RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 FER1L4A9Z1Z3 1794 aa17.64■□□□□ 0.41
PABPC1P11-201ENST00000428966 ANKRD30AQ9BXX3 1397 aa17.64■□□□□ 0.41
PABPC1P11-201ENST00000428966 ITGAEP38570 1179 aa17.63■□□□□ 0.41
PABPC1P11-201ENST00000428966 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
PABPC1P11-201ENST00000428966 DUOX2Q9NRD8 1548 aa17.62■□□□□ 0.41
PABPC1P11-201ENST00000428966 CEBPAP49715 358 aaPredicted RBP17.62■□□□□ 0.41
PABPC1P11-201ENST00000428966 ESF1Q9H501 851 aaKnown RBP17.6■□□□□ 0.41
PABPC1P11-201ENST00000428966 ERBINQ96RT1 1412 aa17.59■□□□□ 0.41
PABPC1P11-201ENST00000428966 CNTLNQ9NXG0 1405 aa17.58■□□□□ 0.41
PABPC1P11-201ENST00000428966 EIF2AK4Q9P2K8 1649 aaKnown RBP17.56■□□□□ 0.4
PABPC1P11-201ENST00000428966 ROCK1Q13464 1354 aa17.56■□□□□ 0.4
PABPC1P11-201ENST00000428966 ZMYM3Q14202 1370 aa17.56■□□□□ 0.4
PABPC1P11-201ENST00000428966 PIAS4Q8N2W9 510 aaPredicted RBP17.56■□□□□ 0.4
PABPC1P11-201ENST00000428966 RNF17Q9BXT8 1623 aaKnown RBP17.55■□□□□ 0.4
PABPC1P11-201ENST00000428966 ANKRD50Q9ULJ7 1429 aa17.54■□□□□ 0.4
PABPC1P11-201ENST00000428966 MROH1Q8NDA8 1641 aa17.54■□□□□ 0.4
PABPC1P11-201ENST00000428966 WASHC2CQ9Y4E1 1318 aa17.54■□□□□ 0.4
PABPC1P11-201ENST00000428966 CLTCQ00610 1675 aaKnown RBP17.53■□□□□ 0.4
PABPC1P11-201ENST00000428966 KDM5DQ9BY66 1539 aa17.52■□□□□ 0.4
PABPC1P11-201ENST00000428966 C3P01024 1663 aa17.52■□□□□ 0.4
PABPC1P11-201ENST00000428966 MROH2AA6NES4 1674 aa17.51■□□□□ 0.39
PABPC1P11-201ENST00000428966 PRDM15P57071 1507 aaPredicted RBP17.5■□□□□ 0.39
PABPC1P11-201ENST00000428966 FAM135AQ9P2D6 1515 aa17.5■□□□□ 0.39
PABPC1P11-201ENST00000428966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.39
PABPC1P11-201ENST00000428966 ABCC3O15438 1527 aa17.49■□□□□ 0.39
PABPC1P11-201ENST00000428966 LMTK3Q96Q04 1460 aa17.49■□□□□ 0.39
PABPC1P11-201ENST00000428966 ZEB1P37275 1124 aaPredicted RBP17.48■□□□□ 0.39
PABPC1P11-201ENST00000428966 DEPDC5O75140 1603 aa17.48■□□□□ 0.39
PABPC1P11-201ENST00000428966 KCNA4P22459 653 aa17.47■□□□□ 0.39
PABPC1P11-201ENST00000428966 FBXO31Q5XUX0 539 aaPredicted RBP17.46■□□□□ 0.39
PABPC1P11-201ENST00000428966 NPATQ14207 1427 aa17.46■□□□□ 0.39
PABPC1P11-201ENST00000428966 PZPP20742 1482 aa17.45■□□□□ 0.38
PABPC1P11-201ENST00000428966 NAIPQ13075 1403 aa17.45■□□□□ 0.38
PABPC1P11-201ENST00000428966 VWDEQ8N2E2 1590 aa17.44■□□□□ 0.38
PABPC1P11-201ENST00000428966 ZC3H13Q5T200 1668 aaKnown RBP17.43■□□□□ 0.38
PABPC1P11-201ENST00000428966 KANK1Q14678 1352 aa17.43■□□□□ 0.38
PABPC1P11-201ENST00000428966 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
PABPC1P11-201ENST00000428966 HSPA2P54652 639 aa17.42■□□□□ 0.38
PABPC1P11-201ENST00000428966 CEP152O94986 1710 aa17.41■□□□□ 0.38
PABPC1P11-201ENST00000428966 UHRF1BP1Q6BDS2 1440 aa17.41■□□□□ 0.38
PABPC1P11-201ENST00000428966 LMTK2Q8IWU2 1503 aa17.4■□□□□ 0.38
PABPC1P11-201ENST00000428966 PREX1Q8TCU6 1659 aa17.4■□□□□ 0.38
PABPC1P11-201ENST00000428966 CAMSAP1Q5T5Y3 1602 aa17.39■□□□□ 0.38
PABPC1P11-201ENST00000428966 UNC13BO14795 1591 aa17.39■□□□□ 0.37
PABPC1P11-201ENST00000428966 ARHGAP31Q2M1Z3 1444 aa17.39■□□□□ 0.37
PABPC1P11-201ENST00000428966 SETD1BQ9UPS6 1966 aaKnown RBP17.38■□□□□ 0.37
PABPC1P11-201ENST00000428966 TNRQ92752 1358 aa17.38■□□□□ 0.37
PABPC1P11-201ENST00000428966 NUP155O75694 1391 aa17.37■□□□□ 0.37
PABPC1P11-201ENST00000428966 ERVK-7P63135 1459 aa17.36■□□□□ 0.37
PABPC1P11-201ENST00000428966 GCC2Q8IWJ2 1684 aa17.36■□□□□ 0.37
PABPC1P11-201ENST00000428966 EFCAB6Q5THR3 1501 aa17.35■□□□□ 0.37
PABPC1P11-201ENST00000428966 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
PABPC1P11-201ENST00000428966 MYO3AQ8NEV4 1616 aa17.34■□□□□ 0.37
PABPC1P11-201ENST00000428966 CEP170BQ9Y4F5 1589 aaPredicted RBP17.32■□□□□ 0.36
PABPC1P11-201ENST00000428966 IQGAP3Q86VI3 1631 aa17.32■□□□□ 0.36
PABPC1P11-201ENST00000428966 A2ML1A8K2U0 1454 aa17.3■□□□□ 0.36
PABPC1P11-201ENST00000428966 TET3O43151 1660 aa17.3■□□□□ 0.36
PABPC1P11-201ENST00000428966 NLRP1Q9C000 1473 aa17.3■□□□□ 0.36
PABPC1P11-201ENST00000428966 ZNF142P52746 1687 aaPredicted RBP17.29■□□□□ 0.36
PABPC1P11-201ENST00000428966 RPRD2Q5VT52 1461 aaKnown RBP17.29■□□□□ 0.36
PABPC1P11-201ENST00000428966 NOS1P29475 1434 aa17.29■□□□□ 0.36
PABPC1P11-201ENST00000428966 CFAP65Q6ZU64 1925 aaKnown RBP17.27■□□□□ 0.36
PABPC1P11-201ENST00000428966 TRIM52Q96A61 297 aa17.27■□□□□ 0.36
PABPC1P11-201ENST00000428966 SETD5Q9C0A6 1442 aa17.26■□□□□ 0.35
PABPC1P11-201ENST00000428966 SYNMO15061 1565 aa17.26■□□□□ 0.35
PABPC1P11-201ENST00000428966 E9PCH4 1651 aa17.25■□□□□ 0.35
PABPC1P11-201ENST00000428966 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
PABPC1P11-201ENST00000428966 UGGT1Q9NYU2 1555 aa17.25■□□□□ 0.35
PABPC1P11-201ENST00000428966 IDI1Q13907 227 aa17.25■□□□□ 0.35
PABPC1P11-201ENST00000428966 RAB3GAP2Q9H2M9 1393 aa17.23■□□□□ 0.35
PABPC1P11-201ENST00000428966 STRCQ7RTU9 1775 aa17.22■□□□□ 0.35
PABPC1P11-201ENST00000428966 THEMISQ8N1K5 641 aaPredicted RBP17.22■□□□□ 0.35
PABPC1P11-201ENST00000428966 PLA2R1Q13018 1463 aa17.22■□□□□ 0.35
PABPC1P11-201ENST00000428966 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
PABPC1P11-201ENST00000428966 SLC52A1Q9NWF4 448 aa17.21■□□□□ 0.35
PABPC1P11-201ENST00000428966 NCKAP5LQ9HCH0 1330 aa17.21■□□□□ 0.35
PABPC1P11-201ENST00000428966 PKD2Q13563 968 aa17.2■□□□□ 0.34
PABPC1P11-201ENST00000428966 PIK3C2BO00750 1634 aa17.19■□□□□ 0.34
PABPC1P11-201ENST00000428966 UBR1Q8IWV7 1749 aa17.18■□□□□ 0.34
PABPC1P11-201ENST00000428966 PTPRTO14522 1441 aa17.18■□□□□ 0.34
PABPC1P11-201ENST00000428966 MPHOSPH9Q99550 1183 aa17.16■□□□□ 0.34
PABPC1P11-201ENST00000428966 STAG3Q9UJ98 1225 aa17.16■□□□□ 0.34
PABPC1P11-201ENST00000428966 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
PABPC1P11-201ENST00000428966 ANKLE2Q86XL3 938 aa17.14■□□□□ 0.34
PABPC1P11-201ENST00000428966 TMEM2Q9UHN6 1383 aa17.14■□□□□ 0.33
PABPC1P11-201ENST00000428966 ADGRB3O60242 1522 aa17.13■□□□□ 0.33
PABPC1P11-201ENST00000428966 ARHGAP23Q9P227 1491 aa17.13■□□□□ 0.33
PABPC1P11-201ENST00000428966 LTKP29376 864 aa17.13■□□□□ 0.33
PABPC1P11-201ENST00000428966 NEURL4Q96JN8 1562 aa17.13■□□□□ 0.33
PABPC1P11-201ENST00000428966 SLIT1O75093 1534 aa17.12■□□□□ 0.33
PABPC1P11-201ENST00000428966 ACIN1Q9UKV3 1341 aaKnown RBP17.12■□□□□ 0.33
PABPC1P11-201ENST00000428966 SPHKAPQ2M3C7 1700 aa17.12■□□□□ 0.33
PABPC1P11-201ENST00000428966 TRPM2O94759 1503 aa17.11■□□□□ 0.33
PABPC1P11-201ENST00000428966 KDM5AP29375 1690 aaKnown RBP17.11■□□□□ 0.33
PABPC1P11-201ENST00000428966 CHGAP10645 457 aaKnown RBP17.1■□□□□ 0.33
PABPC1P11-201ENST00000428966 TMEM131LA2VDJ0 1609 aa17.1■□□□□ 0.33
PABPC1P11-201ENST00000428966 TXNDC2Q86VQ3 553 aa17.09■□□□□ 0.33
PABPC1P11-201ENST00000428966 MED14O60244 1454 aa17.09■□□□□ 0.33
PABPC1P11-201ENST00000428966 SCAF11Q99590 1463 aaKnown RBP17.09■□□□□ 0.33
PABPC1P11-201ENST00000428966 CLTCL1P53675 1640 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms