RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 RNF17Q9BXT8 1623 aaKnown RBP35.85■■■■□ 3.33
PDGFA-205ENST00000426681 MROH2AA6NES4 1674 aa35.84■■■■□ 3.33
PDGFA-205ENST00000426681 FAM135AQ9P2D6 1515 aa35.83■■■■□ 3.33
PDGFA-205ENST00000426681 ROCK1Q13464 1354 aa35.83■■■■□ 3.33
PDGFA-205ENST00000426681 CLTCQ00610 1675 aaKnown RBP35.81■■■■□ 3.32
PDGFA-205ENST00000426681 CEBPAP49715 358 aaPredicted RBP35.81■■■■□ 3.32
PDGFA-205ENST00000426681 C3P01024 1663 aa35.81■■■■□ 3.32
PDGFA-205ENST00000426681 ZMYM3Q14202 1370 aa35.78■■■■□ 3.32
PDGFA-205ENST00000426681 PLPPR3Q6T4P5 718 aa35.78■■■■□ 3.32
PDGFA-205ENST00000426681 ITGAEP38570 1179 aa35.77■■■■□ 3.32
PDGFA-205ENST00000426681 KDM5DQ9BY66 1539 aa35.75■■■■□ 3.31
PDGFA-205ENST00000426681 MROH1Q8NDA8 1641 aa35.75■■■■□ 3.31
PDGFA-205ENST00000426681 WASHC2CQ9Y4E1 1318 aa35.73■■■■□ 3.31
PDGFA-205ENST00000426681 ANKRD50Q9ULJ7 1429 aa35.71■■■■□ 3.31
PDGFA-205ENST00000426681 DEPDC5O75140 1603 aa35.7■■■■□ 3.31
PDGFA-205ENST00000426681 SETD1BQ9UPS6 1966 aaKnown RBP35.7■■■■□ 3.31
PDGFA-205ENST00000426681 PRDM15P57071 1507 aaPredicted RBP35.68■■■■□ 3.3
PDGFA-205ENST00000426681 ZC3H13Q5T200 1668 aaKnown RBP35.67■■■■□ 3.3
PDGFA-205ENST00000426681 NPATQ14207 1427 aa35.66■■■■□ 3.3
PDGFA-205ENST00000426681 ABCC3O15438 1527 aa35.66■■■■□ 3.3
PDGFA-205ENST00000426681 LMTK3Q96Q04 1460 aa35.62■■■■□ 3.29
PDGFA-205ENST00000426681 PREX1Q8TCU6 1659 aa35.61■■■■□ 3.29
PDGFA-205ENST00000426681 PZPP20742 1482 aa35.59■■■■□ 3.29
PDGFA-205ENST00000426681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.58■■■■□ 3.29
PDGFA-205ENST00000426681 KANK1Q14678 1352 aa35.58■■■■□ 3.29
PDGFA-205ENST00000426681 VWDEQ8N2E2 1590 aa35.57■■■■□ 3.28
PDGFA-205ENST00000426681 CEP152O94986 1710 aa35.57■■■■□ 3.28
PDGFA-205ENST00000426681 UHRF1BP1Q6BDS2 1440 aa35.53■■■■□ 3.28
PDGFA-205ENST00000426681 CAMSAP1Q5T5Y3 1602 aa35.53■■■■□ 3.28
PDGFA-205ENST00000426681 LMTK2Q8IWU2 1503 aa35.52■■■■□ 3.28
PDGFA-205ENST00000426681 UNC13BO14795 1591 aa35.5■■■■□ 3.27
PDGFA-205ENST00000426681 NAIPQ13075 1403 aa35.49■■■■□ 3.27
PDGFA-205ENST00000426681 FBXO31Q5XUX0 539 aaPredicted RBP35.49■■■■□ 3.27
PDGFA-205ENST00000426681 ARHGAP31Q2M1Z3 1444 aa35.49■■■■□ 3.27
PDGFA-205ENST00000426681 HFM1A2PYH4 1435 aa35.47■■■■□ 3.27
PDGFA-205ENST00000426681 GCC2Q8IWJ2 1684 aa35.46■■■■□ 3.27
PDGFA-205ENST00000426681 TNRQ92752 1358 aa35.42■■■■□ 3.26
PDGFA-205ENST00000426681 HSPA2P54652 639 aa35.41■■■■□ 3.26
PDGFA-205ENST00000426681 MYO3AQ8NEV4 1616 aa35.41■■■■□ 3.26
PDGFA-205ENST00000426681 SPATA31D1Q6ZQQ2 1576 aa35.41■■■■□ 3.26
PDGFA-205ENST00000426681 ERVK-7P63135 1459 aa35.39■■■■□ 3.26
PDGFA-205ENST00000426681 EFCAB6Q5THR3 1501 aa35.37■■■■□ 3.25
PDGFA-205ENST00000426681 ZNF142P52746 1687 aaPredicted RBP35.37■■■■□ 3.25
PDGFA-205ENST00000426681 IQGAP3Q86VI3 1631 aa35.35■■■■□ 3.25
PDGFA-205ENST00000426681 TET3O43151 1660 aa35.35■■■■□ 3.25
PDGFA-205ENST00000426681 CFAP65Q6ZU64 1925 aaKnown RBP35.35■■■■□ 3.25
PDGFA-205ENST00000426681 NUP155O75694 1391 aa35.35■■■■□ 3.25
PDGFA-205ENST00000426681 CEP170BQ9Y4F5 1589 aaPredicted RBP35.34■■■■□ 3.25
PDGFA-205ENST00000426681 A2ML1A8K2U0 1454 aa35.32■■■■□ 3.24
PDGFA-205ENST00000426681 NLRP1Q9C000 1473 aa35.32■■■■□ 3.24
PDGFA-205ENST00000426681 RPRD2Q5VT52 1461 aaKnown RBP35.3■■■■□ 3.24
PDGFA-205ENST00000426681 NOS1P29475 1434 aa35.23■■■■□ 3.23
PDGFA-205ENST00000426681 E9PCH4 1651 aa35.2■■■■□ 3.23
PDGFA-205ENST00000426681 STRCQ7RTU9 1775 aa35.19■■■■□ 3.22
PDGFA-205ENST00000426681 SYNMO15061 1565 aa35.17■■■■□ 3.22
PDGFA-205ENST00000426681 UGGT1Q9NYU2 1555 aa35.17■■■■□ 3.22
PDGFA-205ENST00000426681 PLA2R1Q13018 1463 aa35.16■■■■□ 3.22
PDGFA-205ENST00000426681 SETD5Q9C0A6 1442 aa35.16■■■■□ 3.22
PDGFA-205ENST00000426681 THEMISQ8N1K5 641 aaPredicted RBP35.14■■■■□ 3.22
PDGFA-205ENST00000426681 TRIM52Q96A61 297 aa35.14■■■■□ 3.22
PDGFA-205ENST00000426681 ACIN1Q9UKV3 1341 aaKnown RBP35.12■■■■□ 3.21
PDGFA-205ENST00000426681 SLC52A1Q9NWF4 448 aa35.11■■■■□ 3.21
PDGFA-205ENST00000426681 IDI1Q13907 227 aa35.09■■■■□ 3.21
PDGFA-205ENST00000426681 DMRT2Q9Y5R5 561 aa35.09■■■■□ 3.21
PDGFA-205ENST00000426681 UBR1Q8IWV7 1749 aa35.09■■■■□ 3.21
PDGFA-205ENST00000426681 PKD2Q13563 968 aa35.08■■■■□ 3.21
PDGFA-205ENST00000426681 PIK3C2BO00750 1634 aa35.07■■■■□ 3.21
PDGFA-205ENST00000426681 KDM5AP29375 1690 aaKnown RBP35.05■■■■□ 3.2
PDGFA-205ENST00000426681 PTPRTO14522 1441 aa35.03■■■■□ 3.2
PDGFA-205ENST00000426681 NCKAP5LQ9HCH0 1330 aa35.03■■■■□ 3.2
PDGFA-205ENST00000426681 SLC4A1APQ9BWU0 796 aaKnown RBP35.02■■■■□ 3.2
PDGFA-205ENST00000426681 RAB3GAP2Q9H2M9 1393 aa35.01■■■■□ 3.2
PDGFA-205ENST00000426681 SPHKAPQ2M3C7 1700 aa34.98■■■■□ 3.19
PDGFA-205ENST00000426681 ANKLE2Q86XL3 938 aa34.98■■■■□ 3.19
PDGFA-205ENST00000426681 STAG3Q9UJ98 1225 aa34.97■■■■□ 3.19
PDGFA-205ENST00000426681 ADGRB3O60242 1522 aa34.96■■■■□ 3.19
PDGFA-205ENST00000426681 POLR1AO95602 1720 aaPredicted RBP34.96■■■■□ 3.19
PDGFA-205ENST00000426681 HRCP23327 699 aa34.96■■■■□ 3.19
PDGFA-205ENST00000426681 ARHGAP23Q9P227 1491 aa34.96■■■■□ 3.19
PDGFA-205ENST00000426681 SLIT1O75093 1534 aa34.96■■■■□ 3.19
PDGFA-205ENST00000426681 MPHOSPH9Q99550 1183 aa34.94■■■■□ 3.18
PDGFA-205ENST00000426681 NEURL4Q96JN8 1562 aa34.91■■■■□ 3.18
PDGFA-205ENST00000426681 TMEM2Q9UHN6 1383 aa34.91■■■■□ 3.18
PDGFA-205ENST00000426681 TMEM131LA2VDJ0 1609 aa34.9■■■■□ 3.18
PDGFA-205ENST00000426681 TRPM2O94759 1503 aa34.9■■■■□ 3.18
PDGFA-205ENST00000426681 MED14O60244 1454 aa34.9■■■■□ 3.18
PDGFA-205ENST00000426681 SCAF11Q99590 1463 aaKnown RBP34.85■■■■□ 3.17
PDGFA-205ENST00000426681 MYO5BQ9ULV0 1848 aa34.84■■■■□ 3.17
PDGFA-205ENST00000426681 TXNDC2Q86VQ3 553 aa34.84■■■■□ 3.17
PDGFA-205ENST00000426681 LTKP29376 864 aa34.83■■■■□ 3.17
PDGFA-205ENST00000426681 EID1Q9Y6B2 187 aa34.83■■■■□ 3.17
PDGFA-205ENST00000426681 NPHP4O75161 1426 aaPredicted RBP34.82■■■■□ 3.17
PDGFA-205ENST00000426681 CLTCL1P53675 1640 aa34.81■■■■□ 3.16
PDGFA-205ENST00000426681 FOXD1Q16676 465 aa34.8■■■■□ 3.16
PDGFA-205ENST00000426681 CHGAP10645 457 aaKnown RBP34.78■■■■□ 3.16
PDGFA-205ENST00000426681 IQGAP1P46940 1657 aa34.77■■■■□ 3.16
PDGFA-205ENST00000426681 TRIM26Q12899 539 aaPredicted RBP34.77■■■■□ 3.16
PDGFA-205ENST00000426681 ZFYVE9O95405 1425 aa34.77■■■■□ 3.16
PDGFA-205ENST00000426681 HDGFP51858 240 aaKnown RBP34.74■■■■□ 3.15
PDGFA-205ENST00000426681 RIMS2Q9UQ26 1411 aa34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms