RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 PLPPR3Q6T4P5 718 aa26.89■■□□□ 1.9
CTSD-203ENST00000429746 ESF1Q9H501 851 aaKnown RBP26.89■■□□□ 1.9
CTSD-203ENST00000429746 KIF3BO15066 747 aa26.88■■□□□ 1.89
CTSD-203ENST00000429746 FAM135AQ9P2D6 1515 aa26.87■■□□□ 1.89
CTSD-203ENST00000429746 GGT6Q6P531 493 aa26.87■■□□□ 1.89
CTSD-203ENST00000429746 ERBINQ96RT1 1412 aa26.87■■□□□ 1.89
CTSD-203ENST00000429746 DEPDC5O75140 1603 aa26.87■■□□□ 1.89
CTSD-203ENST00000429746 PREX1Q8TCU6 1659 aa26.86■■□□□ 1.89
CTSD-203ENST00000429746 CHIC2Q9UKJ5 165 aa26.86■■□□□ 1.89
CTSD-203ENST00000429746 RRP7BPQ9NSQ0 103 aa26.84■■□□□ 1.89
CTSD-203ENST00000429746 PPP6R1Q9UPN7 881 aa26.84■■□□□ 1.89
CTSD-203ENST00000429746 KDM5DQ9BY66 1539 aa26.84■■□□□ 1.89
CTSD-203ENST00000429746 ZMYM3Q14202 1370 aa26.84■■□□□ 1.89
CTSD-203ENST00000429746 ANKRD30AQ9BXX3 1397 aa26.84■■□□□ 1.89
CTSD-203ENST00000429746 PRDM15P57071 1507 aaPredicted RBP26.83■■□□□ 1.89
CTSD-203ENST00000429746 ABCC3O15438 1527 aa26.8■■□□□ 1.88
CTSD-203ENST00000429746 ILDR1Q86SU0 546 aaPredicted RBP26.8■■□□□ 1.88
CTSD-203ENST00000429746 HSPA2P54652 639 aa26.79■■□□□ 1.88
CTSD-203ENST00000429746 ZC3H13Q5T200 1668 aaKnown RBP26.79■■□□□ 1.88
CTSD-203ENST00000429746 ROCK1Q13464 1354 aa26.78■■□□□ 1.88
CTSD-203ENST00000429746 CEP152O94986 1710 aa26.77■■□□□ 1.88
CTSD-203ENST00000429746 VWDEQ8N2E2 1590 aa26.77■■□□□ 1.88
CTSD-203ENST00000429746 NPATQ14207 1427 aa26.76■■□□□ 1.87
CTSD-203ENST00000429746 UHRF1BP1Q6BDS2 1440 aa26.76■■□□□ 1.87
CTSD-203ENST00000429746 PZPP20742 1482 aa26.72■■□□□ 1.87
CTSD-203ENST00000429746 ANKRD50Q9ULJ7 1429 aa26.72■■□□□ 1.87
CTSD-203ENST00000429746 CAMSAP1Q5T5Y3 1602 aa26.71■■□□□ 1.87
CTSD-203ENST00000429746 MYO3AQ8NEV4 1616 aa26.68■■□□□ 1.86
CTSD-203ENST00000429746 WASHC2CQ9Y4E1 1318 aa26.68■■□□□ 1.86
CTSD-203ENST00000429746 DMRT2Q9Y5R5 561 aa26.68■■□□□ 1.86
CTSD-203ENST00000429746 LMTK2Q8IWU2 1503 aa26.68■■□□□ 1.86
CTSD-203ENST00000429746 UNC13BO14795 1591 aa26.67■■□□□ 1.86
CTSD-203ENST00000429746 ZNF142P52746 1687 aaPredicted RBP26.66■■□□□ 1.86
CTSD-203ENST00000429746 ITGAEP38570 1179 aa26.64■■□□□ 1.86
CTSD-203ENST00000429746 FBXO31Q5XUX0 539 aaPredicted RBP26.64■■□□□ 1.86
CTSD-203ENST00000429746 SPATA31D1Q6ZQQ2 1576 aa26.63■■□□□ 1.85
CTSD-203ENST00000429746 FBXO41Q8TF61 875 aa26.63■■□□□ 1.85
CTSD-203ENST00000429746 ARHGAP31Q2M1Z3 1444 aa26.62■■□□□ 1.85
CTSD-203ENST00000429746 STRCQ7RTU9 1775 aa26.61■■□□□ 1.85
CTSD-203ENST00000429746 GCC2Q8IWJ2 1684 aa26.6■■□□□ 1.85
CTSD-203ENST00000429746 CEP170BQ9Y4F5 1589 aaPredicted RBP26.59■■□□□ 1.85
CTSD-203ENST00000429746 NAIPQ13075 1403 aa26.59■■□□□ 1.85
CTSD-203ENST00000429746 ERVK-7P63135 1459 aa26.59■■□□□ 1.85
CTSD-203ENST00000429746 EFCAB6Q5THR3 1501 aa26.58■■□□□ 1.85
CTSD-203ENST00000429746 CFAP65Q6ZU64 1925 aaKnown RBP26.55■■□□□ 1.84
CTSD-203ENST00000429746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.55■■□□□ 1.84
CTSD-203ENST00000429746 TNRQ92752 1358 aa26.55■■□□□ 1.84
CTSD-203ENST00000429746 IQGAP3Q86VI3 1631 aa26.54■■□□□ 1.84
CTSD-203ENST00000429746 HFM1A2PYH4 1435 aa26.53■■□□□ 1.84
CTSD-203ENST00000429746 PTPRTO14522 1441 aa26.53■■□□□ 1.84
CTSD-203ENST00000429746 TET3O43151 1660 aa26.53■■□□□ 1.84
CTSD-203ENST00000429746 A2ML1A8K2U0 1454 aa26.52■■□□□ 1.84
CTSD-203ENST00000429746 KANK1Q14678 1352 aa26.51■■□□□ 1.83
CTSD-203ENST00000429746 SYNMO15061 1565 aa26.49■■□□□ 1.83
CTSD-203ENST00000429746 NLRP1Q9C000 1473 aa26.48■■□□□ 1.83
CTSD-203ENST00000429746 CERKQ8TCT0 537 aa26.47■■□□□ 1.83
CTSD-203ENST00000429746 E9PCH4 1651 aa26.47■■□□□ 1.83
CTSD-203ENST00000429746 NOS1P29475 1434 aa26.47■■□□□ 1.83
CTSD-203ENST00000429746 PLA2R1Q13018 1463 aa26.43■■□□□ 1.82
CTSD-203ENST00000429746 RPRD2Q5VT52 1461 aaKnown RBP26.43■■□□□ 1.82
CTSD-203ENST00000429746 UBR1Q8IWV7 1749 aa26.42■■□□□ 1.82
CTSD-203ENST00000429746 PKD2Q13563 968 aa26.41■■□□□ 1.82
CTSD-203ENST00000429746 UGGT1Q9NYU2 1555 aa26.39■■□□□ 1.82
CTSD-203ENST00000429746 NUP155O75694 1391 aa26.39■■□□□ 1.82
CTSD-203ENST00000429746 PIK3C2BO00750 1634 aa26.39■■□□□ 1.81
CTSD-203ENST00000429746 NEURL4Q96JN8 1562 aa26.37■■□□□ 1.81
CTSD-203ENST00000429746 KDM5AP29375 1690 aaKnown RBP26.34■■□□□ 1.81
CTSD-203ENST00000429746 POLR1AO95602 1720 aaPredicted RBP26.34■■□□□ 1.81
CTSD-203ENST00000429746 ARHGAP23Q9P227 1491 aa26.3■■□□□ 1.8
CTSD-203ENST00000429746 NCKAP5LQ9HCH0 1330 aa26.3■■□□□ 1.8
CTSD-203ENST00000429746 IDI1Q13907 227 aa26.29■■□□□ 1.8
CTSD-203ENST00000429746 SLIT1O75093 1534 aa26.28■■□□□ 1.8
CTSD-203ENST00000429746 IQSEC2Q5JU85 1478 aa26.27■■□□□ 1.8
CTSD-203ENST00000429746 ADGRB3O60242 1522 aa26.27■■□□□ 1.8
CTSD-203ENST00000429746 LTBP4Q8N2S1 1624 aa26.27■■□□□ 1.8
CTSD-203ENST00000429746 SPHKAPQ2M3C7 1700 aa26.26■■□□□ 1.79
CTSD-203ENST00000429746 THEMISQ8N1K5 641 aaPredicted RBP26.26■■□□□ 1.79
CTSD-203ENST00000429746 MYO5BQ9ULV0 1848 aa26.25■■□□□ 1.79
CTSD-203ENST00000429746 MED14O60244 1454 aa26.24■■□□□ 1.79
CTSD-203ENST00000429746 TMEM131LA2VDJ0 1609 aa26.24■■□□□ 1.79
CTSD-203ENST00000429746 SETD5Q9C0A6 1442 aa26.22■■□□□ 1.79
CTSD-203ENST00000429746 ANKLE2Q86XL3 938 aa26.2■■□□□ 1.78
CTSD-203ENST00000429746 SLC52A1Q9NWF4 448 aa26.2■■□□□ 1.78
CTSD-203ENST00000429746 TRPM2O94759 1503 aa26.18■■□□□ 1.78
CTSD-203ENST00000429746 TMEM2Q9UHN6 1383 aa26.18■■□□□ 1.78
CTSD-203ENST00000429746 LTKP29376 864 aa26.16■■□□□ 1.78
CTSD-203ENST00000429746 CLTCL1P53675 1640 aa26.16■■□□□ 1.78
CTSD-203ENST00000429746 RAB3GAP2Q9H2M9 1393 aa26.16■■□□□ 1.78
CTSD-203ENST00000429746 IQGAP1P46940 1657 aa26.15■■□□□ 1.78
CTSD-203ENST00000429746 SCAF11Q99590 1463 aaKnown RBP26.15■■□□□ 1.78
CTSD-203ENST00000429746 ZFYVE9O95405 1425 aa26.14■■□□□ 1.78
CTSD-203ENST00000429746 NPHP4O75161 1426 aaPredicted RBP26.14■■□□□ 1.77
CTSD-203ENST00000429746 ZNF335Q9H4Z2 1342 aaPredicted RBP26.14■■□□□ 1.77
CTSD-203ENST00000429746 TRIM52Q96A61 297 aa26.13■■□□□ 1.77
CTSD-203ENST00000429746 SLC4A1APQ9BWU0 796 aaKnown RBP26.08■■□□□ 1.77
CTSD-203ENST00000429746 STRCP1A6NGW2 1772 aa26.06■■□□□ 1.76
CTSD-203ENST00000429746 MPHOSPH9Q99550 1183 aa26.05■■□□□ 1.76
CTSD-203ENST00000429746 FOXD1Q16676 465 aa26.04■■□□□ 1.76
CTSD-203ENST00000429746 TXNDC2Q86VQ3 553 aa26.04■■□□□ 1.76
CTSD-203ENST00000429746 CPS1P31327 1500 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms