RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.08■■□□□ 1.611e-7■■■■□ 21.1
CALD1-209ENST00000436461 MROH1Q8NDA8 1641 aa25.08■■□□□ 1.61
CALD1-209ENST00000436461 RNF17Q9BXT8 1623 aaKnown RBP25.08■■□□□ 1.61
CALD1-209ENST00000436461 DEPDC5O75140 1603 aa25.07■■□□□ 1.6
CALD1-209ENST00000436461 UNC13BO14795 1591 aa25.05■■□□□ 1.6
CALD1-209ENST00000436461 TRIM52Q96A61 297 aa25.02■■□□□ 1.6
CALD1-209ENST00000436461 PRDM15P57071 1507 aaPredicted RBP25.02■■□□□ 1.6
CALD1-209ENST00000436461 CEP152O94986 1710 aa25.01■■□□□ 1.59
CALD1-209ENST00000436461 NUP155O75694 1391 aa24.98■■□□□ 1.59
CALD1-209ENST00000436461 CLTCQ00610 1675 aaKnown RBP24.96■■□□□ 1.59
CALD1-209ENST00000436461 FER1L4A9Z1Z3 1794 aa24.96■■□□□ 1.59
CALD1-209ENST00000436461 IQGAP3Q86VI3 1631 aa24.95■■□□□ 1.58
CALD1-209ENST00000436461 VWDEQ8N2E2 1590 aa24.95■■□□□ 1.58
CALD1-209ENST00000436461 MADDQ8WXG6 1647 aa24.95■■□□□ 1.58
CALD1-209ENST00000436461 ADAMTSL3P82987 1691 aa24.94■■□□□ 1.58
CALD1-209ENST00000436461 ABCC3O15438 1527 aa24.93■■□□□ 1.58
CALD1-209ENST00000436461 FAM135AQ9P2D6 1515 aa24.93■■□□□ 1.58
CALD1-209ENST00000436461 KANK1Q14678 1352 aa24.93■■□□□ 1.58
CALD1-209ENST00000436461 WASHC2CQ9Y4E1 1318 aa24.93■■□□□ 1.58
CALD1-209ENST00000436461 KDM5DQ9BY66 1539 aa24.93■■□□□ 1.58
CALD1-209ENST00000436461 PZPP20742 1482 aa24.92■■□□□ 1.58
CALD1-209ENST00000436461 HRCP23327 699 aa24.91■■□□□ 1.58
CALD1-209ENST00000436461 ZC3H13Q5T200 1668 aaKnown RBP24.91■■□□□ 1.58
CALD1-209ENST00000436461 RIMS1Q86UR5 1692 aaKnown RBP24.9■■□□□ 1.58
CALD1-209ENST00000436461 CAMSAP1Q5T5Y3 1602 aa24.89■■□□□ 1.57
CALD1-209ENST00000436461 ESF1Q9H501 851 aaKnown RBP24.88■■□□□ 1.57
CALD1-209ENST00000436461 SLC4A1APQ9BWU0 796 aaKnown RBP24.86■■□□□ 1.57
CALD1-209ENST00000436461 TET3O43151 1660 aa24.86■■□□□ 1.57
CALD1-209ENST00000436461 CFAP65Q6ZU64 1925 aaKnown RBP24.86■■□□□ 1.57
CALD1-209ENST00000436461 MPHOSPH9Q99550 1183 aa24.86■■□□□ 1.57
CALD1-209ENST00000436461 LMTK2Q8IWU2 1503 aa24.86■■□□□ 1.57
CALD1-209ENST00000436461 PPP6R1Q9UPN7 881 aa24.85■■□□□ 1.57
CALD1-209ENST00000436461 PLPPR3Q6T4P5 718 aa24.84■■□□□ 1.57
CALD1-209ENST00000436461 E9PCH4 1651 aa24.84■■□□□ 1.57
CALD1-209ENST00000436461 EFCAB6Q5THR3 1501 aa24.84■■□□□ 1.57
CALD1-209ENST00000436461 FOXD1Q16676 465 aa24.83■■□□□ 1.57
CALD1-209ENST00000436461 KDM4FA0A1W2PPD8 638 aa24.83■■□□□ 1.56
CALD1-209ENST00000436461 MROH2AA6NES4 1674 aa24.82■■□□□ 1.56
CALD1-209ENST00000436461 C3P01024 1663 aa24.81■■□□□ 1.56
CALD1-209ENST00000436461 CNTLNQ9NXG0 1405 aa24.8■■□□□ 1.56
CALD1-209ENST00000436461 ZMYM3Q14202 1370 aa24.8■■□□□ 1.56
CALD1-209ENST00000436461 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
CALD1-209ENST00000436461 PKD2Q13563 968 aa24.8■■□□□ 1.56
CALD1-209ENST00000436461 NPATQ14207 1427 aa24.8■■□□□ 1.56
CALD1-209ENST00000436461 DHX57Q6P158 1386 aaKnown RBP24.79■■□□□ 1.56
CALD1-209ENST00000436461 ACIN1Q9UKV3 1341 aaKnown RBP24.79■■□□□ 1.56
CALD1-209ENST00000436461 FBXO31Q5XUX0 539 aaPredicted RBP24.75■■□□□ 1.55
CALD1-209ENST00000436461 PTPRMP28827 1452 aa24.73■■□□□ 1.55
CALD1-209ENST00000436461 ARHGAP31Q2M1Z3 1444 aa24.73■■□□□ 1.55
CALD1-209ENST00000436461 PREX1Q8TCU6 1659 aa24.73■■□□□ 1.55
CALD1-209ENST00000436461 SPHKAPQ2M3C7 1700 aa24.71■■□□□ 1.55
CALD1-209ENST00000436461 RPRD2Q5VT52 1461 aaKnown RBP24.7■■□□□ 1.54
CALD1-209ENST00000436461 ERVK-7P63135 1459 aa24.69■■□□□ 1.54
CALD1-209ENST00000436461 SYNMO15061 1565 aa24.66■■□□□ 1.54
CALD1-209ENST00000436461 PLA2R1Q13018 1463 aa24.66■■□□□ 1.54
CALD1-209ENST00000436461 SPATA31D1Q6ZQQ2 1576 aa24.66■■□□□ 1.54
CALD1-209ENST00000436461 UGGT1Q9NYU2 1555 aa24.66■■□□□ 1.54
CALD1-209ENST00000436461 NOS1P29475 1434 aa24.65■■□□□ 1.54
CALD1-209ENST00000436461 CCER1Q8TC90 406 aaPredicted RBP24.62■■□□□ 1.53
CALD1-209ENST00000436461 PTPRTO14522 1441 aa24.62■■□□□ 1.53
CALD1-209ENST00000436461 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
CALD1-209ENST00000436461 TRPM2O94759 1503 aa24.61■■□□□ 1.53
CALD1-209ENST00000436461 TNRQ92752 1358 aa24.6■■□□□ 1.53
CALD1-209ENST00000436461 CLTCL1P53675 1640 aa24.59■■□□□ 1.53
CALD1-209ENST00000436461 SIN3AQ96ST3 1273 aa24.56■■□□□ 1.52
CALD1-209ENST00000436461 PIK3C2BO00750 1634 aa24.56■■□□□ 1.52
CALD1-209ENST00000436461 MYO3AQ8NEV4 1616 aa24.56■■□□□ 1.52
CALD1-209ENST00000436461 CCDC144AA2RUR9 1427 aa24.54■■□□□ 1.52
CALD1-209ENST00000436461 IDI1Q13907 227 aa24.53■■□□□ 1.52
CALD1-209ENST00000436461 SETD1BQ9UPS6 1966 aaKnown RBP24.52■■□□□ 1.52
CALD1-209ENST00000436461 MYO5BQ9ULV0 1848 aa24.51■■□□□ 1.51
CALD1-209ENST00000436461 NEUROD1Q13562 356 aa24.5■■□□□ 1.51
CALD1-209ENST00000436461 KIF1BO60333 1816 aa24.49■■□□□ 1.51
CALD1-209ENST00000436461 CHGAP10645 457 aaKnown RBP24.49■■□□□ 1.51
CALD1-209ENST00000436461 SLC52A1Q9NWF4 448 aa24.49■■□□□ 1.51
CALD1-209ENST00000436461 NLRP1Q9C000 1473 aa24.46■■□□□ 1.51
CALD1-209ENST00000436461 CEP170BQ9Y4F5 1589 aaPredicted RBP24.46■■□□□ 1.51
CALD1-209ENST00000436461 UBR1Q8IWV7 1749 aa24.45■■□□□ 1.5
CALD1-209ENST00000436461 TMEM131LA2VDJ0 1609 aa24.45■■□□□ 1.5
CALD1-209ENST00000436461 ZNF142P52746 1687 aaPredicted RBP24.44■■□□□ 1.5
CALD1-209ENST00000436461 UHRF1BP1Q6BDS2 1440 aa24.44■■□□□ 1.5
CALD1-209ENST00000436461 ADGRB3O60242 1522 aa24.44■■□□□ 1.5
CALD1-209ENST00000436461 STAG3Q9UJ98 1225 aa24.43■■□□□ 1.5
CALD1-209ENST00000436461 A2ML1A8K2U0 1454 aa24.42■■□□□ 1.5
CALD1-209ENST00000436461 RGL3Q3MIN7 710 aa24.42■■□□□ 1.5
CALD1-209ENST00000436461 CLSPNQ9HAW4 1339 aa24.41■■□□□ 1.5
CALD1-209ENST00000436461 SPATA31E1Q6ZUB1 1445 aa24.4■■□□□ 1.5
CALD1-209ENST00000436461 ZNF326Q5BKZ1 582 aaKnown RBP24.37■■□□□ 1.49
CALD1-209ENST00000436461 KDM5AP29375 1690 aaKnown RBP24.37■■□□□ 1.49
CALD1-209ENST00000436461 LMTK3Q96Q04 1460 aa24.36■■□□□ 1.49
CALD1-209ENST00000436461 NUTM2DQ5VT03 806 aaPredicted RBP24.33■■□□□ 1.49
CALD1-209ENST00000436461 HSPA2P54652 639 aa24.32■■□□□ 1.48
CALD1-209ENST00000436461 NEURL4Q96JN8 1562 aa24.31■■□□□ 1.48
CALD1-209ENST00000436461 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
CALD1-209ENST00000436461 THEMISQ8N1K5 641 aaPredicted RBP24.3■■□□□ 1.48
CALD1-209ENST00000436461 IFT172Q9UG01 1749 aa24.3■■□□□ 1.48
CALD1-209ENST00000436461 NEXMIFQ5QGS0 1516 aa24.3■■□□□ 1.48
CALD1-209ENST00000436461 PPLO60437 1756 aa24.3■■□□□ 1.48
CALD1-209ENST00000436461 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
CALD1-209ENST00000436461 SENP3Q9H4L4 574 aaPredicted RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms