RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 EHBP1L1Q8N3D4 1523 aa17.3■□□□□ 0.36
APOBEC3C-202ENST00000428892 TCOF1Q13428 1488 aaKnown RBP17.29■□□□□ 0.36
APOBEC3C-202ENST00000428892 DNMT1P26358 1616 aaKnown RBP17.28■□□□□ 0.36
APOBEC3C-202ENST00000428892 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
APOBEC3C-202ENST00000428892 A2ML1A8K2U0 1454 aa17.26■□□□□ 0.35
APOBEC3C-202ENST00000428892 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
APOBEC3C-202ENST00000428892 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
APOBEC3C-202ENST00000428892 KDM5DQ9BY66 1539 aa17.23■□□□□ 0.35
APOBEC3C-202ENST00000428892 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
APOBEC3C-202ENST00000428892 RTEL1-TNFRSF6BF6WH68 1400 aa17.21■□□□□ 0.35
APOBEC3C-202ENST00000428892 CPS1P31327 1500 aa17.21■□□□□ 0.34
APOBEC3C-202ENST00000428892 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.34
APOBEC3C-202ENST00000428892 ZNF644Q9H582 1327 aaPredicted RBP17.21■□□□□ 0.34
APOBEC3C-202ENST00000428892 CCDC141Q6ZP82 1450 aa17.19■□□□□ 0.34
APOBEC3C-202ENST00000428892 TNRQ92752 1358 aa17.19■□□□□ 0.34
APOBEC3C-202ENST00000428892 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
APOBEC3C-202ENST00000428892 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
APOBEC3C-202ENST00000428892 DHX29Q7Z478 1369 aaKnown RBP17.18■□□□□ 0.34
APOBEC3C-202ENST00000428892 KIF3BO15066 747 aa17.18■□□□□ 0.34
APOBEC3C-202ENST00000428892 PIP4K2BP78356 416 aa17.18■□□□□ 0.34
APOBEC3C-202ENST00000428892 PZPP20742 1482 aa17.18■□□□□ 0.34
APOBEC3C-202ENST00000428892 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
APOBEC3C-202ENST00000428892 MED1Q15648 1581 aaPredicted RBP17.16■□□□□ 0.34
APOBEC3C-202ENST00000428892 TOM1O60784 492 aa17.16■□□□□ 0.34
APOBEC3C-202ENST00000428892 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
APOBEC3C-202ENST00000428892 MAP3K1Q13233 1512 aa17.16■□□□□ 0.34
APOBEC3C-202ENST00000428892 SHANK2Q9UPX8 1470 aa17.15■□□□□ 0.34
APOBEC3C-202ENST00000428892 UGGT1Q9NYU2 1555 aa17.15■□□□□ 0.34
APOBEC3C-202ENST00000428892 IQGAP1P46940 1657 aa17.14■□□□□ 0.33
APOBEC3C-202ENST00000428892 ZC3H13Q5T200 1668 aaKnown RBP17.14■□□□□ 0.33
APOBEC3C-202ENST00000428892 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
APOBEC3C-202ENST00000428892 FBXO31Q5XUX0 539 aaPredicted RBP17.13■□□□□ 0.33
APOBEC3C-202ENST00000428892 DEPDC5O75140 1603 aa17.13■□□□□ 0.33
APOBEC3C-202ENST00000428892 NLRP1Q9C000 1473 aa17.12■□□□□ 0.33
APOBEC3C-202ENST00000428892 CFAP65Q6ZU64 1925 aaKnown RBP17.12■□□□□ 0.33
APOBEC3C-202ENST00000428892 ANKLE2Q86XL3 938 aa17.12■□□□□ 0.33
APOBEC3C-202ENST00000428892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.12■□□□□ 0.33
APOBEC3C-202ENST00000428892 ARHGEF5Q12774 1597 aa17.11■□□□□ 0.33
APOBEC3C-202ENST00000428892 HSPA1LP34931 641 aa17.11■□□□□ 0.33
APOBEC3C-202ENST00000428892 RSPH4AQ5TD94 716 aa17.11■□□□□ 0.33
APOBEC3C-202ENST00000428892 THEMISQ8N1K5 641 aaPredicted RBP17.11■□□□□ 0.33
APOBEC3C-202ENST00000428892 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
APOBEC3C-202ENST00000428892 VWDEQ8N2E2 1590 aa17.1■□□□□ 0.33
APOBEC3C-202ENST00000428892 TSPY4P0CV99 314 aa17.09■□□□□ 0.33
APOBEC3C-202ENST00000428892 TSPY10P0CW01 314 aa17.09■□□□□ 0.33
APOBEC3C-202ENST00000428892 NPHP4O75161 1426 aaPredicted RBP17.09■□□□□ 0.33
APOBEC3C-202ENST00000428892 CEP152O94986 1710 aa17.08■□□□□ 0.32
APOBEC3C-202ENST00000428892 RNF17Q9BXT8 1623 aaKnown RBP17.08■□□□□ 0.32
APOBEC3C-202ENST00000428892 SYNMO15061 1565 aa17.08■□□□□ 0.32
APOBEC3C-202ENST00000428892 MIA2Q96PC5 1412 aa17.08■□□□□ 0.32
APOBEC3C-202ENST00000428892 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
APOBEC3C-202ENST00000428892 MED14O60244 1454 aa17.05■□□□□ 0.32
APOBEC3C-202ENST00000428892 STRCP1A6NGW2 1772 aa17.05■□□□□ 0.32
APOBEC3C-202ENST00000428892 MAST1Q9Y2H9 1570 aa17.03■□□□□ 0.32
APOBEC3C-202ENST00000428892 ABCC3O15438 1527 aa17.03■□□□□ 0.32
APOBEC3C-202ENST00000428892 UBR1Q8IWV7 1749 aa17.03■□□□□ 0.32
APOBEC3C-202ENST00000428892 KANK4Q5T7N3 995 aaPredicted RBP17.01■□□□□ 0.31
APOBEC3C-202ENST00000428892 ERVK-7P63135 1459 aa16.99■□□□□ 0.31
APOBEC3C-202ENST00000428892 LRRC7Q96NW7 1537 aa16.98■□□□□ 0.31
APOBEC3C-202ENST00000428892 ALKQ9UM73 1620 aa16.98■□□□□ 0.31
APOBEC3C-202ENST00000428892 MROH1Q8NDA8 1641 aa16.96■□□□□ 0.31
APOBEC3C-202ENST00000428892 CROCC2H7BZ55 1655 aa16.96■□□□□ 0.31
APOBEC3C-202ENST00000428892 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.3
APOBEC3C-202ENST00000428892 SCAF11Q99590 1463 aaKnown RBP16.95■□□□□ 0.3
APOBEC3C-202ENST00000428892 XIRP1Q702N8 1843 aaKnown RBP16.93■□□□□ 0.3
APOBEC3C-202ENST00000428892 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
APOBEC3C-202ENST00000428892 MYOM3Q5VTT5 1437 aa16.92■□□□□ 0.3
APOBEC3C-202ENST00000428892 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
APOBEC3C-202ENST00000428892 PIK3C2BO00750 1634 aa16.91■□□□□ 0.3
APOBEC3C-202ENST00000428892 EID1Q9Y6B2 187 aa16.9■□□□□ 0.3
APOBEC3C-202ENST00000428892 APLP2Q06481 763 aa16.89■□□□□ 0.29
APOBEC3C-202ENST00000428892 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.29
APOBEC3C-202ENST00000428892 SLIT1O75093 1534 aa16.89■□□□□ 0.29
APOBEC3C-202ENST00000428892 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
APOBEC3C-202ENST00000428892 ERBINQ96RT1 1412 aa16.87■□□□□ 0.29
APOBEC3C-202ENST00000428892 KIF15Q9NS87 1388 aa16.87■□□□□ 0.29
APOBEC3C-202ENST00000428892 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
APOBEC3C-202ENST00000428892 KDM5AP29375 1690 aaKnown RBP16.86■□□□□ 0.29
APOBEC3C-202ENST00000428892 KANK1Q14678 1352 aa16.86■□□□□ 0.29
APOBEC3C-202ENST00000428892 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
APOBEC3C-202ENST00000428892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
APOBEC3C-202ENST00000428892 ARHGAP31Q2M1Z3 1444 aa16.85■□□□□ 0.29
APOBEC3C-202ENST00000428892 EFCAB6Q5THR3 1501 aa16.83■□□□□ 0.28
APOBEC3C-202ENST00000428892 ROBO1Q9Y6N7 1651 aa16.82■□□□□ 0.28
APOBEC3C-202ENST00000428892 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
APOBEC3C-202ENST00000428892 LTKP29376 864 aa16.82■□□□□ 0.28
APOBEC3C-202ENST00000428892 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
APOBEC3C-202ENST00000428892 TMEM2Q9UHN6 1383 aa16.79■□□□□ 0.28
APOBEC3C-202ENST00000428892 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
APOBEC3C-202ENST00000428892 BCANQ96GW7 911 aa16.78■□□□□ 0.28
APOBEC3C-202ENST00000428892 ABCC5O15440 1437 aa16.78■□□□□ 0.28
APOBEC3C-202ENST00000428892 DAPK1P53355 1430 aa16.78■□□□□ 0.28
APOBEC3C-202ENST00000428892 ADGRB3O60242 1522 aa16.77■□□□□ 0.28
APOBEC3C-202ENST00000428892 PHLPP1O60346 1717 aa16.77■□□□□ 0.28
APOBEC3C-202ENST00000428892 MYO5BQ9ULV0 1848 aa16.77■□□□□ 0.27
APOBEC3C-202ENST00000428892 TMEM94Q12767 1356 aa16.77■□□□□ 0.27
APOBEC3C-202ENST00000428892 FAM135BQ49AJ0 1406 aa16.76■□□□□ 0.27
APOBEC3C-202ENST00000428892 ANKRD30AQ9BXX3 1397 aa16.75■□□□□ 0.27
APOBEC3C-202ENST00000428892 LMTK2Q8IWU2 1503 aa16.75■□□□□ 0.27
APOBEC3C-202ENST00000428892 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms