18.27■□□□□ 0.51
LINC00271-202ENST00000436554 ARHGAP31Q2M1Z3 1444 aa18.26■□□□□ 0.51
LINC00271-202ENST00000436554 KCNA6P17658 529 aa18.26■□□□□ 0.51
LINC00271-202ENST00000436554 PROSER2Q86WR7 435 aaPredicted RBP18.26■□□□□ 0.51
LINC00271-202ENST00000436554 SLC26A8Q96RN1 970 aa18.26■□□□□ 0.51
LINC00271-202ENST00000436554 KIF15Q9NS87 1388 aa18.26■□□□□ 0.51
LINC00271-202ENST00000436554 EIF2AK4Q9P2K8 1649 aaKnown RBP18.26■□□□□ 0.51
LINC00271-202ENST00000436554 DUOX2Q9NRD8 1548 aa18.25■□□□□ 0.51
LINC00271-202ENST00000436554 TMEM94Q12767 1356 aa18.25■□□□□ 0.51
LINC00271-202ENST00000436554 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
LINC00271-202ENST00000436554 CEP152O94986 1710 aa18.23■□□□□ 0.51
LINC00271-202ENST00000436554 ABCC5O15440 1437 aa18.22■□□□□ 0.51
LINC00271-202ENST00000436554 KANK1Q14678 1352 aa18.2■□□□□ 0.5
LINC00271-202ENST00000436554 CHIC2Q9UKJ5 165 aa18.2■□□□□ 0.5
LINC00271-202ENST00000436554 BCANQ96GW7 911 aa18.19■□□□□ 0.5
LINC00271-202ENST00000436554 ERBINQ96RT1 1412 aa18.19■□□□□ 0.5
LINC00271-202ENST00000436554 XIRP1Q702N8 1843 aaKnown RBP18.19■□□□□ 0.5
LINC00271-202ENST00000436554 SLAIN2Q9P270 581 aa18.17■□□□□ 0.5
LINC00271-202ENST00000436554 PIK3C2BO00750 1634 aa18.16■□□□□ 0.5
LINC00271-202ENST00000436554 PRDM15P57071 1507 aaPredicted RBP18.16■□□□□ 0.5
LINC00271-202ENST00000436554 MAP3K1Q13233 1512 aa18.16■□□□□ 0.5
LINC00271-202ENST00000436554 EFCAB6Q5THR3 1501 aa18.14■□□□□ 0.49
LINC00271-202ENST00000436554 SLC52A1Q9NWF4 448 aa18.14■□□□□ 0.49
LINC00271-202ENST00000436554 TET3O43151 1660 aa18.13■□□□□ 0.49
LINC00271-202ENST00000436554 APLP2Q06481 763 aa18.12■□□□□ 0.49
LINC00271-202ENST00000436554 ANKRD30AQ9BXX3 1397 aa18.12■□□□□ 0.49
LINC00271-202ENST00000436554 DAPK1P53355 1430 aa18.12■□□□□ 0.49
LINC00271-202ENST00000436554 MSH6P52701 1360 aa18.11■□□□□ 0.49
LINC00271-202ENST00000436554 ROBO1Q9Y6N7 1651 aa18.1■□□□□ 0.49
LINC00271-202ENST00000436554 NOS1P29475 1434 aa18.1■□□□□ 0.49
LINC00271-202ENST00000436554 LMTK2Q8IWU2 1503 aa18.08■□□□□ 0.49
LINC00271-202ENST00000436554 JCADQ9P266 1359 aa18.08■□□□□ 0.49
LINC00271-202ENST00000436554 HDGFP51858 240 aaKnown RBP18.08■□□□□ 0.48
LINC00271-202ENST00000436554 PTPN23Q9H3S7 1636 aa18.08■□□□□ 0.48
LINC00271-202ENST00000436554 PPP1R15AO75807 674 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms