RNA–Protein interactions for RNA: ENST00000428134.1

LINC02088-201, Transcript of long intergenic non-protein coding RNA 2088, humanhuman

TSL 3 BASIC

Gene LINC02088, Length 620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02088-201ENST00000428134 RAB3GAP2Q9H2M9 1393 aa12.54□□□□□ -0.4
LINC02088-201ENST00000428134 MROH1Q8NDA8 1641 aa12.52□□□□□ -0.4
LINC02088-201ENST00000428134 RNF17Q9BXT8 1623 aaKnown RBP12.52□□□□□ -0.4
LINC02088-201ENST00000428134 DEPDC5O75140 1603 aa12.51□□□□□ -0.41
LINC02088-201ENST00000428134 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
LINC02088-201ENST00000428134 UNC13BO14795 1591 aa12.49□□□□□ -0.41
LINC02088-201ENST00000428134 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
LINC02088-201ENST00000428134 PRDM15P57071 1507 aaPredicted RBP12.48□□□□□ -0.41
LINC02088-201ENST00000428134 KDM5DQ9BY66 1539 aa12.48□□□□□ -0.41
LINC02088-201ENST00000428134 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
LINC02088-201ENST00000428134 GGT6Q6P531 493 aa12.48□□□□□ -0.41
LINC02088-201ENST00000428134 ADAMTSL3P82987 1691 aa12.48□□□□□ -0.41
LINC02088-201ENST00000428134 PZPP20742 1482 aa12.46□□□□□ -0.41
LINC02088-201ENST00000428134 NUP155O75694 1391 aa12.46□□□□□ -0.41
LINC02088-201ENST00000428134 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
LINC02088-201ENST00000428134 MLECQ14165 292 aa12.46□□□□□ -0.41
LINC02088-201ENST00000428134 LMTK2Q8IWU2 1503 aa12.46□□□□□ -0.42
LINC02088-201ENST00000428134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC02088-201ENST00000428134 ABCC3O15438 1527 aa12.45□□□□□ -0.42
LINC02088-201ENST00000428134 FAM135AQ9P2D6 1515 aa12.45□□□□□ -0.42
LINC02088-201ENST00000428134 IQGAP3Q86VI3 1631 aa12.44□□□□□ -0.42
LINC02088-201ENST00000428134 MADDQ8WXG6 1647 aa12.44□□□□□ -0.42
LINC02088-201ENST00000428134 WASHC2CQ9Y4E1 1318 aa12.42□□□□□ -0.42
LINC02088-201ENST00000428134 PTPRMP28827 1452 aa12.42□□□□□ -0.42
LINC02088-201ENST00000428134 TRIM52Q96A61 297 aa12.42□□□□□ -0.42
LINC02088-201ENST00000428134 KANK1Q14678 1352 aa12.42□□□□□ -0.42
LINC02088-201ENST00000428134 ARHGAP31Q2M1Z3 1444 aa12.41□□□□□ -0.42
LINC02088-201ENST00000428134 FBXO41Q8TF61 875 aa12.41□□□□□ -0.42
LINC02088-201ENST00000428134 MPHOSPH9Q99550 1183 aa12.41□□□□□ -0.42
LINC02088-201ENST00000428134 RIMS1Q86UR5 1692 aaKnown RBP12.41□□□□□ -0.42
LINC02088-201ENST00000428134 CNTLNQ9NXG0 1405 aa12.4□□□□□ -0.42
LINC02088-201ENST00000428134 ZMYM3Q14202 1370 aa12.4□□□□□ -0.42
LINC02088-201ENST00000428134 ZC3H13Q5T200 1668 aaKnown RBP12.39□□□□□ -0.43
LINC02088-201ENST00000428134 TET3O43151 1660 aa12.38□□□□□ -0.43
LINC02088-201ENST00000428134 NPATQ14207 1427 aa12.38□□□□□ -0.43
LINC02088-201ENST00000428134 EFCAB6Q5THR3 1501 aa12.38□□□□□ -0.43
LINC02088-201ENST00000428134 CEP152O94986 1710 aa12.38□□□□□ -0.43
LINC02088-201ENST00000428134 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
LINC02088-201ENST00000428134 DHX57Q6P158 1386 aaKnown RBP12.38□□□□□ -0.43
LINC02088-201ENST00000428134 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
LINC02088-201ENST00000428134 PKD2Q13563 968 aa12.37□□□□□ -0.43
LINC02088-201ENST00000428134 MROH2AA6NES4 1674 aa12.37□□□□□ -0.43
LINC02088-201ENST00000428134 CAMSAP1Q5T5Y3 1602 aa12.37□□□□□ -0.43
LINC02088-201ENST00000428134 FER1L4A9Z1Z3 1794 aa12.36□□□□□ -0.43
LINC02088-201ENST00000428134 PLA2R1Q13018 1463 aa12.36□□□□□ -0.43
LINC02088-201ENST00000428134 LMTK3Q96Q04 1460 aa12.36□□□□□ -0.43
LINC02088-201ENST00000428134 PTPRTO14522 1441 aa12.36□□□□□ -0.43
LINC02088-201ENST00000428134 E9PCH4 1651 aa12.35□□□□□ -0.43
LINC02088-201ENST00000428134 RPRD2Q5VT52 1461 aaKnown RBP12.35□□□□□ -0.43
LINC02088-201ENST00000428134 CEBPAP49715 358 aaPredicted RBP12.35□□□□□ -0.43
LINC02088-201ENST00000428134 FOXD1Q16676 465 aa12.35□□□□□ -0.43
LINC02088-201ENST00000428134 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
LINC02088-201ENST00000428134 NOS1P29475 1434 aa12.35□□□□□ -0.43
LINC02088-201ENST00000428134 ESF1Q9H501 851 aaKnown RBP12.34□□□□□ -0.43
LINC02088-201ENST00000428134 ANKRD30BQ9BXX2 1392 aa12.33□□□□□ -0.44
LINC02088-201ENST00000428134 ERVK-7P63135 1459 aa12.33□□□□□ -0.44
LINC02088-201ENST00000428134 C3P01024 1663 aa12.32□□□□□ -0.44
LINC02088-201ENST00000428134 SPATA31D1Q6ZQQ2 1576 aa12.32□□□□□ -0.44
LINC02088-201ENST00000428134 SYNMO15061 1565 aa12.3□□□□□ -0.44
LINC02088-201ENST00000428134 PREX1Q8TCU6 1659 aa12.29□□□□□ -0.44
LINC02088-201ENST00000428134 TRPM2O94759 1503 aa12.28□□□□□ -0.44
LINC02088-201ENST00000428134 TNRQ92752 1358 aa12.28□□□□□ -0.44
LINC02088-201ENST00000428134 IDI1Q13907 227 aa12.27□□□□□ -0.45
LINC02088-201ENST00000428134 CFAP65Q6ZU64 1925 aaKnown RBP12.27□□□□□ -0.45
LINC02088-201ENST00000428134 SPHKAPQ2M3C7 1700 aa12.26□□□□□ -0.45
LINC02088-201ENST00000428134 SLC52A1Q9NWF4 448 aa12.26□□□□□ -0.45
LINC02088-201ENST00000428134 UGGT1Q9NYU2 1555 aa12.26□□□□□ -0.45
LINC02088-201ENST00000428134 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
LINC02088-201ENST00000428134 CLSPNQ9HAW4 1339 aa12.25□□□□□ -0.45
LINC02088-201ENST00000428134 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
LINC02088-201ENST00000428134 SETD1BQ9UPS6 1966 aaKnown RBP12.24□□□□□ -0.45
LINC02088-201ENST00000428134 CLTCL1P53675 1640 aa12.23□□□□□ -0.45
LINC02088-201ENST00000428134 NLRP1Q9C000 1473 aa12.23□□□□□ -0.45
LINC02088-201ENST00000428134 HSPA2P54652 639 aa12.23□□□□□ -0.45
LINC02088-201ENST00000428134 SIN3AQ96ST3 1273 aa12.23□□□□□ -0.45
LINC02088-201ENST00000428134 SPATA31E1Q6ZUB1 1445 aa12.22□□□□□ -0.45
LINC02088-201ENST00000428134 CCDC144AA2RUR9 1427 aa12.21□□□□□ -0.45
LINC02088-201ENST00000428134 CCER1Q8TC90 406 aaPredicted RBP12.21□□□□□ -0.45
LINC02088-201ENST00000428134 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.46
LINC02088-201ENST00000428134 TMEM131LA2VDJ0 1609 aa12.19□□□□□ -0.46
LINC02088-201ENST00000428134 MYO3AQ8NEV4 1616 aa12.19□□□□□ -0.46
LINC02088-201ENST00000428134 NEURL4Q96JN8 1562 aa12.19□□□□□ -0.46
LINC02088-201ENST00000428134 ADGRB3O60242 1522 aa12.19□□□□□ -0.46
LINC02088-201ENST00000428134 CEP170BQ9Y4F5 1589 aaPredicted RBP12.18□□□□□ -0.46
LINC02088-201ENST00000428134 KDM5AP29375 1690 aaKnown RBP12.17□□□□□ -0.46
LINC02088-201ENST00000428134 UHRF1BP1Q6BDS2 1440 aa12.17□□□□□ -0.46
LINC02088-201ENST00000428134 STRCQ7RTU9 1775 aa12.17□□□□□ -0.46
LINC02088-201ENST00000428134 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
LINC02088-201ENST00000428134 UBR1Q8IWV7 1749 aa12.16□□□□□ -0.46
LINC02088-201ENST00000428134 ARHGAP23Q9P227 1491 aa12.15□□□□□ -0.46
LINC02088-201ENST00000428134 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
LINC02088-201ENST00000428134 CERKQ8TCT0 537 aa12.15□□□□□ -0.46
LINC02088-201ENST00000428134 ZFYVE9O95405 1425 aa12.14□□□□□ -0.47
LINC02088-201ENST00000428134 THEMISQ8N1K5 641 aaPredicted RBP12.14□□□□□ -0.47
LINC02088-201ENST00000428134 SLIT1O75093 1534 aa12.14□□□□□ -0.47
LINC02088-201ENST00000428134 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
LINC02088-201ENST00000428134 KIF1BO60333 1816 aa12.14□□□□□ -0.47
LINC02088-201ENST00000428134 RPGRIP1LQ68CZ1 1315 aa12.13□□□□□ -0.47
LINC02088-201ENST00000428134 CHGAP10645 457 aaKnown RBP12.13□□□□□ -0.47
LINC02088-201ENST00000428134 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms