RNA–Protein interactions for RNA: ENST00000427217.5

ARPC1B-205, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-205ENST00000427217 CNTLNQ9NXG0 1405 aa30.61■■■□□ 2.49
ARPC1B-205ENST00000427217 MROH1Q8NDA8 1641 aa30.61■■■□□ 2.49
ARPC1B-205ENST00000427217 ZC3H13Q5T200 1668 aaKnown RBP30.61■■■□□ 2.49
ARPC1B-205ENST00000427217 C3P01024 1663 aa30.6■■■□□ 2.49
ARPC1B-205ENST00000427217 RRP7BPQ9NSQ0 103 aa30.59■■■□□ 2.49
ARPC1B-205ENST00000427217 KIF3BO15066 747 aa30.58■■■□□ 2.49
ARPC1B-205ENST00000427217 PPP6R1Q9UPN7 881 aa30.58■■■□□ 2.49
ARPC1B-205ENST00000427217 PRDM15P57071 1507 aaPredicted RBP30.57■■■□□ 2.48
ARPC1B-205ENST00000427217 KDM5DQ9BY66 1539 aa30.56■■■□□ 2.48
ARPC1B-205ENST00000427217 GCC2Q8IWJ2 1684 aa30.55■■■□□ 2.48
ARPC1B-205ENST00000427217 GGT6Q6P531 493 aa30.53■■■□□ 2.48
ARPC1B-205ENST00000427217 CEP152O94986 1710 aa30.51■■■□□ 2.47
ARPC1B-205ENST00000427217 ANKRD50Q9ULJ7 1429 aa30.51■■■□□ 2.47
ARPC1B-205ENST00000427217 ITGAEP38570 1179 aa30.5■■■□□ 2.47
ARPC1B-205ENST00000427217 ESF1Q9H501 851 aaKnown RBP30.5■■■□□ 2.47
ARPC1B-205ENST00000427217 UNC13BO14795 1591 aa30.47■■■□□ 2.47
ARPC1B-205ENST00000427217 SETD1BQ9UPS6 1966 aaKnown RBP30.46■■■□□ 2.47
ARPC1B-205ENST00000427217 ABCC3O15438 1527 aa30.46■■■□□ 2.47
ARPC1B-205ENST00000427217 VWDEQ8N2E2 1590 aa30.45■■■□□ 2.46
ARPC1B-205ENST00000427217 CAMSAP1Q5T5Y3 1602 aa30.44■■■□□ 2.46
ARPC1B-205ENST00000427217 PREX1Q8TCU6 1659 aa30.42■■■□□ 2.46
ARPC1B-205ENST00000427217 ZMYM3Q14202 1370 aa30.41■■■□□ 2.46
ARPC1B-205ENST00000427217 HFM1A2PYH4 1435 aa30.39■■■□□ 2.46
ARPC1B-205ENST00000427217 WASHC2CQ9Y4E1 1318 aa30.38■■■□□ 2.45
ARPC1B-205ENST00000427217 NAIPQ13075 1403 aa30.38■■■□□ 2.45
ARPC1B-205ENST00000427217 LMTK2Q8IWU2 1503 aa30.37■■■□□ 2.45
ARPC1B-205ENST00000427217 NPATQ14207 1427 aa30.36■■■□□ 2.45
ARPC1B-205ENST00000427217 PZPP20742 1482 aa30.36■■■□□ 2.45
ARPC1B-205ENST00000427217 KANK1Q14678 1352 aa30.35■■■□□ 2.45
ARPC1B-205ENST00000427217 IQGAP3Q86VI3 1631 aa30.34■■■□□ 2.45
ARPC1B-205ENST00000427217 CEBPAP49715 358 aaPredicted RBP30.32■■■□□ 2.44
ARPC1B-205ENST00000427217 TET3O43151 1660 aa30.32■■■□□ 2.44
ARPC1B-205ENST00000427217 CFAP65Q6ZU64 1925 aaKnown RBP30.29■■■□□ 2.44
ARPC1B-205ENST00000427217 ARHGAP31Q2M1Z3 1444 aa30.29■■■□□ 2.44
ARPC1B-205ENST00000427217 EFCAB6Q5THR3 1501 aa30.28■■■□□ 2.44
ARPC1B-205ENST00000427217 MYO3AQ8NEV4 1616 aa30.28■■■□□ 2.44
ARPC1B-205ENST00000427217 ZNF142P52746 1687 aaPredicted RBP30.27■■■□□ 2.44
ARPC1B-205ENST00000427217 PLPPR3Q6T4P5 718 aa30.27■■■□□ 2.44
ARPC1B-205ENST00000427217 SPATA31D1Q6ZQQ2 1576 aa30.26■■■□□ 2.43
ARPC1B-205ENST00000427217 LMTK3Q96Q04 1460 aa30.25■■■□□ 2.43
ARPC1B-205ENST00000427217 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.25■■■□□ 2.433e-7■□□□□ 9.7
ARPC1B-205ENST00000427217 UHRF1BP1Q6BDS2 1440 aa30.21■■■□□ 2.43
ARPC1B-205ENST00000427217 E9PCH4 1651 aa30.2■■■□□ 2.42
ARPC1B-205ENST00000427217 ERVK-7P63135 1459 aa30.19■■■□□ 2.42
ARPC1B-205ENST00000427217 RPRD2Q5VT52 1461 aaKnown RBP30.19■■■□□ 2.42
ARPC1B-205ENST00000427217 CEP170BQ9Y4F5 1589 aaPredicted RBP30.15■■■□□ 2.42
ARPC1B-205ENST00000427217 NUP155O75694 1391 aa30.15■■■□□ 2.42
ARPC1B-205ENST00000427217 TNRQ92752 1358 aa30.14■■■□□ 2.41
ARPC1B-205ENST00000427217 FBXO31Q5XUX0 539 aaPredicted RBP30.11■■■□□ 2.41
ARPC1B-205ENST00000427217 SETD5Q9C0A6 1442 aa30.11■■■□□ 2.41
ARPC1B-205ENST00000427217 NLRP1Q9C000 1473 aa30.11■■■□□ 2.41
ARPC1B-205ENST00000427217 A2ML1A8K2U0 1454 aa30.08■■■□□ 2.41
ARPC1B-205ENST00000427217 ACIN1Q9UKV3 1341 aaKnown RBP30.08■■■□□ 2.41
ARPC1B-205ENST00000427217 SYNMO15061 1565 aa30.07■■■□□ 2.4
ARPC1B-205ENST00000427217 NOS1P29475 1434 aa30.06■■■□□ 2.4
ARPC1B-205ENST00000427217 SPHKAPQ2M3C7 1700 aa30.06■■■□□ 2.4
ARPC1B-205ENST00000427217 KDM5AP29375 1690 aaKnown RBP30.06■■■□□ 2.4
ARPC1B-205ENST00000427217 UBR1Q8IWV7 1749 aa30.02■■■□□ 2.4
ARPC1B-205ENST00000427217 PIK3C2BO00750 1634 aa30.02■■■□□ 2.4
ARPC1B-205ENST00000427217 RAB3GAP2Q9H2M9 1393 aa30■■■□□ 2.39
ARPC1B-205ENST00000427217 STRCQ7RTU9 1775 aa30■■■□□ 2.39
ARPC1B-205ENST00000427217 UGGT1Q9NYU2 1555 aa29.98■■■□□ 2.39
ARPC1B-205ENST00000427217 TRIM52Q96A61 297 aa29.97■■■□□ 2.39
ARPC1B-205ENST00000427217 POLR1AO95602 1720 aaPredicted RBP29.96■■■□□ 2.39
ARPC1B-205ENST00000427217 PLA2R1Q13018 1463 aa29.95■■■□□ 2.39
ARPC1B-205ENST00000427217 HSPA2P54652 639 aa29.94■■■□□ 2.38
ARPC1B-205ENST00000427217 MYO5BQ9ULV0 1848 aa29.92■■■□□ 2.38
ARPC1B-205ENST00000427217 PTPRTO14522 1441 aa29.91■■■□□ 2.38
ARPC1B-205ENST00000427217 HRCP23327 699 aa29.91■■■□□ 2.38
ARPC1B-205ENST00000427217 ADGRB3O60242 1522 aa29.91■■■□□ 2.38
ARPC1B-205ENST00000427217 TRPM2O94759 1503 aa29.91■■■□□ 2.38
ARPC1B-205ENST00000427217 TRIM26Q12899 539 aaPredicted RBP29.88■■■□□ 2.37
ARPC1B-205ENST00000427217 SLC52A1Q9NWF4 448 aa29.88■■■□□ 2.37
ARPC1B-205ENST00000427217 SLC4A1APQ9BWU0 796 aaKnown RBP29.87■■■□□ 2.37
ARPC1B-205ENST00000427217 TMEM131LA2VDJ0 1609 aa29.86■■■□□ 2.37
ARPC1B-205ENST00000427217 KIF1BO60333 1816 aa29.84■■■□□ 2.37
ARPC1B-205ENST00000427217 CLTCL1P53675 1640 aa29.83■■■□□ 2.37
ARPC1B-205ENST00000427217 SLIT1O75093 1534 aa29.83■■■□□ 2.37
ARPC1B-205ENST00000427217 PKD2Q13563 968 aa29.83■■■□□ 2.37
ARPC1B-205ENST00000427217 IDI1Q13907 227 aa29.83■■■□□ 2.37
ARPC1B-205ENST00000427217 THEMISQ8N1K5 641 aaPredicted RBP29.83■■■□□ 2.37
ARPC1B-205ENST00000427217 MPHOSPH9Q99550 1183 aa29.81■■■□□ 2.36
ARPC1B-205ENST00000427217 ARHGAP23Q9P227 1491 aa29.8■■■□□ 2.36
ARPC1B-205ENST00000427217 NEURL4Q96JN8 1562 aa29.79■■■□□ 2.36
ARPC1B-205ENST00000427217 STAG3Q9UJ98 1225 aa29.72■■■□□ 2.35
ARPC1B-205ENST00000427217 MED14O60244 1454 aa29.72■■■□□ 2.35
ARPC1B-205ENST00000427217 IQGAP1P46940 1657 aa29.72■■■□□ 2.35
ARPC1B-205ENST00000427217 DMRT2Q9Y5R5 561 aa29.71■■■□□ 2.35
ARPC1B-205ENST00000427217 TMEM2Q9UHN6 1383 aa29.71■■■□□ 2.35
ARPC1B-205ENST00000427217 SCAF11Q99590 1463 aaKnown RBP29.69■■■□□ 2.34
ARPC1B-205ENST00000427217 ILDR1Q86SU0 546 aaPredicted RBP29.68■■■□□ 2.34
ARPC1B-205ENST00000427217 ANKLE2Q86XL3 938 aa29.67■■■□□ 2.34
ARPC1B-205ENST00000427217 NCKAP5LQ9HCH0 1330 aa29.67■■■□□ 2.34
ARPC1B-205ENST00000427217 ZFYVE9O95405 1425 aa29.65■■■□□ 2.34
ARPC1B-205ENST00000427217 FOXD1Q16676 465 aa29.65■■■□□ 2.34
ARPC1B-205ENST00000427217 CCDC144AA2RUR9 1427 aa29.63■■■□□ 2.33
ARPC1B-205ENST00000427217 NPHP4O75161 1426 aaPredicted RBP29.62■■■□□ 2.33
ARPC1B-205ENST00000427217 EID1Q9Y6B2 187 aa29.59■■■□□ 2.33
ARPC1B-205ENST00000427217 RIMS2Q9UQ26 1411 aa29.59■■■□□ 2.33
ARPC1B-205ENST00000427217 PPLO60437 1756 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms