RNA–Protein interactions for RNA: ENST00000436542.6

LRRC49-202, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 2,294 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-202ENST00000436542 IGSF3O75054 1194 aa3.56□□□□□ -1.84
LRRC49-202ENST00000436542 CCDC82Q8N4S0 544 aa3.56□□□□□ -1.84
LRRC49-202ENST00000436542 ZFP91Q96JP5 570 aaPredicted RBP3.56□□□□□ -1.84
LRRC49-202ENST00000436542 AK7Q96M32 723 aa3.56□□□□□ -1.84
LRRC49-202ENST00000436542 TREML4Q6UXN2 200 aa3.55□□□□□ -1.84
LRRC49-202ENST00000436542 DCAF8Q5TAQ9 597 aa3.55□□□□□ -1.84
LRRC49-202ENST00000436542 FLIIQ13045 1269 aa3.54□□□□□ -1.84
LRRC49-202ENST00000436542 SMYD5Q6GMV2 418 aa3.54□□□□□ -1.84
LRRC49-202ENST00000436542 RGS22Q8NE09 1264 aa3.54□□□□□ -1.84
LRRC49-202ENST00000436542 TRAIPQ9BWF2 469 aa3.54□□□□□ -1.84
LRRC49-202ENST00000436542 NUBP1P53384 320 aa3.54□□□□□ -1.84
LRRC49-202ENST00000436542 E2F4Q16254 413 aa3.54□□□□□ -1.84
LRRC49-202ENST00000436542 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
LRRC49-202ENST00000436542 NRG2O14511 850 aaPredicted RBP3.53□□□□□ -1.85
LRRC49-202ENST00000436542 EIF5BO60841 1220 aaKnown RBP3.53□□□□□ -1.85
LRRC49-202ENST00000436542 AEBP1Q8IUX7 1158 aa3.53□□□□□ -1.85
LRRC49-202ENST00000436542 MTMR7Q9Y216 660 aa3.53□□□□□ -1.85
LRRC49-202ENST00000436542 HMGB1P09429 215 aaKnown RBP3.52□□□□□ -1.85
LRRC49-202ENST00000436542 TMCO4Q5TGY1 634 aa3.52□□□□□ -1.85
LRRC49-202ENST00000436542 KRI1Q8N9T8 703 aaKnown RBP3.52□□□□□ -1.85
LRRC49-202ENST00000436542 ZNF316A6NFI3 1004 aaPredicted RBP3.51□□□□□ -1.85
LRRC49-202ENST00000436542 TRAK2O60296 914 aa3.51□□□□□ -1.85
LRRC49-202ENST00000436542 PDE4DQ08499 809 aa3.51□□□□□ -1.85
LRRC49-202ENST00000436542 FAM181BA6NEQ2 426 aa3.51□□□□□ -1.85
LRRC49-202ENST00000436542 A6NJR5 290 aa3.51□□□□□ -1.85
LRRC49-202ENST00000436542 CHRM1P11229 460 aaPredicted RBP3.51□□□□□ -1.85
LRRC49-202ENST00000436542 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
LRRC49-202ENST00000436542 KCTD12Q96CX2 325 aaKnown RBP3.51□□□□□ -1.85
LRRC49-202ENST00000436542 TRIM66O15016 1216 aa3.5□□□□□ -1.85
LRRC49-202ENST00000436542 CDK11BP21127 795 aaKnown RBP3.5□□□□□ -1.85
LRRC49-202ENST00000436542 RBM25P49756 843 aaKnown RBP3.5□□□□□ -1.85
LRRC49-202ENST00000436542 FAM212AQ96EL1 285 aa3.5□□□□□ -1.85
LRRC49-202ENST00000436542 FAM117AQ9C073 453 aa3.5□□□□□ -1.85
LRRC49-202ENST00000436542 CDK11AQ9UQ88 783 aaPredicted RBP3.5□□□□□ -1.85
LRRC49-202ENST00000436542 G3V3G9 751 aa3.5□□□□□ -1.85
LRRC49-202ENST00000436542 HSP90B1P14625 803 aaKnown RBP3.5□□□□□ -1.85
LRRC49-202ENST00000436542 MFAP1P55081 439 aaKnown RBP3.5□□□□□ -1.85
LRRC49-202ENST00000436542 FOXD4L5Q5VV16 416 aaPredicted RBP3.5□□□□□ -1.85
LRRC49-202ENST00000436542 GPIHBP1Q8IV16 184 aa3.5□□□□□ -1.85
LRRC49-202ENST00000436542 FOXD4L4Q8WXT5 416 aaPredicted RBP3.5□□□□□ -1.85
LRRC49-202ENST00000436542 CLUAP1Q96AJ1 413 aa3.5□□□□□ -1.85
LRRC49-202ENST00000436542 ONECUT3O60422 494 aaPredicted RBP3.49□□□□□ -1.85
LRRC49-202ENST00000436542 ZNF428Q96B54 188 aa3.49□□□□□ -1.85
LRRC49-202ENST00000436542 STAC3Q96MF2 364 aa3.49□□□□□ -1.85
LRRC49-202ENST00000436542 PDCD7Q8N8D1 485 aaKnown RBP3.48□□□□□ -1.85
LRRC49-202ENST00000436542 GZF1Q9H116 711 aaPredicted RBP3.48□□□□□ -1.85
LRRC49-202ENST00000436542 PLEKHG3A1L390 1219 aa3.47□□□□□ -1.85
LRRC49-202ENST00000436542 RBM26Q5T8P6 1007 aaKnown RBP3.47□□□□□ -1.85
LRRC49-202ENST00000436542 ADGRD1Q6QNK2 874 aa3.47□□□□□ -1.85
LRRC49-202ENST00000436542 DDRGK1Q96HY6 314 aa3.47□□□□□ -1.85
LRRC49-202ENST00000436542 CCDC97Q96F63 343 aaPredicted RBP3.47□□□□□ -1.85
LRRC49-202ENST00000436542 KRTAP4-5Q9BYR2 181 aa3.47□□□□□ -1.85
LRRC49-202ENST00000436542 LCE2AQ5TA79 106 aaPredicted RBP3.46□□□□□ -1.85
LRRC49-202ENST00000436542 IFNL1Q8IU54 200 aa3.46□□□□□ -1.85
LRRC49-202ENST00000436542 PUS7Q96PZ0 661 aaKnown RBP3.46□□□□□ -1.85
LRRC49-202ENST00000436542 SERPINA10Q9UK55 444 aa3.46□□□□□ -1.85
LRRC49-202ENST00000436542 E9PSI1 815 aa3.46□□□□□ -1.86
LRRC49-202ENST00000436542 PTPN5P54829 565 aa3.46□□□□□ -1.86
LRRC49-202ENST00000436542 RETREG2Q8NC44 543 aa3.46□□□□□ -1.86
LRRC49-202ENST00000436542 ZNF777Q9ULD5 760 aaPredicted RBP3.46□□□□□ -1.86
LRRC49-202ENST00000436542 PYGBP11216 843 aa3.45□□□□□ -1.86
LRRC49-202ENST00000436542 PROSER2Q86WR7 435 aaPredicted RBP3.45□□□□□ -1.86
LRRC49-202ENST00000436542 FBXW7Q969H0 707 aa3.45□□□□□ -1.86
LRRC49-202ENST00000436542 MFRPQ9BY79 579 aa3.45□□□□□ -1.86
LRRC49-202ENST00000436542 IRF5Q13568 498 aa3.44□□□□□ -1.86
LRRC49-202ENST00000436542 ARIH1Q9Y4X5 557 aaPredicted RBP3.44□□□□□ -1.86
LRRC49-202ENST00000436542 WIPF1O43516 503 aa3.44□□□□□ -1.86
LRRC49-202ENST00000436542 MLLT3P42568 568 aaPredicted RBP3.44□□□□□ -1.86
LRRC49-202ENST00000436542 MCM6Q14566 821 aa3.44□□□□□ -1.86
LRRC49-202ENST00000436542 GPR153Q6NV75 609 aa3.44□□□□□ -1.86
LRRC49-202ENST00000436542 GOPCQ9HD26 462 aa3.44□□□□□ -1.86
LRRC49-202ENST00000436542 RASEFQ8IZ41 740 aa3.43□□□□□ -1.86
LRRC49-202ENST00000436542 PPP1R37O75864 691 aa3.42□□□□□ -1.86
LRRC49-202ENST00000436542 GOLGA2Q08379 1002 aa3.42□□□□□ -1.86
LRRC49-202ENST00000436542 USP35Q9P2H5 1018 aa3.42□□□□□ -1.86
LRRC49-202ENST00000436542 NCKAP5LQ9HCH0 1330 aa3.42□□□□□ -1.86
LRRC49-202ENST00000436542 TK2O00142 265 aa3.42□□□□□ -1.86
LRRC49-202ENST00000436542 PARP9Q8IXQ6 854 aa3.42□□□□□ -1.86
LRRC49-202ENST00000436542 LARP6Q9BRS8 491 aaKnown RBP3.42□□□□□ -1.86
LRRC49-202ENST00000436542 WFS1O76024 890 aa3.41□□□□□ -1.86
LRRC49-202ENST00000436542 FNBP4Q8N3X1 1017 aaPredicted RBP3.41□□□□□ -1.86
LRRC49-202ENST00000436542 PCMTD1Q96MG8 357 aaPredicted RBP3.41□□□□□ -1.86
LRRC49-202ENST00000436542 MFSD10Q14728 455 aa3.41□□□□□ -1.86
LRRC49-202ENST00000436542 CHMP4AQ9BY43 222 aa3.41□□□□□ -1.86
LRRC49-202ENST00000436542 PATL2C9JE40 543 aaKnown RBP3.4□□□□□ -1.86
LRRC49-202ENST00000436542 PDE4AP27815 886 aa3.4□□□□□ -1.86
LRRC49-202ENST00000436542 AMHR2Q16671 573 aa3.4□□□□□ -1.86
LRRC49-202ENST00000436542 CCDC102AQ96A19 550 aa3.4□□□□□ -1.86
LRRC49-202ENST00000436542 POM121Q96HA1 1249 aa3.4□□□□□ -1.86
LRRC49-202ENST00000436542 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.86
LRRC49-202ENST00000436542 MINK1Q8N4C8 1332 aaPredicted RBP3.4□□□□□ -1.87
LRRC49-202ENST00000436542 PDAP1Q13442 181 aaKnown RBP3.4□□□□□ -1.87
LRRC49-202ENST00000436542 ZNF467Q7Z7K2 595 aaPredicted RBP3.4□□□□□ -1.87
LRRC49-202ENST00000436542 DDX27Q96GQ7 796 aaKnown RBP3.4□□□□□ -1.87
LRRC49-202ENST00000436542 GPR37O15354 613 aa3.39□□□□□ -1.87
LRRC49-202ENST00000436542 PDE4CQ08493 712 aa3.39□□□□□ -1.87
LRRC49-202ENST00000436542 CAMK2BQ13554 666 aa3.39□□□□□ -1.87
LRRC49-202ENST00000436542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.39□□□□□ -1.87
LRRC49-202ENST00000436542 AMOTL2Q9Y2J4 779 aa3.39□□□□□ -1.87
LRRC49-202ENST00000436542 MAP2K5Q13163 448 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms