RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 GPATCH8Q9UKJ3 1502 aaKnown RBP19.83■□□□□ 0.77
DDX39B-208ENST00000428098 THEMISQ8N1K5 641 aaPredicted RBP19.83■□□□□ 0.77
DDX39B-208ENST00000428098 NPHP4O75161 1426 aaPredicted RBP19.83■□□□□ 0.76
DDX39B-208ENST00000428098 MED14O60244 1454 aa19.81■□□□□ 0.76
DDX39B-208ENST00000428098 STRCP1A6NGW2 1772 aa19.81■□□□□ 0.76
DDX39B-208ENST00000428098 INO80Q9ULG1 1556 aaPredicted RBP19.8■□□□□ 0.76
DDX39B-208ENST00000428098 KIAA1107Q9UPP5 1409 aa19.8■□□□□ 0.76
DDX39B-208ENST00000428098 CFDP1Q9UEE9 299 aaPredicted RBP19.77■□□□□ 0.76
DDX39B-208ENST00000428098 MIA2Q96PC5 1412 aa19.76■□□□□ 0.75
DDX39B-208ENST00000428098 CASKIN1Q8WXD9 1431 aa19.76■□□□□ 0.75
DDX39B-208ENST00000428098 ZNF644Q9H582 1327 aaPredicted RBP19.75■□□□□ 0.75
DDX39B-208ENST00000428098 KIF3BO15066 747 aa19.74■□□□□ 0.75
DDX39B-208ENST00000428098 PZPP20742 1482 aa19.73■□□□□ 0.75
DDX39B-208ENST00000428098 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
DDX39B-208ENST00000428098 DEPDC5O75140 1603 aa19.73■□□□□ 0.75
DDX39B-208ENST00000428098 DHX29Q7Z478 1369 aaKnown RBP19.73■□□□□ 0.75
DDX39B-208ENST00000428098 UGGT1Q9NYU2 1555 aa19.71■□□□□ 0.75
DDX39B-208ENST00000428098 PLEKHH2Q8IVE3 1493 aa19.71■□□□□ 0.75
DDX39B-208ENST00000428098 WASHC2CQ9Y4E1 1318 aa19.71■□□□□ 0.75
DDX39B-208ENST00000428098 RNF17Q9BXT8 1623 aaKnown RBP19.7■□□□□ 0.74
DDX39B-208ENST00000428098 ADGBQ8N7X0 1667 aa19.7■□□□□ 0.74
DDX39B-208ENST00000428098 IQGAP1P46940 1657 aa19.69■□□□□ 0.74
DDX39B-208ENST00000428098 FAM135AQ9P2D6 1515 aa19.69■□□□□ 0.74
DDX39B-208ENST00000428098 NLRP1Q9C000 1473 aa19.68■□□□□ 0.74
DDX39B-208ENST00000428098 MBD5Q9P267 1494 aa19.67■□□□□ 0.74
DDX39B-208ENST00000428098 FAM135BQ49AJ0 1406 aa19.66■□□□□ 0.74
DDX39B-208ENST00000428098 CCNB3Q8WWL7 1395 aa19.65■□□□□ 0.74
DDX39B-208ENST00000428098 SETD1AO15047 1707 aaKnown RBP19.65■□□□□ 0.74
DDX39B-208ENST00000428098 UPF1Q92900 1129 aaKnown RBP eCLIP19.64■□□□□ 0.73
DDX39B-208ENST00000428098 RTEL1-TNFRSF6BF6WH68 1400 aa19.64■□□□□ 0.73
DDX39B-208ENST00000428098 SYNMO15061 1565 aa19.63■□□□□ 0.73
DDX39B-208ENST00000428098 KDM5DQ9BY66 1539 aa19.63■□□□□ 0.73
DDX39B-208ENST00000428098 LTKP29376 864 aa19.63■□□□□ 0.73
DDX39B-208ENST00000428098 XIRP1Q702N8 1843 aaKnown RBP19.62■□□□□ 0.73
DDX39B-208ENST00000428098 ZC3H13Q5T200 1668 aaKnown RBP19.59■□□□□ 0.73
DDX39B-208ENST00000428098 FYCO1Q9BQS8 1478 aa19.56■□□□□ 0.72
DDX39B-208ENST00000428098 TXNDC2Q86VQ3 553 aa19.56■□□□□ 0.72
DDX39B-208ENST00000428098 RBM33Q96EV2 1170 aaKnown RBP19.55■□□□□ 0.72
DDX39B-208ENST00000428098 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
DDX39B-208ENST00000428098 SRCAPQ6ZRS2 3230 aa19.53■□□□□ 0.72
DDX39B-208ENST00000428098 SCAF11Q99590 1463 aaKnown RBP19.53■□□□□ 0.72
DDX39B-208ENST00000428098 TMEM94Q12767 1356 aa19.52■□□□□ 0.72
DDX39B-208ENST00000428098 NCOA2Q15596 1464 aa19.52■□□□□ 0.72
DDX39B-208ENST00000428098 ROBO1Q9Y6N7 1651 aa19.5■□□□□ 0.71
DDX39B-208ENST00000428098 TRIM52Q96A61 297 aa19.5■□□□□ 0.71
DDX39B-208ENST00000428098 TIAM1Q13009 1591 aa19.49■□□□□ 0.71
DDX39B-208ENST00000428098 ERVK-7P63135 1459 aa19.48■□□□□ 0.71
DDX39B-208ENST00000428098 MTUS2Q5JR59 1369 aa19.48■□□□□ 0.71
DDX39B-208ENST00000428098 ARHGAP23Q9P227 1491 aa19.48■□□□□ 0.71
DDX39B-208ENST00000428098 PROSER2Q86WR7 435 aaPredicted RBP19.47■□□□□ 0.71
DDX39B-208ENST00000428098 UBR1Q8IWV7 1749 aa19.47■□□□□ 0.71
DDX39B-208ENST00000428098 KCNA6P17658 529 aa19.46■□□□□ 0.71
DDX39B-208ENST00000428098 ABCC3O15438 1527 aa19.46■□□□□ 0.71
DDX39B-208ENST00000428098 SLIT1O75093 1534 aa19.45■□□□□ 0.7
DDX39B-208ENST00000428098 CFAP65Q6ZU64 1925 aaKnown RBP19.45■□□□□ 0.7
DDX39B-208ENST00000428098 JCADQ9P266 1359 aa19.44■□□□□ 0.7
DDX39B-208ENST00000428098 CCDC141Q6ZP82 1450 aa19.44■□□□□ 0.7
DDX39B-208ENST00000428098 RSPH4AQ5TD94 716 aa19.44■□□□□ 0.7
DDX39B-208ENST00000428098 SLAIN2Q9P270 581 aa19.44■□□□□ 0.7
DDX39B-208ENST00000428098 EID1Q9Y6B2 187 aa19.43■□□□□ 0.7
DDX39B-208ENST00000428098 MAP3K1Q13233 1512 aa19.42■□□□□ 0.7
DDX39B-208ENST00000428098 SLC26A8Q96RN1 970 aa19.41■□□□□ 0.7
DDX39B-208ENST00000428098 LRP6O75581 1613 aa19.4■□□□□ 0.7
DDX39B-208ENST00000428098 ZNF772Q68DY9 489 aaPredicted RBP19.4■□□□□ 0.7
DDX39B-208ENST00000428098 TSPY4P0CV99 314 aa19.38■□□□□ 0.69
DDX39B-208ENST00000428098 TSPY10P0CW01 314 aa19.38■□□□□ 0.69
DDX39B-208ENST00000428098 TMEM2Q9UHN6 1383 aa19.38■□□□□ 0.69
DDX39B-208ENST00000428098 PHLPP1O60346 1717 aa19.37■□□□□ 0.69
DDX39B-208ENST00000428098 RXRBP28702 533 aa19.37■□□□□ 0.69
DDX39B-208ENST00000428098 CAMSAP2Q08AD1 1489 aa19.36■□□□□ 0.69
DDX39B-208ENST00000428098 CEP162Q5TB80 1403 aa19.36■□□□□ 0.69
DDX39B-208ENST00000428098 MEX3CQ5U5Q3 659 aaKnown RBP19.35■□□□□ 0.69
DDX39B-208ENST00000428098 LRRC9Q6ZRR7 1453 aa19.35■□□□□ 0.69
DDX39B-208ENST00000428098 SPATA31A6Q5VVP1 1343 aa19.34■□□□□ 0.69
DDX39B-208ENST00000428098 MROH1Q8NDA8 1641 aa19.34■□□□□ 0.69
DDX39B-208ENST00000428098 PRDM15P57071 1507 aaPredicted RBP19.34■□□□□ 0.69
DDX39B-208ENST00000428098 TET3O43151 1660 aa19.33■□□□□ 0.69
DDX39B-208ENST00000428098 COL16A1Q07092 1604 aaPredicted RBP19.32■□□□□ 0.68
DDX39B-208ENST00000428098 MSH6P52701 1360 aa19.32■□□□□ 0.68
DDX39B-208ENST00000428098 IDI1Q13907 227 aa19.3■□□□□ 0.68
DDX39B-208ENST00000428098 CEP152O94986 1710 aa19.3■□□□□ 0.68
DDX39B-208ENST00000428098 STAG3Q9UJ98 1225 aa19.29■□□□□ 0.68
DDX39B-208ENST00000428098 EHBP1L1Q8N3D4 1523 aa19.29■□□□□ 0.68
DDX39B-208ENST00000428098 PIK3C2BO00750 1634 aa19.29■□□□□ 0.68
DDX39B-208ENST00000428098 ARHGEF5Q12774 1597 aa19.28■□□□□ 0.68
DDX39B-208ENST00000428098 ARHGAP31Q2M1Z3 1444 aa19.27■□□□□ 0.68
DDX39B-208ENST00000428098 FGD6Q6ZV73 1430 aa19.26■□□□□ 0.67
DDX39B-208ENST00000428098 CDK12Q9NYV4 1490 aaPredicted RBP19.26■□□□□ 0.67
DDX39B-208ENST00000428098 NKTRP30414 1462 aaKnown RBP19.25■□□□□ 0.67
DDX39B-208ENST00000428098 NUTM2BA6NNL0 878 aaPredicted RBP19.25■□□□□ 0.67
DDX39B-208ENST00000428098 NUTM2EB1AL46 878 aaPredicted RBP19.25■□□□□ 0.67
DDX39B-208ENST00000428098 NUTM2AQ8IVF1 878 aaPredicted RBP19.25■□□□□ 0.67
DDX39B-208ENST00000428098 NWD1Q149M9 1564 aa19.23■□□□□ 0.67
DDX39B-208ENST00000428098 AFF2P51816 1311 aa19.23■□□□□ 0.67
DDX39B-208ENST00000428098 EIF2AK4Q9P2K8 1649 aaKnown RBP19.22■□□□□ 0.67
DDX39B-208ENST00000428098 EFCAB6Q5THR3 1501 aa19.21■□□□□ 0.67
DDX39B-208ENST00000428098 BCANQ96GW7 911 aa19.21■□□□□ 0.67
DDX39B-208ENST00000428098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.677e-16■■□□□ 11.9
DDX39B-208ENST00000428098 MAST1Q9Y2H9 1570 aa19.19■□□□□ 0.66
DDX39B-208ENST00000428098 RGS12O14924 1447 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms