RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 ANKRD30AQ9BXX3 1397 aa16.31■□□□□ 0.2
SYNC-204ENST00000426909 CEBPAP49715 358 aaPredicted RBP16.31■□□□□ 0.2
SYNC-204ENST00000426909 C3P01024 1663 aa16.3■□□□□ 0.2
SYNC-204ENST00000426909 FAM135AQ9P2D6 1515 aa16.3■□□□□ 0.2
SYNC-204ENST00000426909 CLSPNQ9HAW4 1339 aa16.3■□□□□ 0.2
SYNC-204ENST00000426909 CLTCQ00610 1675 aaKnown RBP16.3■□□□□ 0.2
SYNC-204ENST00000426909 RRP7BPQ9NSQ0 103 aa16.29■□□□□ 0.2
SYNC-204ENST00000426909 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
SYNC-204ENST00000426909 LMTK3Q96Q04 1460 aa16.29■□□□□ 0.2
SYNC-204ENST00000426909 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
SYNC-204ENST00000426909 ZMYM3Q14202 1370 aa16.28■□□□□ 0.2
SYNC-204ENST00000426909 KDM5DQ9BY66 1539 aa16.28■□□□□ 0.2
SYNC-204ENST00000426909 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.2
SYNC-204ENST00000426909 RNF17Q9BXT8 1623 aaKnown RBP16.27■□□□□ 0.2
SYNC-204ENST00000426909 ADGRL2O95490 1459 aa16.27■□□□□ 0.19
SYNC-204ENST00000426909 NCOA1Q15788 1441 aa16.27■□□□□ 0.19
SYNC-204ENST00000426909 WASHC2CQ9Y4E1 1318 aa16.26■□□□□ 0.19
SYNC-204ENST00000426909 NPATQ14207 1427 aa16.26■□□□□ 0.19
SYNC-204ENST00000426909 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
SYNC-204ENST00000426909 ZC3H13Q5T200 1668 aaKnown RBP16.23■□□□□ 0.19
SYNC-204ENST00000426909 PTPRKQ15262 1439 aa16.2■□□□□ 0.18
SYNC-204ENST00000426909 PRDM15P57071 1507 aaPredicted RBP16.2■□□□□ 0.18
SYNC-204ENST00000426909 MROH1Q8NDA8 1641 aa16.2■□□□□ 0.18
SYNC-204ENST00000426909 ROCK1Q13464 1354 aa16.2■□□□□ 0.18
SYNC-204ENST00000426909 ABCC3O15438 1527 aa16.19■□□□□ 0.18
SYNC-204ENST00000426909 SETD1BQ9UPS6 1966 aaKnown RBP16.19■□□□□ 0.18
SYNC-204ENST00000426909 PZPP20742 1482 aa16.19■□□□□ 0.18
SYNC-204ENST00000426909 KANK1Q14678 1352 aa16.19■□□□□ 0.18
SYNC-204ENST00000426909 ITGAEP38570 1179 aa16.19■□□□□ 0.18
SYNC-204ENST00000426909 DEPDC5O75140 1603 aa16.19■□□□□ 0.18
SYNC-204ENST00000426909 HSPA2P54652 639 aa16.18■□□□□ 0.18
SYNC-204ENST00000426909 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
SYNC-204ENST00000426909 DHX57Q6P158 1386 aaKnown RBP16.17■□□□□ 0.18
SYNC-204ENST00000426909 SETD5Q9C0A6 1442 aa16.17■□□□□ 0.18
SYNC-204ENST00000426909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
SYNC-204ENST00000426909 MYO3AQ8NEV4 1616 aa16.15■□□□□ 0.18
SYNC-204ENST00000426909 CAMSAP1Q5T5Y3 1602 aa16.14■□□□□ 0.17
SYNC-204ENST00000426909 CEP152O94986 1710 aa16.14■□□□□ 0.17
SYNC-204ENST00000426909 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
SYNC-204ENST00000426909 TNRQ92752 1358 aa16.13■□□□□ 0.17
SYNC-204ENST00000426909 ZNF142P52746 1687 aaPredicted RBP16.12■□□□□ 0.17
SYNC-204ENST00000426909 FBXO31Q5XUX0 539 aaPredicted RBP16.12■□□□□ 0.17
SYNC-204ENST00000426909 CEP170BQ9Y4F5 1589 aaPredicted RBP16.12■□□□□ 0.17
SYNC-204ENST00000426909 ARHGAP31Q2M1Z3 1444 aa16.11■□□□□ 0.17
SYNC-204ENST00000426909 LMTK2Q8IWU2 1503 aa16.11■□□□□ 0.17
SYNC-204ENST00000426909 VWDEQ8N2E2 1590 aa16.11■□□□□ 0.17
SYNC-204ENST00000426909 A2ML1A8K2U0 1454 aa16.1■□□□□ 0.17
SYNC-204ENST00000426909 SPATA31D1Q6ZQQ2 1576 aa16.09■□□□□ 0.17
SYNC-204ENST00000426909 ERVK-7P63135 1459 aa16.09■□□□□ 0.17
SYNC-204ENST00000426909 NLRP1Q9C000 1473 aa16.09■□□□□ 0.17
SYNC-204ENST00000426909 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
SYNC-204ENST00000426909 UNC13BO14795 1591 aa16.08■□□□□ 0.16
SYNC-204ENST00000426909 HFM1A2PYH4 1435 aa16.07■□□□□ 0.16
SYNC-204ENST00000426909 EFCAB6Q5THR3 1501 aa16.06■□□□□ 0.16
SYNC-204ENST00000426909 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
SYNC-204ENST00000426909 PLA2R1Q13018 1463 aa16.04■□□□□ 0.16
SYNC-204ENST00000426909 STRCQ7RTU9 1775 aa16.03■□□□□ 0.16
SYNC-204ENST00000426909 GCC2Q8IWJ2 1684 aa16.03■□□□□ 0.16
SYNC-204ENST00000426909 UGGT1Q9NYU2 1555 aa16.03■□□□□ 0.16
SYNC-204ENST00000426909 RPRD2Q5VT52 1461 aaKnown RBP16.03■□□□□ 0.16
SYNC-204ENST00000426909 NAIPQ13075 1403 aa16.02■□□□□ 0.16
SYNC-204ENST00000426909 TET3O43151 1660 aa16.02■□□□□ 0.16
SYNC-204ENST00000426909 THEMISQ8N1K5 641 aaPredicted RBP16.02■□□□□ 0.16
SYNC-204ENST00000426909 NUP155O75694 1391 aa16.01■□□□□ 0.15
SYNC-204ENST00000426909 IQGAP3Q86VI3 1631 aa16.01■□□□□ 0.15
SYNC-204ENST00000426909 PKD2Q13563 968 aa16.01■□□□□ 0.15
SYNC-204ENST00000426909 PTPRTO14522 1441 aa16■□□□□ 0.15
SYNC-204ENST00000426909 NOS1P29475 1434 aa15.97■□□□□ 0.15
SYNC-204ENST00000426909 NCKAP5LQ9HCH0 1330 aa15.96■□□□□ 0.15
SYNC-204ENST00000426909 CFAP65Q6ZU64 1925 aaKnown RBP15.96■□□□□ 0.15
SYNC-204ENST00000426909 TIMELESSQ9UNS1 1208 aa15.96■□□□□ 0.15
SYNC-204ENST00000426909 SYNMO15061 1565 aa15.96■□□□□ 0.14
SYNC-204ENST00000426909 UBR1Q8IWV7 1749 aa15.95■□□□□ 0.14
SYNC-204ENST00000426909 ANKLE2Q86XL3 938 aa15.95■□□□□ 0.14
SYNC-204ENST00000426909 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
SYNC-204ENST00000426909 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
SYNC-204ENST00000426909 POLR1AO95602 1720 aaPredicted RBP15.94■□□□□ 0.14
SYNC-204ENST00000426909 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
SYNC-204ENST00000426909 E9PCH4 1651 aa15.94■□□□□ 0.14
SYNC-204ENST00000426909 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
SYNC-204ENST00000426909 KDM5AP29375 1690 aaKnown RBP15.93■□□□□ 0.14
SYNC-204ENST00000426909 IDI1Q13907 227 aa15.92■□□□□ 0.14
SYNC-204ENST00000426909 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
SYNC-204ENST00000426909 ADGRB3O60242 1522 aa15.9■□□□□ 0.14
SYNC-204ENST00000426909 NEURL4Q96JN8 1562 aa15.9■□□□□ 0.14
SYNC-204ENST00000426909 SLIT1O75093 1534 aa15.89■□□□□ 0.13
SYNC-204ENST00000426909 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
SYNC-204ENST00000426909 MED14O60244 1454 aa15.89■□□□□ 0.13
SYNC-204ENST00000426909 ARHGAP23Q9P227 1491 aa15.89■□□□□ 0.13
SYNC-204ENST00000426909 TMEM2Q9UHN6 1383 aa15.87■□□□□ 0.13
SYNC-204ENST00000426909 NPHP4O75161 1426 aaPredicted RBP15.87■□□□□ 0.13
SYNC-204ENST00000426909 SCAF11Q99590 1463 aaKnown RBP15.87■□□□□ 0.13
SYNC-204ENST00000426909 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
SYNC-204ENST00000426909 SPHKAPQ2M3C7 1700 aa15.85■□□□□ 0.13
SYNC-204ENST00000426909 TXNDC2Q86VQ3 553 aa15.85■□□□□ 0.13
SYNC-204ENST00000426909 CERKQ8TCT0 537 aa15.85■□□□□ 0.13
SYNC-204ENST00000426909 IQGAP1P46940 1657 aa15.85■□□□□ 0.13
SYNC-204ENST00000426909 CHGAP10645 457 aaKnown RBP15.83■□□□□ 0.12
SYNC-204ENST00000426909 LTKP29376 864 aa15.83■□□□□ 0.12
SYNC-204ENST00000426909 DIEXFQ68CQ4 756 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms