RNA–Protein interactions for RNA: ENST00000430317.2

COL6A4P2-201, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-201ENST00000430317 EIF2AK4Q9P2K8 1649 aaKnown RBP13.39□□□□□ -0.27
COL6A4P2-201ENST00000430317 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
COL6A4P2-201ENST00000430317 ATP10AO60312 1499 aa13.36□□□□□ -0.27
COL6A4P2-201ENST00000430317 A2MP01023 1474 aa13.36□□□□□ -0.27
COL6A4P2-201ENST00000430317 NAIPQ13075 1403 aa13.36□□□□□ -0.27
COL6A4P2-201ENST00000430317 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
COL6A4P2-201ENST00000430317 YEATS2Q9ULM3 1422 aa13.35□□□□□ -0.27
COL6A4P2-201ENST00000430317 DHX29Q7Z478 1369 aaKnown RBP13.34□□□□□ -0.27
COL6A4P2-201ENST00000430317 BCORL1Q5H9F3 1711 aa13.34□□□□□ -0.27
COL6A4P2-201ENST00000430317 SETD5Q9C0A6 1442 aa13.34□□□□□ -0.27
COL6A4P2-201ENST00000430317 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
COL6A4P2-201ENST00000430317 AGLP35573 1532 aa13.34□□□□□ -0.27
COL6A4P2-201ENST00000430317 RRP7BPQ9NSQ0 103 aa13.33□□□□□ -0.28
COL6A4P2-201ENST00000430317 FAM135AQ9P2D6 1515 aa13.31□□□□□ -0.28
COL6A4P2-201ENST00000430317 HRCP23327 699 aa13.31□□□□□ -0.28
COL6A4P2-201ENST00000430317 RNF17Q9BXT8 1623 aaKnown RBP13.3□□□□□ -0.28
COL6A4P2-201ENST00000430317 UNC13BO14795 1591 aa13.29□□□□□ -0.28
COL6A4P2-201ENST00000430317 DEPDC5O75140 1603 aa13.29□□□□□ -0.28
COL6A4P2-201ENST00000430317 RAB3GAP2Q9H2M9 1393 aa13.28□□□□□ -0.28
COL6A4P2-201ENST00000430317 PRDM15P57071 1507 aaPredicted RBP13.28□□□□□ -0.28
COL6A4P2-201ENST00000430317 KANK1Q14678 1352 aa13.27□□□□□ -0.29
COL6A4P2-201ENST00000430317 ZC3H13Q5T200 1668 aaKnown RBP13.26□□□□□ -0.29
COL6A4P2-201ENST00000430317 KDM5DQ9BY66 1539 aa13.26□□□□□ -0.29
COL6A4P2-201ENST00000430317 KIF3BO15066 747 aa13.25□□□□□ -0.29
COL6A4P2-201ENST00000430317 ARID4BQ4LE39 1312 aaPredicted RBP13.23□□□□□ -0.29
COL6A4P2-201ENST00000430317 IQGAP3Q86VI3 1631 aa13.23□□□□□ -0.29
COL6A4P2-201ENST00000430317 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
COL6A4P2-201ENST00000430317 MROH1Q8NDA8 1641 aa13.21□□□□□ -0.29
COL6A4P2-201ENST00000430317 VWDEQ8N2E2 1590 aa13.21□□□□□ -0.29
COL6A4P2-201ENST00000430317 CNTLNQ9NXG0 1405 aa13.21□□□□□ -0.3
COL6A4P2-201ENST00000430317 NUP155O75694 1391 aa13.2□□□□□ -0.3
COL6A4P2-201ENST00000430317 LMTK2Q8IWU2 1503 aa13.2□□□□□ -0.3
COL6A4P2-201ENST00000430317 TRIM52Q96A61 297 aa13.2□□□□□ -0.3
COL6A4P2-201ENST00000430317 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
COL6A4P2-201ENST00000430317 TET3O43151 1660 aa13.19□□□□□ -0.3
COL6A4P2-201ENST00000430317 ESF1Q9H501 851 aaKnown RBP13.19□□□□□ -0.3
COL6A4P2-201ENST00000430317 GGT6Q6P531 493 aa13.18□□□□□ -0.3
COL6A4P2-201ENST00000430317 ABCC3O15438 1527 aa13.18□□□□□ -0.3
COL6A4P2-201ENST00000430317 MROH2AA6NES4 1674 aa13.17□□□□□ -0.3
COL6A4P2-201ENST00000430317 RPRD2Q5VT52 1461 aaKnown RBP13.16□□□□□ -0.3
COL6A4P2-201ENST00000430317 WASHC2CQ9Y4E1 1318 aa13.16□□□□□ -0.3
COL6A4P2-201ENST00000430317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL6A4P2-201ENST00000430317 EFCAB6Q5THR3 1501 aa13.16□□□□□ -0.3
COL6A4P2-201ENST00000430317 FER1L4A9Z1Z3 1794 aa13.16□□□□□ -0.3
COL6A4P2-201ENST00000430317 CAMSAP1Q5T5Y3 1602 aa13.16□□□□□ -0.3
COL6A4P2-201ENST00000430317 PZPP20742 1482 aa13.16□□□□□ -0.3
COL6A4P2-201ENST00000430317 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
COL6A4P2-201ENST00000430317 CEP152O94986 1710 aa13.15□□□□□ -0.3
COL6A4P2-201ENST00000430317 ARHGAP31Q2M1Z3 1444 aa13.14□□□□□ -0.31
COL6A4P2-201ENST00000430317 ADAMTSL3P82987 1691 aa13.13□□□□□ -0.31
COL6A4P2-201ENST00000430317 CLTCQ00610 1675 aaKnown RBP13.13□□□□□ -0.31
COL6A4P2-201ENST00000430317 MLECQ14165 292 aa13.12□□□□□ -0.31
COL6A4P2-201ENST00000430317 MPHOSPH9Q99550 1183 aa13.12□□□□□ -0.31
COL6A4P2-201ENST00000430317 CLSPNQ9HAW4 1339 aa13.12□□□□□ -0.31
COL6A4P2-201ENST00000430317 MADDQ8WXG6 1647 aa13.1□□□□□ -0.31
COL6A4P2-201ENST00000430317 DHX57Q6P158 1386 aaKnown RBP13.1□□□□□ -0.31
COL6A4P2-201ENST00000430317 E9PCH4 1651 aa13.09□□□□□ -0.31
COL6A4P2-201ENST00000430317 NPATQ14207 1427 aa13.08□□□□□ -0.32
COL6A4P2-201ENST00000430317 PKD2Q13563 968 aa13.08□□□□□ -0.32
COL6A4P2-201ENST00000430317 RIMS1Q86UR5 1692 aaKnown RBP13.08□□□□□ -0.32
COL6A4P2-201ENST00000430317 SPHKAPQ2M3C7 1700 aa13.07□□□□□ -0.32
COL6A4P2-201ENST00000430317 TRPM2O94759 1503 aa13.07□□□□□ -0.32
COL6A4P2-201ENST00000430317 SPATA31D1Q6ZQQ2 1576 aa13.06□□□□□ -0.32
COL6A4P2-201ENST00000430317 ZMYM3Q14202 1370 aa13.06□□□□□ -0.32
COL6A4P2-201ENST00000430317 PREX1Q8TCU6 1659 aa13.05□□□□□ -0.32
COL6A4P2-201ENST00000430317 CCER1Q8TC90 406 aaPredicted RBP13.05□□□□□ -0.32
COL6A4P2-201ENST00000430317 C3P01024 1663 aa13.05□□□□□ -0.32
COL6A4P2-201ENST00000430317 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
COL6A4P2-201ENST00000430317 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
COL6A4P2-201ENST00000430317 PTPRTO14522 1441 aa13.04□□□□□ -0.32
COL6A4P2-201ENST00000430317 NOS1P29475 1434 aa13.04□□□□□ -0.32
COL6A4P2-201ENST00000430317 ANKRD30BQ9BXX2 1392 aa13.02□□□□□ -0.33
COL6A4P2-201ENST00000430317 PTPRMP28827 1452 aa13.02□□□□□ -0.33
COL6A4P2-201ENST00000430317 NLRP1Q9C000 1473 aa13□□□□□ -0.33
COL6A4P2-201ENST00000430317 TNRQ92752 1358 aa13□□□□□ -0.33
COL6A4P2-201ENST00000430317 SLC52A1Q9NWF4 448 aa13□□□□□ -0.33
COL6A4P2-201ENST00000430317 PIK3C2BO00750 1634 aa12.99□□□□□ -0.33
COL6A4P2-201ENST00000430317 SYNMO15061 1565 aa12.99□□□□□ -0.33
COL6A4P2-201ENST00000430317 NEURL4Q96JN8 1562 aa12.99□□□□□ -0.33
COL6A4P2-201ENST00000430317 KDM5AP29375 1690 aaKnown RBP12.98□□□□□ -0.33
COL6A4P2-201ENST00000430317 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
COL6A4P2-201ENST00000430317 PLA2R1Q13018 1463 aa12.97□□□□□ -0.33
COL6A4P2-201ENST00000430317 MYO3AQ8NEV4 1616 aa12.96□□□□□ -0.33
COL6A4P2-201ENST00000430317 KIF1BO60333 1816 aa12.96□□□□□ -0.33
COL6A4P2-201ENST00000430317 ADGRB3O60242 1522 aa12.95□□□□□ -0.34
COL6A4P2-201ENST00000430317 SETD1BQ9UPS6 1966 aaKnown RBP12.95□□□□□ -0.34
COL6A4P2-201ENST00000430317 ZNF142P52746 1687 aaPredicted RBP12.95□□□□□ -0.34
COL6A4P2-201ENST00000430317 CFAP65Q6ZU64 1925 aaKnown RBP12.94□□□□□ -0.34
COL6A4P2-201ENST00000430317 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
COL6A4P2-201ENST00000430317 FBXO31Q5XUX0 539 aaPredicted RBP12.93□□□□□ -0.34
COL6A4P2-201ENST00000430317 UHRF1BP1Q6BDS2 1440 aa12.93□□□□□ -0.34
COL6A4P2-201ENST00000430317 CEP170BQ9Y4F5 1589 aaPredicted RBP12.93□□□□□ -0.34
COL6A4P2-201ENST00000430317 TONSLQ96HA7 1378 aa12.93□□□□□ -0.34
COL6A4P2-201ENST00000430317 A2ML1A8K2U0 1454 aa12.92□□□□□ -0.34
COL6A4P2-201ENST00000430317 KDM4FA0A1W2PPD8 638 aa12.92□□□□□ -0.34
COL6A4P2-201ENST00000430317 CEBPAP49715 358 aaPredicted RBP12.92□□□□□ -0.34
COL6A4P2-201ENST00000430317 UGGT1Q9NYU2 1555 aa12.92□□□□□ -0.34
COL6A4P2-201ENST00000430317 STAG3Q9UJ98 1225 aa12.92□□□□□ -0.34
COL6A4P2-201ENST00000430317 STAC3Q96MF2 364 aa12.91□□□□□ -0.34
COL6A4P2-201ENST00000430317 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms