RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ANKRD50Q9ULJ7 1429 aa16.56■□□□□ 0.24
CECR3-201ENST00000428828 A2MP01023 1474 aa16.56■□□□□ 0.24
CECR3-201ENST00000428828 EIF2AK4Q9P2K8 1649 aaKnown RBP16.54■□□□□ 0.24
CECR3-201ENST00000428828 ATP10AO60312 1499 aa16.53■□□□□ 0.24
CECR3-201ENST00000428828 ERBINQ96RT1 1412 aa16.53■□□□□ 0.24
CECR3-201ENST00000428828 DHX29Q7Z478 1369 aaKnown RBP16.51■□□□□ 0.23
CECR3-201ENST00000428828 REREQ9P2R6 1566 aa16.5■□□□□ 0.23
CECR3-201ENST00000428828 BCORL1Q5H9F3 1711 aa16.49■□□□□ 0.23
CECR3-201ENST00000428828 UNC13BO14795 1591 aa16.49■□□□□ 0.23
CECR3-201ENST00000428828 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
CECR3-201ENST00000428828 DEPDC5O75140 1603 aa16.48■□□□□ 0.23
CECR3-201ENST00000428828 KIF3BO15066 747 aa16.47■□□□□ 0.23
CECR3-201ENST00000428828 RNF17Q9BXT8 1623 aaKnown RBP16.47■□□□□ 0.23
CECR3-201ENST00000428828 TRIM52Q96A61 297 aa16.47■□□□□ 0.23
CECR3-201ENST00000428828 CEP152O94986 1710 aa16.46■□□□□ 0.23
CECR3-201ENST00000428828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.23
CECR3-201ENST00000428828 MROH1Q8NDA8 1641 aa16.45■□□□□ 0.22
CECR3-201ENST00000428828 ARID4BQ4LE39 1312 aaPredicted RBP16.45■□□□□ 0.22
CECR3-201ENST00000428828 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
CECR3-201ENST00000428828 AGLP35573 1532 aa16.43■□□□□ 0.22
CECR3-201ENST00000428828 PRDM15P57071 1507 aaPredicted RBP16.43■□□□□ 0.22
CECR3-201ENST00000428828 MLECQ14165 292 aa16.43■□□□□ 0.22
CECR3-201ENST00000428828 GGT6Q6P531 493 aa16.43■□□□□ 0.22
CECR3-201ENST00000428828 IQGAP3Q86VI3 1631 aa16.42■□□□□ 0.22
CECR3-201ENST00000428828 NUP155O75694 1391 aa16.4■□□□□ 0.22
CECR3-201ENST00000428828 FAM135AQ9P2D6 1515 aa16.4■□□□□ 0.22
CECR3-201ENST00000428828 CLTCQ00610 1675 aaKnown RBP16.4■□□□□ 0.22
CECR3-201ENST00000428828 PRKCSHP14314 528 aaPredicted RBP16.39■□□□□ 0.21
CECR3-201ENST00000428828 KDM5DQ9BY66 1539 aa16.39■□□□□ 0.21
CECR3-201ENST00000428828 CFAP65Q6ZU64 1925 aaKnown RBP16.39■□□□□ 0.21
CECR3-201ENST00000428828 FER1L4A9Z1Z3 1794 aa16.39■□□□□ 0.21
CECR3-201ENST00000428828 ZC3H13Q5T200 1668 aaKnown RBP16.38■□□□□ 0.21
CECR3-201ENST00000428828 PZPP20742 1482 aa16.38■□□□□ 0.21
CECR3-201ENST00000428828 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
CECR3-201ENST00000428828 KANK1Q14678 1352 aa16.37■□□□□ 0.21
CECR3-201ENST00000428828 TET3O43151 1660 aa16.37■□□□□ 0.21
CECR3-201ENST00000428828 CAMSAP1Q5T5Y3 1602 aa16.36■□□□□ 0.21
CECR3-201ENST00000428828 VWDEQ8N2E2 1590 aa16.36■□□□□ 0.21
CECR3-201ENST00000428828 E9PCH4 1651 aa16.35■□□□□ 0.21
CECR3-201ENST00000428828 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
CECR3-201ENST00000428828 DHX57Q6P158 1386 aaKnown RBP16.34■□□□□ 0.21
CECR3-201ENST00000428828 ABCC3O15438 1527 aa16.34■□□□□ 0.21
CECR3-201ENST00000428828 WASHC2CQ9Y4E1 1318 aa16.33■□□□□ 0.2
CECR3-201ENST00000428828 MPHOSPH9Q99550 1183 aa16.33■□□□□ 0.2
CECR3-201ENST00000428828 MADDQ8WXG6 1647 aa16.32■□□□□ 0.2
CECR3-201ENST00000428828 RIMS1Q86UR5 1692 aaKnown RBP16.31■□□□□ 0.2
CECR3-201ENST00000428828 EFCAB6Q5THR3 1501 aa16.31■□□□□ 0.2
CECR3-201ENST00000428828 FOXD1Q16676 465 aa16.31■□□□□ 0.2
CECR3-201ENST00000428828 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
CECR3-201ENST00000428828 ESF1Q9H501 851 aaKnown RBP16.29■□□□□ 0.2
CECR3-201ENST00000428828 SPHKAPQ2M3C7 1700 aa16.29■□□□□ 0.2
CECR3-201ENST00000428828 LMTK2Q8IWU2 1503 aa16.29■□□□□ 0.2
CECR3-201ENST00000428828 PKD2Q13563 968 aa16.29■□□□□ 0.2
CECR3-201ENST00000428828 ADAMTSL3P82987 1691 aa16.28■□□□□ 0.2
CECR3-201ENST00000428828 MROH2AA6NES4 1674 aa16.28■□□□□ 0.2
CECR3-201ENST00000428828 SUPT16HQ9Y5B9 1047 aaKnown RBP16.27■□□□□ 0.19
CECR3-201ENST00000428828 C3P01024 1663 aa16.26■□□□□ 0.19
CECR3-201ENST00000428828 PREX1Q8TCU6 1659 aa16.25■□□□□ 0.19
CECR3-201ENST00000428828 PLPPR3Q6T4P5 718 aa16.25■□□□□ 0.19
CECR3-201ENST00000428828 NPATQ14207 1427 aa16.24■□□□□ 0.19
CECR3-201ENST00000428828 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
CECR3-201ENST00000428828 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
CECR3-201ENST00000428828 MIER1Q8N108 512 aa16.21■□□□□ 0.19
CECR3-201ENST00000428828 CNTLNQ9NXG0 1405 aa16.21■□□□□ 0.19
CECR3-201ENST00000428828 RPRD2Q5VT52 1461 aaKnown RBP16.2■□□□□ 0.18
CECR3-201ENST00000428828 ZMYM3Q14202 1370 aa16.2■□□□□ 0.18
CECR3-201ENST00000428828 UGGT1Q9NYU2 1555 aa16.19■□□□□ 0.18
CECR3-201ENST00000428828 ARHGAP31Q2M1Z3 1444 aa16.18■□□□□ 0.18
CECR3-201ENST00000428828 CLTCL1P53675 1640 aa16.18■□□□□ 0.18
CECR3-201ENST00000428828 SYNMO15061 1565 aa16.18■□□□□ 0.18
CECR3-201ENST00000428828 TRPM2O94759 1503 aa16.18■□□□□ 0.18
CECR3-201ENST00000428828 CEBPAP49715 358 aaPredicted RBP16.17■□□□□ 0.18
CECR3-201ENST00000428828 ANKRD30BQ9BXX2 1392 aa16.17■□□□□ 0.18
CECR3-201ENST00000428828 KIF1BO60333 1816 aa16.17■□□□□ 0.18
CECR3-201ENST00000428828 FBXO31Q5XUX0 539 aaPredicted RBP16.17■□□□□ 0.18
CECR3-201ENST00000428828 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
CECR3-201ENST00000428828 ERVK-7P63135 1459 aa16.16■□□□□ 0.18
CECR3-201ENST00000428828 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
CECR3-201ENST00000428828 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
CECR3-201ENST00000428828 SPATA31D1Q6ZQQ2 1576 aa16.15■□□□□ 0.18
CECR3-201ENST00000428828 CCDC144AA2RUR9 1427 aa16.14■□□□□ 0.17
CECR3-201ENST00000428828 PTPRTO14522 1441 aa16.14■□□□□ 0.17
CECR3-201ENST00000428828 NOS1P29475 1434 aa16.13■□□□□ 0.17
CECR3-201ENST00000428828 PIK3C2BO00750 1634 aa16.13■□□□□ 0.17
CECR3-201ENST00000428828 PTPRMP28827 1452 aa16.12■□□□□ 0.17
CECR3-201ENST00000428828 MYO3AQ8NEV4 1616 aa16.1■□□□□ 0.17
CECR3-201ENST00000428828 KDM4FA0A1W2PPD8 638 aa16.09■□□□□ 0.17
CECR3-201ENST00000428828 TNRQ92752 1358 aa16.09■□□□□ 0.17
CECR3-201ENST00000428828 CHGAP10645 457 aaKnown RBP16.07■□□□□ 0.16
CECR3-201ENST00000428828 SETD1BQ9UPS6 1966 aaKnown RBP16.06■□□□□ 0.16
CECR3-201ENST00000428828 TMEM131LA2VDJ0 1609 aa16.05■□□□□ 0.16
CECR3-201ENST00000428828 UBR1Q8IWV7 1749 aa16.05■□□□□ 0.16
CECR3-201ENST00000428828 ADGRB3O60242 1522 aa16.04■□□□□ 0.16
CECR3-201ENST00000428828 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
CECR3-201ENST00000428828 IDI1Q13907 227 aa16.04■□□□□ 0.16
CECR3-201ENST00000428828 RGL3Q3MIN7 710 aa16.04■□□□□ 0.16
CECR3-201ENST00000428828 IFT172Q9UG01 1749 aa16.02■□□□□ 0.16
CECR3-201ENST00000428828 ZNF142P52746 1687 aaPredicted RBP16.02■□□□□ 0.16
CECR3-201ENST00000428828 SLC52A1Q9NWF4 448 aa16.02■□□□□ 0.16
CECR3-201ENST00000428828 CEP170BQ9Y4F5 1589 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms