RNA–Protein interactions for RNA: ENST00000428012.1

KDM5C-206, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-206ENST00000428012 POLR1AO95602 1720 aaPredicted RBP22.91■■□□□ 1.26
KDM5C-206ENST00000428012 TNRQ92752 1358 aa22.9■■□□□ 1.26
KDM5C-206ENST00000428012 PIP4K2BP78356 416 aa22.9■■□□□ 1.26
KDM5C-206ENST00000428012 KIF3BO15066 747 aa22.89■■□□□ 1.25
KDM5C-206ENST00000428012 SCAF1Q9H7N4 1312 aaKnown RBP22.88■■□□□ 1.25
KDM5C-206ENST00000428012 SHANK2Q9UPX8 1470 aa22.88■■□□□ 1.25
KDM5C-206ENST00000428012 MED1Q15648 1581 aaPredicted RBP22.88■■□□□ 1.25
KDM5C-206ENST00000428012 PZPP20742 1482 aa22.87■■□□□ 1.25
KDM5C-206ENST00000428012 ALKQ9UM73 1620 aa22.87■■□□□ 1.25
KDM5C-206ENST00000428012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.87■■□□□ 1.256e-6■□□□□ 9.1
KDM5C-206ENST00000428012 CPS1P31327 1500 aa22.86■■□□□ 1.25
KDM5C-206ENST00000428012 EHBP1L1Q8N3D4 1523 aa22.86■■□□□ 1.25
KDM5C-206ENST00000428012 VWDEQ8N2E2 1590 aa22.85■■□□□ 1.25
KDM5C-206ENST00000428012 CEP162Q5TB80 1403 aa22.85■■□□□ 1.25
KDM5C-206ENST00000428012 KDM5DQ9BY66 1539 aa22.84■■□□□ 1.25
KDM5C-206ENST00000428012 TOM1O60784 492 aa22.82■■□□□ 1.24
KDM5C-206ENST00000428012 MIA2Q96PC5 1412 aa22.82■■□□□ 1.24
KDM5C-206ENST00000428012 CCDC141Q6ZP82 1450 aa22.81■■□□□ 1.24
KDM5C-206ENST00000428012 WASHC2CQ9Y4E1 1318 aa22.81■■□□□ 1.24
KDM5C-206ENST00000428012 CAMSAP2Q08AD1 1489 aa22.8■■□□□ 1.24
KDM5C-206ENST00000428012 ANKLE2Q86XL3 938 aa22.8■■□□□ 1.24
KDM5C-206ENST00000428012 STRCP1A6NGW2 1772 aa22.78■■□□□ 1.24
KDM5C-206ENST00000428012 MED14O60244 1454 aa22.78■■□□□ 1.24
KDM5C-206ENST00000428012 FAM135AQ9P2D6 1515 aa22.77■■□□□ 1.24
KDM5C-206ENST00000428012 UGGT1Q9NYU2 1555 aa22.77■■□□□ 1.24
KDM5C-206ENST00000428012 NPHP4O75161 1426 aaPredicted RBP22.77■■□□□ 1.24
KDM5C-206ENST00000428012 THEMISQ8N1K5 641 aaPredicted RBP22.77■■□□□ 1.24
KDM5C-206ENST00000428012 NCOA2Q15596 1464 aa22.77■■□□□ 1.24
KDM5C-206ENST00000428012 DEPDC5O75140 1603 aa22.76■■□□□ 1.23
KDM5C-206ENST00000428012 NLRP1Q9C000 1473 aa22.76■■□□□ 1.23
KDM5C-206ENST00000428012 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
KDM5C-206ENST00000428012 RSPH4AQ5TD94 716 aa22.71■■□□□ 1.23
KDM5C-206ENST00000428012 LRRC7Q96NW7 1537 aa22.7■■□□□ 1.22
KDM5C-206ENST00000428012 ARHGEF5Q12774 1597 aa22.7■■□□□ 1.22
KDM5C-206ENST00000428012 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
KDM5C-206ENST00000428012 ABCC3O15438 1527 aa22.68■■□□□ 1.22
KDM5C-206ENST00000428012 RNF17Q9BXT8 1623 aaKnown RBP22.68■■□□□ 1.22
KDM5C-206ENST00000428012 CFAP65Q6ZU64 1925 aaKnown RBP22.65■■□□□ 1.22
KDM5C-206ENST00000428012 MROH1Q8NDA8 1641 aa22.65■■□□□ 1.22
KDM5C-206ENST00000428012 ERVK-7P63135 1459 aa22.65■■□□□ 1.22
KDM5C-206ENST00000428012 TSPY4P0CV99 314 aa22.64■■□□□ 1.21
KDM5C-206ENST00000428012 TSPY10P0CW01 314 aa22.64■■□□□ 1.21
KDM5C-206ENST00000428012 ZC3H13Q5T200 1668 aaKnown RBP22.64■■□□□ 1.21
KDM5C-206ENST00000428012 PHF23Q9BUL5 403 aaPredicted RBP22.63■■□□□ 1.21
KDM5C-206ENST00000428012 UBR1Q8IWV7 1749 aa22.6■■□□□ 1.21
KDM5C-206ENST00000428012 MAST1Q9Y2H9 1570 aa22.6■■□□□ 1.21
KDM5C-206ENST00000428012 CEP152O94986 1710 aa22.6■■□□□ 1.21
KDM5C-206ENST00000428012 LTKP29376 864 aa22.59■■□□□ 1.21
KDM5C-206ENST00000428012 RGS17Q9UGC6 210 aaPredicted RBP22.59■■□□□ 1.21
KDM5C-206ENST00000428012 SYNMO15061 1565 aa22.59■■□□□ 1.21
KDM5C-206ENST00000428012 XIRP1Q702N8 1843 aaKnown RBP22.57■■□□□ 1.2
KDM5C-206ENST00000428012 EIF2AK4Q9P2K8 1649 aaKnown RBP22.57■■□□□ 1.2
KDM5C-206ENST00000428012 LRRC9Q6ZRR7 1453 aa22.55■■□□□ 1.2
KDM5C-206ENST00000428012 SCAF11Q99590 1463 aaKnown RBP22.54■■□□□ 1.2
KDM5C-206ENST00000428012 ARHGAP23Q9P227 1491 aa22.54■■□□□ 1.2
KDM5C-206ENST00000428012 KANK4Q5T7N3 995 aaPredicted RBP22.53■■□□□ 1.2
KDM5C-206ENST00000428012 SLIT1O75093 1534 aa22.52■■□□□ 1.19
KDM5C-206ENST00000428012 TXNDC2Q86VQ3 553 aa22.51■■□□□ 1.19
KDM5C-206ENST00000428012 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
KDM5C-206ENST00000428012 ARHGAP31Q2M1Z3 1444 aa22.47■■□□□ 1.19
KDM5C-206ENST00000428012 MYOM3Q5VTT5 1437 aa22.45■■□□□ 1.18
KDM5C-206ENST00000428012 VPS8Q8N3P4 1428 aa22.45■■□□□ 1.18
KDM5C-206ENST00000428012 PRDM15P57071 1507 aaPredicted RBP22.45■■□□□ 1.18
KDM5C-206ENST00000428012 PIK3C2BO00750 1634 aa22.44■■□□□ 1.18
KDM5C-206ENST00000428012 FAM135BQ49AJ0 1406 aa22.41■■□□□ 1.18
KDM5C-206ENST00000428012 KIF15Q9NS87 1388 aa22.41■■□□□ 1.18
KDM5C-206ENST00000428012 TMEM2Q9UHN6 1383 aa22.41■■□□□ 1.18
KDM5C-206ENST00000428012 POTEAQ6S8J7 498 aa22.41■■□□□ 1.18
KDM5C-206ENST00000428012 RRP7BPQ9NSQ0 103 aa22.41■■□□□ 1.18
KDM5C-206ENST00000428012 ABCC5O15440 1437 aa22.4■■□□□ 1.18
KDM5C-206ENST00000428012 RBM33Q96EV2 1170 aaKnown RBP22.4■■□□□ 1.18
KDM5C-206ENST00000428012 TMEM94Q12767 1356 aa22.39■■□□□ 1.18
KDM5C-206ENST00000428012 LOC105371045A0A1W2PR82 267 aa22.39■■□□□ 1.17
KDM5C-206ENST00000428012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.39■■□□□ 1.173e-7■■□□□ 13.1
KDM5C-206ENST00000428012 EID1Q9Y6B2 187 aa22.39■■□□□ 1.17
KDM5C-206ENST00000428012 MAP3K1Q13233 1512 aa22.37■■□□□ 1.17
KDM5C-206ENST00000428012 CROCC2H7BZ55 1655 aa22.37■■□□□ 1.17
KDM5C-206ENST00000428012 IDI1Q13907 227 aa22.37■■□□□ 1.17
KDM5C-206ENST00000428012 ERBINQ96RT1 1412 aa22.37■■□□□ 1.17
KDM5C-206ENST00000428012 TET3O43151 1660 aa22.36■■□□□ 1.17
KDM5C-206ENST00000428012 SLC26A8Q96RN1 970 aa22.35■■□□□ 1.17
KDM5C-206ENST00000428012 ROBO1Q9Y6N7 1651 aa22.34■■□□□ 1.17
KDM5C-206ENST00000428012 KCNA6P17658 529 aa22.34■■□□□ 1.17
KDM5C-206ENST00000428012 EFCAB6Q5THR3 1501 aa22.33■■□□□ 1.17
KDM5C-206ENST00000428012 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
KDM5C-206ENST00000428012 STAG3Q9UJ98 1225 aa22.31■■□□□ 1.16
KDM5C-206ENST00000428012 PTPN23Q9H3S7 1636 aa22.31■■□□□ 1.16
KDM5C-206ENST00000428012 KDM5AP29375 1690 aaKnown RBP22.3■■□□□ 1.16
KDM5C-206ENST00000428012 LMTK2Q8IWU2 1503 aa22.3■■□□□ 1.16
KDM5C-206ENST00000428012 DAPK1P53355 1430 aa22.3■■□□□ 1.16
KDM5C-206ENST00000428012 NOS1P29475 1434 aa22.28■■□□□ 1.16
KDM5C-206ENST00000428012 CHIC2Q9UKJ5 165 aa22.27■■□□□ 1.16
KDM5C-206ENST00000428012 KANK1Q14678 1352 aa22.26■■□□□ 1.15
KDM5C-206ENST00000428012 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
KDM5C-206ENST00000428012 ADGRB3O60242 1522 aa22.24■■□□□ 1.15
KDM5C-206ENST00000428012 SETD1AO15047 1707 aaKnown RBP22.23■■□□□ 1.15
KDM5C-206ENST00000428012 NKTRP30414 1462 aaKnown RBP22.22■■□□□ 1.15
KDM5C-206ENST00000428012 FGD6Q6ZV73 1430 aa22.22■■□□□ 1.15
KDM5C-206ENST00000428012 SLAIN2Q9P270 581 aa22.21■■□□□ 1.15
KDM5C-206ENST00000428012 PHLPP1O60346 1717 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms