RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 HSPA1LP34931 641 aa14.07□□□□□ -0.16
VNN3-208ENST00000427187 KIF3BO15066 747 aa14.05□□□□□ -0.16
VNN3-208ENST00000427187 TNRQ92752 1358 aa14.05□□□□□ -0.16
VNN3-208ENST00000427187 EHBP1L1Q8N3D4 1523 aa14.05□□□□□ -0.16
VNN3-208ENST00000427187 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
VNN3-208ENST00000427187 DHX29Q7Z478 1369 aaKnown RBP14.04□□□□□ -0.16
VNN3-208ENST00000427187 SENP3Q9H4L4 574 aaPredicted RBP14.03□□□□□ -0.16
VNN3-208ENST00000427187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.03□□□□□ -0.16
VNN3-208ENST00000427187 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
VNN3-208ENST00000427187 KDM5DQ9BY66 1539 aa14.03□□□□□ -0.16
VNN3-208ENST00000427187 PZPP20742 1482 aa14.02□□□□□ -0.16
VNN3-208ENST00000427187 RTEL1-TNFRSF6BF6WH68 1400 aa14.02□□□□□ -0.16
VNN3-208ENST00000427187 CPS1P31327 1500 aa14.01□□□□□ -0.17
VNN3-208ENST00000427187 CAMSAP2Q08AD1 1489 aa14.01□□□□□ -0.17
VNN3-208ENST00000427187 VWDEQ8N2E2 1590 aa14□□□□□ -0.17
VNN3-208ENST00000427187 CCDC141Q6ZP82 1450 aa14□□□□□ -0.17
VNN3-208ENST00000427187 CEP162Q5TB80 1403 aa14□□□□□ -0.17
VNN3-208ENST00000427187 WASHC2CQ9Y4E1 1318 aa14□□□□□ -0.17
VNN3-208ENST00000427187 TOM1O60784 492 aa14□□□□□ -0.17
VNN3-208ENST00000427187 ALKQ9UM73 1620 aa13.99□□□□□ -0.17
VNN3-208ENST00000427187 UGGT1Q9NYU2 1555 aa13.98□□□□□ -0.17
VNN3-208ENST00000427187 ANKLE2Q86XL3 938 aa13.98□□□□□ -0.17
VNN3-208ENST00000427187 NPHP4O75161 1426 aaPredicted RBP13.98□□□□□ -0.17
VNN3-208ENST00000427187 NCOA2Q15596 1464 aa13.97□□□□□ -0.17
VNN3-208ENST00000427187 MIA2Q96PC5 1412 aa13.97□□□□□ -0.17
VNN3-208ENST00000427187 STRCP1A6NGW2 1772 aa13.96□□□□□ -0.17
VNN3-208ENST00000427187 IQGAP1P46940 1657 aa13.95□□□□□ -0.18
VNN3-208ENST00000427187 NLRP1Q9C000 1473 aa13.95□□□□□ -0.18
VNN3-208ENST00000427187 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
VNN3-208ENST00000427187 FAM135AQ9P2D6 1515 aa13.95□□□□□ -0.18
VNN3-208ENST00000427187 DEPDC5O75140 1603 aa13.94□□□□□ -0.18
VNN3-208ENST00000427187 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
VNN3-208ENST00000427187 MED14O60244 1454 aa13.93□□□□□ -0.18
VNN3-208ENST00000427187 CFAP65Q6ZU64 1925 aaKnown RBP13.92□□□□□ -0.18
VNN3-208ENST00000427187 ARHGEF5Q12774 1597 aa13.92□□□□□ -0.18
VNN3-208ENST00000427187 ABCC3O15438 1527 aa13.91□□□□□ -0.18
VNN3-208ENST00000427187 LRRC7Q96NW7 1537 aa13.91□□□□□ -0.18
VNN3-208ENST00000427187 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.18
VNN3-208ENST00000427187 CEP152O94986 1710 aa13.9□□□□□ -0.18
VNN3-208ENST00000427187 TSPY4P0CV99 314 aa13.89□□□□□ -0.19
VNN3-208ENST00000427187 TSPY10P0CW01 314 aa13.89□□□□□ -0.19
VNN3-208ENST00000427187 RSPH4AQ5TD94 716 aa13.89□□□□□ -0.19
VNN3-208ENST00000427187 ZC3H13Q5T200 1668 aaKnown RBP13.88□□□□□ -0.19
VNN3-208ENST00000427187 ERVK-7P63135 1459 aa13.88□□□□□ -0.19
VNN3-208ENST00000427187 MROH1Q8NDA8 1641 aa13.88□□□□□ -0.19
VNN3-208ENST00000427187 SYNMO15061 1565 aa13.88□□□□□ -0.19
VNN3-208ENST00000427187 UBR1Q8IWV7 1749 aa13.87□□□□□ -0.19
VNN3-208ENST00000427187 MAST1Q9Y2H9 1570 aa13.85□□□□□ -0.19
VNN3-208ENST00000427187 EIF2AK4Q9P2K8 1649 aaKnown RBP13.85□□□□□ -0.19
VNN3-208ENST00000427187 XIRP1Q702N8 1843 aaKnown RBP13.84□□□□□ -0.19
VNN3-208ENST00000427187 SCAF11Q99590 1463 aaKnown RBP13.84□□□□□ -0.19
VNN3-208ENST00000427187 LRRC9Q6ZRR7 1453 aa13.83□□□□□ -0.2
VNN3-208ENST00000427187 LTKP29376 864 aa13.83□□□□□ -0.2
VNN3-208ENST00000427187 KANK4Q5T7N3 995 aaPredicted RBP13.81□□□□□ -0.2
VNN3-208ENST00000427187 RGS17Q9UGC6 210 aaPredicted RBP13.81□□□□□ -0.2
VNN3-208ENST00000427187 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
VNN3-208ENST00000427187 ARHGAP23Q9P227 1491 aa13.79□□□□□ -0.2
VNN3-208ENST00000427187 SLIT1O75093 1534 aa13.79□□□□□ -0.2
VNN3-208ENST00000427187 DUOX2Q9NRD8 1548 aa13.79□□□□□ -0.2
VNN3-208ENST00000427187 PIK3C2BO00750 1634 aa13.79□□□□□ -0.2
VNN3-208ENST00000427187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.2
VNN3-208ENST00000427187 VPS8Q8N3P4 1428 aa13.78□□□□□ -0.2
VNN3-208ENST00000427187 PRDM15P57071 1507 aaPredicted RBP13.77□□□□□ -0.21
VNN3-208ENST00000427187 MYOM3Q5VTT5 1437 aa13.77□□□□□ -0.21
VNN3-208ENST00000427187 RBM33Q96EV2 1170 aaKnown RBP13.77□□□□□ -0.21
VNN3-208ENST00000427187 KIF15Q9NS87 1388 aa13.76□□□□□ -0.21
VNN3-208ENST00000427187 RRP7BPQ9NSQ0 103 aa13.76□□□□□ -0.21
VNN3-208ENST00000427187 CROCC2H7BZ55 1655 aa13.75□□□□□ -0.21
VNN3-208ENST00000427187 EID1Q9Y6B2 187 aa13.75□□□□□ -0.21
VNN3-208ENST00000427187 TMEM94Q12767 1356 aa13.74□□□□□ -0.21
VNN3-208ENST00000427187 LOC105371045A0A1W2PR82 267 aa13.74□□□□□ -0.21
VNN3-208ENST00000427187 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
VNN3-208ENST00000427187 ARHGAP31Q2M1Z3 1444 aa13.73□□□□□ -0.21
VNN3-208ENST00000427187 TMEM2Q9UHN6 1383 aa13.73□□□□□ -0.21
VNN3-208ENST00000427187 ABCC5O15440 1437 aa13.73□□□□□ -0.21
VNN3-208ENST00000427187 ERBINQ96RT1 1412 aa13.73□□□□□ -0.21
VNN3-208ENST00000427187 ROBO1Q9Y6N7 1651 aa13.72□□□□□ -0.21
VNN3-208ENST00000427187 POTEAQ6S8J7 498 aa13.72□□□□□ -0.21
VNN3-208ENST00000427187 SLC26A8Q96RN1 970 aa13.72□□□□□ -0.21
VNN3-208ENST00000427187 MAP3K1Q13233 1512 aa13.71□□□□□ -0.21
VNN3-208ENST00000427187 EFCAB6Q5THR3 1501 aa13.71□□□□□ -0.21
VNN3-208ENST00000427187 FAM135BQ49AJ0 1406 aa13.71□□□□□ -0.22
VNN3-208ENST00000427187 PTPN23Q9H3S7 1636 aa13.71□□□□□ -0.22
VNN3-208ENST00000427187 IDI1Q13907 227 aa13.7□□□□□ -0.22
VNN3-208ENST00000427187 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
VNN3-208ENST00000427187 PROSER2Q86WR7 435 aaPredicted RBP13.69□□□□□ -0.22
VNN3-208ENST00000427187 CHIC2Q9UKJ5 165 aa13.69□□□□□ -0.22
VNN3-208ENST00000427187 DAPK1P53355 1430 aa13.69□□□□□ -0.22
VNN3-208ENST00000427187 KCNA6P17658 529 aa13.68□□□□□ -0.22
VNN3-208ENST00000427187 TET3O43151 1660 aa13.68□□□□□ -0.22
VNN3-208ENST00000427187 KANK1Q14678 1352 aa13.68□□□□□ -0.22
VNN3-208ENST00000427187 BCANQ96GW7 911 aa13.66□□□□□ -0.22
VNN3-208ENST00000427187 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
VNN3-208ENST00000427187 ADGRB3O60242 1522 aa13.65□□□□□ -0.22
VNN3-208ENST00000427187 PHLPP1O60346 1717 aa13.65□□□□□ -0.22
VNN3-208ENST00000427187 NWD1Q149M9 1564 aa13.65□□□□□ -0.22
VNN3-208ENST00000427187 LMTK2Q8IWU2 1503 aa13.64□□□□□ -0.23
VNN3-208ENST00000427187 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
VNN3-208ENST00000427187 NOS1P29475 1434 aa13.63□□□□□ -0.23
VNN3-208ENST00000427187 FGD6Q6ZV73 1430 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms