RNA–Protein interactions for RNA: ENST00000436539.1

AP006285.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP006285.1, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP006285.1-201ENST00000436539 PTPRMP28827 1452 aa16.29■□□□□ 0.2
AP006285.1-201ENST00000436539 MROH1Q8NDA8 1641 aa16.28■□□□□ 0.2
AP006285.1-201ENST00000436539 KIF3BO15066 747 aa16.28■□□□□ 0.2
AP006285.1-201ENST00000436539 PRDM15P57071 1507 aaPredicted RBP16.27■□□□□ 0.2
AP006285.1-201ENST00000436539 CNTLNQ9NXG0 1405 aa16.27■□□□□ 0.19
AP006285.1-201ENST00000436539 ANKRD50Q9ULJ7 1429 aa16.27■□□□□ 0.19
AP006285.1-201ENST00000436539 DEPDC5O75140 1603 aa16.27■□□□□ 0.19
AP006285.1-201ENST00000436539 KDM5DQ9BY66 1539 aa16.26■□□□□ 0.19
AP006285.1-201ENST00000436539 MROH2AA6NES4 1674 aa16.26■□□□□ 0.19
AP006285.1-201ENST00000436539 CLTCQ00610 1675 aaKnown RBP16.25■□□□□ 0.19
AP006285.1-201ENST00000436539 GCC2Q8IWJ2 1684 aa16.25■□□□□ 0.19
AP006285.1-201ENST00000436539 GGT6Q6P531 493 aa16.25■□□□□ 0.19
AP006285.1-201ENST00000436539 ZC3H13Q5T200 1668 aaKnown RBP16.24■□□□□ 0.19
AP006285.1-201ENST00000436539 PPP6R1Q9UPN7 881 aa16.22■□□□□ 0.19
AP006285.1-201ENST00000436539 ABCC3O15438 1527 aa16.22■□□□□ 0.19
AP006285.1-201ENST00000436539 C3P01024 1663 aa16.21■□□□□ 0.19
AP006285.1-201ENST00000436539 ESF1Q9H501 851 aaKnown RBP16.21■□□□□ 0.19
AP006285.1-201ENST00000436539 UNC13BO14795 1591 aa16.21■□□□□ 0.18
AP006285.1-201ENST00000436539 HFM1A2PYH4 1435 aa16.2■□□□□ 0.18
AP006285.1-201ENST00000436539 NAIPQ13075 1403 aa16.19■□□□□ 0.18
AP006285.1-201ENST00000436539 CEP152O94986 1710 aa16.19■□□□□ 0.18
AP006285.1-201ENST00000436539 VWDEQ8N2E2 1590 aa16.19■□□□□ 0.18
AP006285.1-201ENST00000436539 CAMSAP1Q5T5Y3 1602 aa16.17■□□□□ 0.18
AP006285.1-201ENST00000436539 ZMYM3Q14202 1370 aa16.16■□□□□ 0.18
AP006285.1-201ENST00000436539 KANK1Q14678 1352 aa16.16■□□□□ 0.18
AP006285.1-201ENST00000436539 LMTK2Q8IWU2 1503 aa16.16■□□□□ 0.18
AP006285.1-201ENST00000436539 WASHC2CQ9Y4E1 1318 aa16.16■□□□□ 0.18
AP006285.1-201ENST00000436539 PZPP20742 1482 aa16.15■□□□□ 0.18
AP006285.1-201ENST00000436539 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
AP006285.1-201ENST00000436539 NPATQ14207 1427 aa16.13■□□□□ 0.17
AP006285.1-201ENST00000436539 IQGAP3Q86VI3 1631 aa16.13■□□□□ 0.17
AP006285.1-201ENST00000436539 CEBPAP49715 358 aaPredicted RBP16.13■□□□□ 0.17
AP006285.1-201ENST00000436539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.17
AP006285.1-201ENST00000436539 EFCAB6Q5THR3 1501 aa16.12■□□□□ 0.17
AP006285.1-201ENST00000436539 TET3O43151 1660 aa16.11■□□□□ 0.17
AP006285.1-201ENST00000436539 PREX1Q8TCU6 1659 aa16.11■□□□□ 0.17
AP006285.1-201ENST00000436539 ARHGAP31Q2M1Z3 1444 aa16.1■□□□□ 0.17
AP006285.1-201ENST00000436539 MYO3AQ8NEV4 1616 aa16.08■□□□□ 0.17
AP006285.1-201ENST00000436539 ERVK-7P63135 1459 aa16.08■□□□□ 0.16
AP006285.1-201ENST00000436539 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.16
AP006285.1-201ENST00000436539 SPATA31D1Q6ZQQ2 1576 aa16.08■□□□□ 0.16
AP006285.1-201ENST00000436539 SETD1BQ9UPS6 1966 aaKnown RBP16.07■□□□□ 0.16
AP006285.1-201ENST00000436539 NUP155O75694 1391 aa16.07■□□□□ 0.16
AP006285.1-201ENST00000436539 UHRF1BP1Q6BDS2 1440 aa16.06■□□□□ 0.16
AP006285.1-201ENST00000436539 SETD5Q9C0A6 1442 aa16.06■□□□□ 0.16
AP006285.1-201ENST00000436539 ZNF142P52746 1687 aaPredicted RBP16.05■□□□□ 0.16
AP006285.1-201ENST00000436539 RPRD2Q5VT52 1461 aaKnown RBP16.05■□□□□ 0.16
AP006285.1-201ENST00000436539 TNRQ92752 1358 aa16.04■□□□□ 0.16
AP006285.1-201ENST00000436539 FBXO31Q5XUX0 539 aaPredicted RBP16.04■□□□□ 0.16
AP006285.1-201ENST00000436539 E9PCH4 1651 aa16.04■□□□□ 0.16
AP006285.1-201ENST00000436539 CEP170BQ9Y4F5 1589 aaPredicted RBP16.02■□□□□ 0.16
AP006285.1-201ENST00000436539 RAB3GAP2Q9H2M9 1393 aa16.01■□□□□ 0.15
AP006285.1-201ENST00000436539 CFAP65Q6ZU64 1925 aaKnown RBP16.01■□□□□ 0.15
AP006285.1-201ENST00000436539 NOS1P29475 1434 aa16.01■□□□□ 0.15
AP006285.1-201ENST00000436539 SYNMO15061 1565 aa16■□□□□ 0.15
AP006285.1-201ENST00000436539 NLRP1Q9C000 1473 aa16■□□□□ 0.15
AP006285.1-201ENST00000436539 TRIM52Q96A61 297 aa15.99■□□□□ 0.15
AP006285.1-201ENST00000436539 A2ML1A8K2U0 1454 aa15.98■□□□□ 0.15
AP006285.1-201ENST00000436539 ACIN1Q9UKV3 1341 aaKnown RBP15.97■□□□□ 0.15
AP006285.1-201ENST00000436539 TRIM26Q12899 539 aaPredicted RBP15.97■□□□□ 0.15
AP006285.1-201ENST00000436539 SPHKAPQ2M3C7 1700 aa15.96■□□□□ 0.15
AP006285.1-201ENST00000436539 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
AP006285.1-201ENST00000436539 UGGT1Q9NYU2 1555 aa15.93■□□□□ 0.14
AP006285.1-201ENST00000436539 HSPA2P54652 639 aa15.93■□□□□ 0.14
AP006285.1-201ENST00000436539 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
AP006285.1-201ENST00000436539 TRPM2O94759 1503 aa15.93■□□□□ 0.14
AP006285.1-201ENST00000436539 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
AP006285.1-201ENST00000436539 PTPRTO14522 1441 aa15.92■□□□□ 0.14
AP006285.1-201ENST00000436539 ADGRB3O60242 1522 aa15.91■□□□□ 0.14
AP006285.1-201ENST00000436539 HRCP23327 699 aa15.91■□□□□ 0.14
AP006285.1-201ENST00000436539 PKD2Q13563 968 aa15.91■□□□□ 0.14
AP006285.1-201ENST00000436539 KDM5AP29375 1690 aaKnown RBP15.91■□□□□ 0.14
AP006285.1-201ENST00000436539 PLA2R1Q13018 1463 aa15.91■□□□□ 0.14
AP006285.1-201ENST00000436539 MPHOSPH9Q99550 1183 aa15.89■□□□□ 0.13
AP006285.1-201ENST00000436539 SLC52A1Q9NWF4 448 aa15.88■□□□□ 0.13
AP006285.1-201ENST00000436539 CLTCL1P53675 1640 aa15.87■□□□□ 0.13
AP006285.1-201ENST00000436539 IDI1Q13907 227 aa15.87■□□□□ 0.13
AP006285.1-201ENST00000436539 STRCQ7RTU9 1775 aa15.87■□□□□ 0.13
AP006285.1-201ENST00000436539 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
AP006285.1-201ENST00000436539 POLR1AO95602 1720 aaPredicted RBP15.85■□□□□ 0.13
AP006285.1-201ENST00000436539 ARHGAP23Q9P227 1491 aa15.84■□□□□ 0.13
AP006285.1-201ENST00000436539 SLIT1O75093 1534 aa15.84■□□□□ 0.13
AP006285.1-201ENST00000436539 FOXD1Q16676 465 aa15.84■□□□□ 0.13
AP006285.1-201ENST00000436539 THEMISQ8N1K5 641 aaPredicted RBP15.84■□□□□ 0.13
AP006285.1-201ENST00000436539 MYO5BQ9ULV0 1848 aa15.84■□□□□ 0.13
AP006285.1-201ENST00000436539 NEURL4Q96JN8 1562 aa15.83■□□□□ 0.12
AP006285.1-201ENST00000436539 STAG3Q9UJ98 1225 aa15.82■□□□□ 0.12
AP006285.1-201ENST00000436539 CCDC144AA2RUR9 1427 aa15.81■□□□□ 0.12
AP006285.1-201ENST00000436539 TMEM2Q9UHN6 1383 aa15.81■□□□□ 0.12
AP006285.1-201ENST00000436539 SCAF11Q99590 1463 aaKnown RBP15.8■□□□□ 0.12
AP006285.1-201ENST00000436539 KIF1BO60333 1816 aa15.8■□□□□ 0.12
AP006285.1-201ENST00000436539 ZFYVE9O95405 1425 aa15.78■□□□□ 0.12
AP006285.1-201ENST00000436539 MED14O60244 1454 aa15.78■□□□□ 0.12
AP006285.1-201ENST00000436539 NCKAP5LQ9HCH0 1330 aa15.77■□□□□ 0.12
AP006285.1-201ENST00000436539 CHGAP10645 457 aaKnown RBP15.77■□□□□ 0.12
AP006285.1-201ENST00000436539 ANKLE2Q86XL3 938 aa15.77■□□□□ 0.12
AP006285.1-201ENST00000436539 IQGAP1P46940 1657 aa15.76■□□□□ 0.11
AP006285.1-201ENST00000436539 ANKRD30BQ9BXX2 1392 aa15.76■□□□□ 0.11
AP006285.1-201ENST00000436539 NPHP4O75161 1426 aaPredicted RBP15.76■□□□□ 0.11
AP006285.1-201ENST00000436539 RIMS2Q9UQ26 1411 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms