RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 PPP6R1Q9UPN7 881 aa33.11■■■□□ 2.89
HMGA2-205ENST00000425208 CNTLNQ9NXG0 1405 aa33.11■■■□□ 2.89
HMGA2-205ENST00000425208 PTPRMP28827 1452 aa33.1■■■□□ 2.89
HMGA2-205ENST00000425208 FAM135AQ9P2D6 1515 aa33.1■■■□□ 2.89
HMGA2-205ENST00000425208 DEPDC5O75140 1603 aa33.1■■■□□ 2.89
HMGA2-205ENST00000425208 GCC2Q8IWJ2 1684 aa33.1■■■□□ 2.89
HMGA2-205ENST00000425208 MROH1Q8NDA8 1641 aa33.09■■■□□ 2.89
HMGA2-205ENST00000425208 CLTCQ00610 1675 aaKnown RBP33.09■■■□□ 2.89
HMGA2-205ENST00000425208 PRDM15P57071 1507 aaPredicted RBP33.07■■■□□ 2.88
HMGA2-205ENST00000425208 KDM5DQ9BY66 1539 aa33.07■■■□□ 2.88
HMGA2-205ENST00000425208 MROH2AA6NES4 1674 aa33.06■■■□□ 2.88
HMGA2-205ENST00000425208 HFM1A2PYH4 1435 aa33.05■■■□□ 2.88
HMGA2-205ENST00000425208 NAIPQ13075 1403 aa33.05■■■□□ 2.88
HMGA2-205ENST00000425208 ZC3H13Q5T200 1668 aaKnown RBP33.04■■■□□ 2.88
HMGA2-205ENST00000425208 WASHC2CQ9Y4E1 1318 aa33.01■■■□□ 2.87
HMGA2-205ENST00000425208 AEBP2Q6ZN18 517 aaPredicted RBP33.01■■■□□ 2.87
HMGA2-205ENST00000425208 C3P01024 1663 aa32.99■■■□□ 2.87
HMGA2-205ENST00000425208 ABCC3O15438 1527 aa32.99■■■□□ 2.87
HMGA2-205ENST00000425208 KANK1Q14678 1352 aa32.99■■■□□ 2.87
HMGA2-205ENST00000425208 UNC13BO14795 1591 aa32.98■■■□□ 2.87
HMGA2-205ENST00000425208 CEP152O94986 1710 aa32.97■■■□□ 2.87
HMGA2-205ENST00000425208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.97■■■□□ 2.874e-9■□□□□ 8.3
HMGA2-205ENST00000425208 ZMYM3Q14202 1370 aa32.95■■■□□ 2.86
HMGA2-205ENST00000425208 PLPPR3Q6T4P5 718 aa32.94■■■□□ 2.86
HMGA2-205ENST00000425208 VWDEQ8N2E2 1590 aa32.93■■■□□ 2.86
HMGA2-205ENST00000425208 CEBPAP49715 358 aaPredicted RBP32.91■■■□□ 2.86
HMGA2-205ENST00000425208 CAMSAP1Q5T5Y3 1602 aa32.9■■■□□ 2.86
HMGA2-205ENST00000425208 LMTK2Q8IWU2 1503 aa32.88■■■□□ 2.85
HMGA2-205ENST00000425208 IQGAP3Q86VI3 1631 aa32.85■■■□□ 2.85
HMGA2-205ENST00000425208 PZPP20742 1482 aa32.85■■■□□ 2.85
HMGA2-205ENST00000425208 NUP155O75694 1391 aa32.83■■■□□ 2.85
HMGA2-205ENST00000425208 SETD5Q9C0A6 1442 aa32.82■■■□□ 2.84
HMGA2-205ENST00000425208 NPATQ14207 1427 aa32.81■■■□□ 2.84
HMGA2-205ENST00000425208 TET3O43151 1660 aa32.81■■■□□ 2.84
HMGA2-205ENST00000425208 EFCAB6Q5THR3 1501 aa32.8■■■□□ 2.84
HMGA2-205ENST00000425208 SETD1BQ9UPS6 1966 aaKnown RBP32.8■■■□□ 2.84
HMGA2-205ENST00000425208 ARHGAP31Q2M1Z3 1444 aa32.79■■■□□ 2.84
HMGA2-205ENST00000425208 TRIM26Q12899 539 aaPredicted RBP32.77■■■□□ 2.84
HMGA2-205ENST00000425208 PREX1Q8TCU6 1659 aa32.75■■■□□ 2.83
HMGA2-205ENST00000425208 CFAP65Q6ZU64 1925 aaKnown RBP32.74■■■□□ 2.83
HMGA2-205ENST00000425208 TRIM52Q96A61 297 aa32.73■■■□□ 2.83
HMGA2-205ENST00000425208 RAB3GAP2Q9H2M9 1393 aa32.72■■■□□ 2.83
HMGA2-205ENST00000425208 FBXO31Q5XUX0 539 aaPredicted RBP32.7■■■□□ 2.83
HMGA2-205ENST00000425208 SPATA31D1Q6ZQQ2 1576 aa32.7■■■□□ 2.83
HMGA2-205ENST00000425208 ERVK-7P63135 1459 aa32.7■■■□□ 2.83
HMGA2-205ENST00000425208 RPRD2Q5VT52 1461 aaKnown RBP32.7■■■□□ 2.83
HMGA2-205ENST00000425208 ACIN1Q9UKV3 1341 aaKnown RBP32.7■■■□□ 2.83
HMGA2-205ENST00000425208 MYO3AQ8NEV4 1616 aa32.67■■■□□ 2.82
HMGA2-205ENST00000425208 TNRQ92752 1358 aa32.67■■■□□ 2.82
HMGA2-205ENST00000425208 E9PCH4 1651 aa32.67■■■□□ 2.82
HMGA2-205ENST00000425208 UHRF1BP1Q6BDS2 1440 aa32.67■■■□□ 2.82
HMGA2-205ENST00000425208 LMTK3Q96Q04 1460 aa32.63■■■□□ 2.81
HMGA2-205ENST00000425208 ZNF142P52746 1687 aaPredicted RBP32.6■■■□□ 2.81
HMGA2-205ENST00000425208 SLC4A1APQ9BWU0 796 aaKnown RBP32.59■■■□□ 2.81
HMGA2-205ENST00000425208 HRCP23327 699 aa32.58■■■□□ 2.81
HMGA2-205ENST00000425208 NLRP1Q9C000 1473 aa32.58■■■□□ 2.81
HMGA2-205ENST00000425208 NOS1P29475 1434 aa32.57■■■□□ 2.81
HMGA2-205ENST00000425208 CEP170BQ9Y4F5 1589 aaPredicted RBP32.57■■■□□ 2.8
HMGA2-205ENST00000425208 SYNMO15061 1565 aa32.55■■■□□ 2.8
HMGA2-205ENST00000425208 A2ML1A8K2U0 1454 aa32.53■■■□□ 2.8
HMGA2-205ENST00000425208 SPHKAPQ2M3C7 1700 aa32.52■■■□□ 2.8
HMGA2-205ENST00000425208 PKD2Q13563 968 aa32.51■■■□□ 2.79
HMGA2-205ENST00000425208 MPHOSPH9Q99550 1183 aa32.5■■■□□ 2.79
HMGA2-205ENST00000425208 UGGT1Q9NYU2 1555 aa32.46■■■□□ 2.79
HMGA2-205ENST00000425208 PTPRTO14522 1441 aa32.45■■■□□ 2.78
HMGA2-205ENST00000425208 HSPA2P54652 639 aa32.44■■■□□ 2.78
HMGA2-205ENST00000425208 SLC52A1Q9NWF4 448 aa32.44■■■□□ 2.78
HMGA2-205ENST00000425208 PIK3C2BO00750 1634 aa32.43■■■□□ 2.78
HMGA2-205ENST00000425208 TRPM2O94759 1503 aa32.42■■■□□ 2.78
HMGA2-205ENST00000425208 UBR1Q8IWV7 1749 aa32.41■■■□□ 2.78
HMGA2-205ENST00000425208 IDI1Q13907 227 aa32.4■■■□□ 2.78
HMGA2-205ENST00000425208 KDM5AP29375 1690 aaKnown RBP32.39■■■□□ 2.78
HMGA2-205ENST00000425208 FOXD1Q16676 465 aa32.37■■■□□ 2.77
HMGA2-205ENST00000425208 ADGRB3O60242 1522 aa32.36■■■□□ 2.77
HMGA2-205ENST00000425208 THEMISQ8N1K5 641 aaPredicted RBP32.35■■■□□ 2.77
HMGA2-205ENST00000425208 STAG3Q9UJ98 1225 aa32.35■■■□□ 2.77
HMGA2-205ENST00000425208 PCGF6Q9BYE7 350 aa32.34■■■□□ 2.77
HMGA2-205ENST00000425208 PLA2R1Q13018 1463 aa32.34■■■□□ 2.77
HMGA2-205ENST00000425208 CLTCL1P53675 1640 aa32.33■■■□□ 2.77
HMGA2-205ENST00000425208 TMEM131LA2VDJ0 1609 aa32.29■■■□□ 2.76
HMGA2-205ENST00000425208 MYO5BQ9ULV0 1848 aa32.29■■■□□ 2.76
HMGA2-205ENST00000425208 STRCQ7RTU9 1775 aa32.27■■■□□ 2.76
HMGA2-205ENST00000425208 KIF1BO60333 1816 aa32.26■■■□□ 2.75
HMGA2-205ENST00000425208 CCDC144AA2RUR9 1427 aa32.25■■■□□ 2.75
HMGA2-205ENST00000425208 POLR1AO95602 1720 aaPredicted RBP32.25■■■□□ 2.75
HMGA2-205ENST00000425208 CHGAP10645 457 aaKnown RBP32.25■■■□□ 2.75
HMGA2-205ENST00000425208 SLIT1O75093 1534 aa32.23■■■□□ 2.75
HMGA2-205ENST00000425208 ARHGAP23Q9P227 1491 aa32.22■■■□□ 2.75
HMGA2-205ENST00000425208 TMEM2Q9UHN6 1383 aa32.21■■■□□ 2.75
HMGA2-205ENST00000425208 ANKLE2Q86XL3 938 aa32.18■■■□□ 2.74
HMGA2-205ENST00000425208 ANKRD30BQ9BXX2 1392 aa32.18■■■□□ 2.74
HMGA2-205ENST00000425208 NCKAP5LQ9HCH0 1330 aa32.17■■■□□ 2.74
HMGA2-205ENST00000425208 SCAF11Q99590 1463 aaKnown RBP32.14■■■□□ 2.74
HMGA2-205ENST00000425208 EID1Q9Y6B2 187 aa32.14■■■□□ 2.74
HMGA2-205ENST00000425208 NEURL4Q96JN8 1562 aa32.14■■■□□ 2.74
HMGA2-205ENST00000425208 DMRT2Q9Y5R5 561 aa32.13■■■□□ 2.73
HMGA2-205ENST00000425208 DHX57Q6P158 1386 aaKnown RBP32.12■■■□□ 2.73
HMGA2-205ENST00000425208 ZFYVE9O95405 1425 aa32.11■■■□□ 2.73
HMGA2-205ENST00000425208 RIMS2Q9UQ26 1411 aa32.11■■■□□ 2.73
HMGA2-205ENST00000425208 ZNF326Q5BKZ1 582 aaKnown RBP32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms