RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 CNTLNQ9NXG0 1405 aa27.25■■□□□ 1.95
MMP11-202ENST00000428253 ITGAEP38570 1179 aa27.25■■□□□ 1.95
MMP11-202ENST00000428253 MROH1Q8NDA8 1641 aa27.24■■□□□ 1.95
MMP11-202ENST00000428253 FAM135AQ9P2D6 1515 aa27.23■■□□□ 1.95
MMP11-202ENST00000428253 MROH2AA6NES4 1674 aa27.21■■□□□ 1.95
MMP11-202ENST00000428253 ANKRD50Q9ULJ7 1429 aa27.21■■□□□ 1.95
MMP11-202ENST00000428253 DEPDC5O75140 1603 aa27.2■■□□□ 1.95
MMP11-202ENST00000428253 CLTCQ00610 1675 aaKnown RBP27.19■■□□□ 1.94
MMP11-202ENST00000428253 KDM5DQ9BY66 1539 aa27.18■■□□□ 1.94
MMP11-202ENST00000428253 C3P01024 1663 aa27.17■■□□□ 1.94
MMP11-202ENST00000428253 PRDM15P57071 1507 aaPredicted RBP27.17■■□□□ 1.94
MMP11-202ENST00000428253 ESF1Q9H501 851 aaKnown RBP27.17■■□□□ 1.94
MMP11-202ENST00000428253 CEBPAP49715 358 aaPredicted RBP27.16■■□□□ 1.94
MMP11-202ENST00000428253 ZMYM3Q14202 1370 aa27.16■■□□□ 1.94
MMP11-202ENST00000428253 ABCC3O15438 1527 aa27.13■■□□□ 1.93
MMP11-202ENST00000428253 VWDEQ8N2E2 1590 aa27.12■■□□□ 1.93
MMP11-202ENST00000428253 WASHC2CQ9Y4E1 1318 aa27.12■■□□□ 1.93
MMP11-202ENST00000428253 ZC3H13Q5T200 1668 aaKnown RBP27.11■■□□□ 1.93
MMP11-202ENST00000428253 NAIPQ13075 1403 aa27.11■■□□□ 1.93
MMP11-202ENST00000428253 HFM1A2PYH4 1435 aa27.08■■□□□ 1.93
MMP11-202ENST00000428253 GCC2Q8IWJ2 1684 aa27.07■■□□□ 1.92
MMP11-202ENST00000428253 NPATQ14207 1427 aa27.07■■□□□ 1.92
MMP11-202ENST00000428253 UNC13BO14795 1591 aa27.06■■□□□ 1.92
MMP11-202ENST00000428253 SETD1BQ9UPS6 1966 aaKnown RBP27.06■■□□□ 1.92
MMP11-202ENST00000428253 CEP152O94986 1710 aa27.06■■□□□ 1.92
MMP11-202ENST00000428253 LMTK2Q8IWU2 1503 aa27.06■■□□□ 1.92
MMP11-202ENST00000428253 PLPPR3Q6T4P5 718 aa27.05■■□□□ 1.92
MMP11-202ENST00000428253 PZPP20742 1482 aa27.05■■□□□ 1.92
MMP11-202ENST00000428253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.03■■□□□ 1.92
MMP11-202ENST00000428253 CAMSAP1Q5T5Y3 1602 aa27.02■■□□□ 1.92
MMP11-202ENST00000428253 KANK1Q14678 1352 aa27.02■■□□□ 1.92
MMP11-202ENST00000428253 ARHGAP31Q2M1Z3 1444 aa27■■□□□ 1.91
MMP11-202ENST00000428253 LMTK3Q96Q04 1460 aa26.99■■□□□ 1.91
MMP11-202ENST00000428253 FBXO31Q5XUX0 539 aaPredicted RBP26.97■■□□□ 1.91
MMP11-202ENST00000428253 PREX1Q8TCU6 1659 aa26.97■■□□□ 1.91
MMP11-202ENST00000428253 IQGAP3Q86VI3 1631 aa26.95■■□□□ 1.91
MMP11-202ENST00000428253 SPATA31D1Q6ZQQ2 1576 aa26.93■■□□□ 1.9
MMP11-202ENST00000428253 EFCAB6Q5THR3 1501 aa26.93■■□□□ 1.9
MMP11-202ENST00000428253 NUP155O75694 1391 aa26.92■■□□□ 1.9
MMP11-202ENST00000428253 TET3O43151 1660 aa26.92■■□□□ 1.9
MMP11-202ENST00000428253 ERVK-7P63135 1459 aa26.91■■□□□ 1.9
MMP11-202ENST00000428253 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
MMP11-202ENST00000428253 TNRQ92752 1358 aa26.89■■□□□ 1.9
MMP11-202ENST00000428253 MYO3AQ8NEV4 1616 aa26.87■■□□□ 1.89
MMP11-202ENST00000428253 CFAP65Q6ZU64 1925 aaKnown RBP26.87■■□□□ 1.89
MMP11-202ENST00000428253 RPRD2Q5VT52 1461 aaKnown RBP26.87■■□□□ 1.89
MMP11-202ENST00000428253 SETD5Q9C0A6 1442 aa26.86■■□□□ 1.89
MMP11-202ENST00000428253 ZNF142P52746 1687 aaPredicted RBP26.85■■□□□ 1.89
MMP11-202ENST00000428253 NOS1P29475 1434 aa26.84■■□□□ 1.89
MMP11-202ENST00000428253 E9PCH4 1651 aa26.82■■□□□ 1.88
MMP11-202ENST00000428253 CEP170BQ9Y4F5 1589 aaPredicted RBP26.81■■□□□ 1.88
MMP11-202ENST00000428253 A2ML1A8K2U0 1454 aa26.81■■□□□ 1.88
MMP11-202ENST00000428253 NLRP1Q9C000 1473 aa26.81■■□□□ 1.88
MMP11-202ENST00000428253 HSPA2P54652 639 aa26.8■■□□□ 1.88
MMP11-202ENST00000428253 SYNMO15061 1565 aa26.78■■□□□ 1.88
MMP11-202ENST00000428253 RAB3GAP2Q9H2M9 1393 aa26.77■■□□□ 1.88
MMP11-202ENST00000428253 TRIM52Q96A61 297 aa26.75■■□□□ 1.87
MMP11-202ENST00000428253 ACIN1Q9UKV3 1341 aaKnown RBP26.74■■□□□ 1.87
MMP11-202ENST00000428253 HRCP23327 699 aa26.73■■□□□ 1.87
MMP11-202ENST00000428253 PTPRTO14522 1441 aa26.7■■□□□ 1.86
MMP11-202ENST00000428253 IDI1Q13907 227 aa26.69■■□□□ 1.86
MMP11-202ENST00000428253 UGGT1Q9NYU2 1555 aa26.69■■□□□ 1.86
MMP11-202ENST00000428253 STRCQ7RTU9 1775 aa26.69■■□□□ 1.86
MMP11-202ENST00000428253 PIK3C2BO00750 1634 aa26.68■■□□□ 1.86
MMP11-202ENST00000428253 SLC52A1Q9NWF4 448 aa26.68■■□□□ 1.86
MMP11-202ENST00000428253 PLA2R1Q13018 1463 aa26.68■■□□□ 1.86
MMP11-202ENST00000428253 SLC4A1APQ9BWU0 796 aaKnown RBP26.67■■□□□ 1.86
MMP11-202ENST00000428253 UBR1Q8IWV7 1749 aa26.67■■□□□ 1.86
MMP11-202ENST00000428253 TRIM26Q12899 539 aaPredicted RBP26.66■■□□□ 1.86
MMP11-202ENST00000428253 PKD2Q13563 968 aa26.66■■□□□ 1.86
MMP11-202ENST00000428253 KDM5AP29375 1690 aaKnown RBP26.65■■□□□ 1.86
MMP11-202ENST00000428253 SPHKAPQ2M3C7 1700 aa26.65■■□□□ 1.86
MMP11-202ENST00000428253 MPHOSPH9Q99550 1183 aa26.64■■□□□ 1.86
MMP11-202ENST00000428253 THEMISQ8N1K5 641 aaPredicted RBP26.63■■□□□ 1.85
MMP11-202ENST00000428253 TRPM2O94759 1503 aa26.6■■□□□ 1.85
MMP11-202ENST00000428253 ADGRB3O60242 1522 aa26.59■■□□□ 1.85
MMP11-202ENST00000428253 ARHGAP23Q9P227 1491 aa26.58■■□□□ 1.85
MMP11-202ENST00000428253 SLIT1O75093 1534 aa26.57■■□□□ 1.84
MMP11-202ENST00000428253 TMEM131LA2VDJ0 1609 aa26.56■■□□□ 1.84
MMP11-202ENST00000428253 FOXD1Q16676 465 aa26.54■■□□□ 1.84
MMP11-202ENST00000428253 NCKAP5LQ9HCH0 1330 aa26.54■■□□□ 1.84
MMP11-202ENST00000428253 NEURL4Q96JN8 1562 aa26.53■■□□□ 1.84
MMP11-202ENST00000428253 CLTCL1P53675 1640 aa26.53■■□□□ 1.84
MMP11-202ENST00000428253 TMEM2Q9UHN6 1383 aa26.52■■□□□ 1.84
MMP11-202ENST00000428253 MYO5BQ9ULV0 1848 aa26.52■■□□□ 1.84
MMP11-202ENST00000428253 POLR1AO95602 1720 aaPredicted RBP26.51■■□□□ 1.83
MMP11-202ENST00000428253 ANKLE2Q86XL3 938 aa26.5■■□□□ 1.83
MMP11-202ENST00000428253 DMRT2Q9Y5R5 561 aa26.5■■□□□ 1.83
MMP11-202ENST00000428253 MED14O60244 1454 aa26.49■■□□□ 1.83
MMP11-202ENST00000428253 STAG3Q9UJ98 1225 aa26.49■■□□□ 1.83
MMP11-202ENST00000428253 LTKP29376 864 aa26.47■■□□□ 1.83
MMP11-202ENST00000428253 ZFYVE9O95405 1425 aa26.47■■□□□ 1.83
MMP11-202ENST00000428253 SCAF11Q99590 1463 aaKnown RBP26.45■■□□□ 1.82
MMP11-202ENST00000428253 TXNDC2Q86VQ3 553 aa26.43■■□□□ 1.82
MMP11-202ENST00000428253 ANKRD30BQ9BXX2 1392 aa26.42■■□□□ 1.82
MMP11-202ENST00000428253 NPHP4O75161 1426 aaPredicted RBP26.41■■□□□ 1.82
MMP11-202ENST00000428253 KIF1BO60333 1816 aa26.41■■□□□ 1.82
MMP11-202ENST00000428253 RIMS2Q9UQ26 1411 aa26.4■■□□□ 1.82
MMP11-202ENST00000428253 CHGAP10645 457 aaKnown RBP26.4■■□□□ 1.82
MMP11-202ENST00000428253 CCDC144AA2RUR9 1427 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms