RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CHIC2Q9UKJ5 165 aa34.36■■■■□ 3.09
PTCHD3P2-201ENST00000424937 FAM135AQ9P2D6 1515 aa34.35■■■■□ 3.09
PTCHD3P2-201ENST00000424937 PPP6R1Q9UPN7 881 aa34.34■■■■□ 3.09
PTCHD3P2-201ENST00000424937 ZMYM3Q14202 1370 aa34.34■■■■□ 3.09
PTCHD3P2-201ENST00000424937 ANKRD30AQ9BXX3 1397 aa34.34■■■■□ 3.09
PTCHD3P2-201ENST00000424937 RRP7BPQ9NSQ0 103 aa34.33■■■■□ 3.09
PTCHD3P2-201ENST00000424937 ADGRL2O95490 1459 aa34.32■■■■□ 3.08
PTCHD3P2-201ENST00000424937 ERBINQ96RT1 1412 aa34.31■■■■□ 3.08
PTCHD3P2-201ENST00000424937 MROH1Q8NDA8 1641 aa34.3■■■■□ 3.08
PTCHD3P2-201ENST00000424937 ZC3H13Q5T200 1668 aaKnown RBP34.3■■■■□ 3.08
PTCHD3P2-201ENST00000424937 NCOA1Q15788 1441 aa34.27■■■■□ 3.08
PTCHD3P2-201ENST00000424937 UHRF1BP1Q6BDS2 1440 aa34.27■■■■□ 3.08
PTCHD3P2-201ENST00000424937 CEP152O94986 1710 aa34.27■■■■□ 3.08
PTCHD3P2-201ENST00000424937 NPATQ14207 1427 aa34.25■■■■□ 3.07
PTCHD3P2-201ENST00000424937 DEPDC5O75140 1603 aa34.23■■■■□ 3.07
PTCHD3P2-201ENST00000424937 WASHC2CQ9Y4E1 1318 aa34.23■■■■□ 3.07
PTCHD3P2-201ENST00000424937 PTPRKQ15262 1439 aa34.22■■■■□ 3.07
PTCHD3P2-201ENST00000424937 ABCC3O15438 1527 aa34.22■■■■□ 3.07
PTCHD3P2-201ENST00000424937 PRDM15P57071 1507 aaPredicted RBP34.22■■■■□ 3.07
PTCHD3P2-201ENST00000424937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.22■■■■□ 3.07
PTCHD3P2-201ENST00000424937 MYO3AQ8NEV4 1616 aa34.2■■■■□ 3.07
PTCHD3P2-201ENST00000424937 HSPA2P54652 639 aa34.2■■■■□ 3.07
PTCHD3P2-201ENST00000424937 RRBP1Q9P2E9 1410 aaKnown RBP34.19■■■■□ 3.06
PTCHD3P2-201ENST00000424937 CAMSAP1Q5T5Y3 1602 aa34.17■■■■□ 3.06
PTCHD3P2-201ENST00000424937 PZPP20742 1482 aa34.16■■■■□ 3.06
PTCHD3P2-201ENST00000424937 ITGAEP38570 1179 aa34.14■■■■□ 3.06
PTCHD3P2-201ENST00000424937 ZNF142P52746 1687 aaPredicted RBP34.14■■■■□ 3.06
PTCHD3P2-201ENST00000424937 ANKRD50Q9ULJ7 1429 aa34.11■■■■□ 3.05
PTCHD3P2-201ENST00000424937 CFAP65Q6ZU64 1925 aaKnown RBP34.1■■■■□ 3.05
PTCHD3P2-201ENST00000424937 ROCK1Q13464 1354 aa34.1■■■■□ 3.05
PTCHD3P2-201ENST00000424937 CEP170BQ9Y4F5 1589 aaPredicted RBP34.07■■■■□ 3.05
PTCHD3P2-201ENST00000424937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.07■■■■□ 3.04
PTCHD3P2-201ENST00000424937 KANK1Q14678 1352 aa34.05■■■■□ 3.04
PTCHD3P2-201ENST00000424937 FBXO31Q5XUX0 539 aaPredicted RBP34.04■■■■□ 3.04
PTCHD3P2-201ENST00000424937 STRCQ7RTU9 1775 aa34.03■■■■□ 3.04
PTCHD3P2-201ENST00000424937 VWDEQ8N2E2 1590 aa34.03■■■■□ 3.04
PTCHD3P2-201ENST00000424937 TNRQ92752 1358 aa34.03■■■■□ 3.04
PTCHD3P2-201ENST00000424937 UNC13BO14795 1591 aa34■■■■□ 3.03
PTCHD3P2-201ENST00000424937 SPATA31D1Q6ZQQ2 1576 aa33.99■■■■□ 3.03
PTCHD3P2-201ENST00000424937 LMTK2Q8IWU2 1503 aa33.98■■■■□ 3.03
PTCHD3P2-201ENST00000424937 ERVK-7P63135 1459 aa33.97■■■■□ 3.03
PTCHD3P2-201ENST00000424937 A2ML1A8K2U0 1454 aa33.96■■■■□ 3.03
PTCHD3P2-201ENST00000424937 ARHGAP31Q2M1Z3 1444 aa33.94■■■■□ 3.02
PTCHD3P2-201ENST00000424937 GCC2Q8IWJ2 1684 aa33.93■■■■□ 3.02
PTCHD3P2-201ENST00000424937 EFCAB6Q5THR3 1501 aa33.93■■■■□ 3.02
PTCHD3P2-201ENST00000424937 NLRP1Q9C000 1473 aa33.9■■■■□ 3.02
PTCHD3P2-201ENST00000424937 TET3O43151 1660 aa33.9■■■■□ 3.02
PTCHD3P2-201ENST00000424937 IQGAP3Q86VI3 1631 aa33.86■■■■□ 3.01
PTCHD3P2-201ENST00000424937 PLA2R1Q13018 1463 aa33.84■■■■□ 3.01
PTCHD3P2-201ENST00000424937 UGGT1Q9NYU2 1555 aa33.83■■■■□ 3.01
PTCHD3P2-201ENST00000424937 POLR1AO95602 1720 aaPredicted RBP33.82■■■■□ 3
PTCHD3P2-201ENST00000424937 NAIPQ13075 1403 aa33.8■■■■□ 3
PTCHD3P2-201ENST00000424937 UBR1Q8IWV7 1749 aa33.78■■■■□ 3
PTCHD3P2-201ENST00000424937 E9PCH4 1651 aa33.77■■■■□ 3
PTCHD3P2-201ENST00000424937 SYNMO15061 1565 aa33.77■■■■□ 3
PTCHD3P2-201ENST00000424937 DMRT2Q9Y5R5 561 aa33.76■■■□□ 2.99
PTCHD3P2-201ENST00000424937 RPRD2Q5VT52 1461 aaKnown RBP33.76■■■□□ 2.99
PTCHD3P2-201ENST00000424937 HFM1A2PYH4 1435 aa33.75■■■□□ 2.99
PTCHD3P2-201ENST00000424937 PIK3C2BO00750 1634 aa33.75■■■□□ 2.99
PTCHD3P2-201ENST00000424937 PTPRTO14522 1441 aa33.74■■■□□ 2.99
PTCHD3P2-201ENST00000424937 NCKAP5LQ9HCH0 1330 aa33.74■■■□□ 2.99
PTCHD3P2-201ENST00000424937 NUP155O75694 1391 aa33.73■■■□□ 2.99
PTCHD3P2-201ENST00000424937 NOS1P29475 1434 aa33.7■■■□□ 2.99
PTCHD3P2-201ENST00000424937 PKD2Q13563 968 aa33.68■■■□□ 2.98
PTCHD3P2-201ENST00000424937 THEMISQ8N1K5 641 aaPredicted RBP33.68■■■□□ 2.98
PTCHD3P2-201ENST00000424937 NEURL4Q96JN8 1562 aa33.67■■■□□ 2.98
PTCHD3P2-201ENST00000424937 KDM5AP29375 1690 aaKnown RBP33.65■■■□□ 2.98
PTCHD3P2-201ENST00000424937 ADGRB3O60242 1522 aa33.6■■■□□ 2.97
PTCHD3P2-201ENST00000424937 MYO5BQ9ULV0 1848 aa33.59■■■□□ 2.97
PTCHD3P2-201ENST00000424937 SPHKAPQ2M3C7 1700 aa33.59■■■□□ 2.97
PTCHD3P2-201ENST00000424937 ANKLE2Q86XL3 938 aa33.57■■■□□ 2.96
PTCHD3P2-201ENST00000424937 IQGAP1P46940 1657 aa33.56■■■□□ 2.96
PTCHD3P2-201ENST00000424937 IDI1Q13907 227 aa33.56■■■□□ 2.96
PTCHD3P2-201ENST00000424937 SLIT1O75093 1534 aa33.55■■■□□ 2.96
PTCHD3P2-201ENST00000424937 STAG3Q9UJ98 1225 aa33.55■■■□□ 2.96
PTCHD3P2-201ENST00000424937 ARHGAP23Q9P227 1491 aa33.53■■■□□ 2.96
PTCHD3P2-201ENST00000424937 SLC52A1Q9NWF4 448 aa33.53■■■□□ 2.96
PTCHD3P2-201ENST00000424937 MED14O60244 1454 aa33.51■■■□□ 2.96
PTCHD3P2-201ENST00000424937 TRIM52Q96A61 297 aa33.51■■■□□ 2.95
PTCHD3P2-201ENST00000424937 NPHP4O75161 1426 aaPredicted RBP33.5■■■□□ 2.95
PTCHD3P2-201ENST00000424937 SCAF11Q99590 1463 aaKnown RBP33.5■■■□□ 2.95
PTCHD3P2-201ENST00000424937 TMEM131LA2VDJ0 1609 aa33.48■■■□□ 2.95
PTCHD3P2-201ENST00000424937 LTBP4Q8N2S1 1624 aa33.47■■■□□ 2.95
PTCHD3P2-201ENST00000424937 TMEM2Q9UHN6 1383 aa33.47■■■□□ 2.95
PTCHD3P2-201ENST00000424937 ZNF335Q9H4Z2 1342 aaPredicted RBP33.43■■■□□ 2.94
PTCHD3P2-201ENST00000424937 CERKQ8TCT0 537 aa33.42■■■□□ 2.94
PTCHD3P2-201ENST00000424937 SETD5Q9C0A6 1442 aa33.4■■■□□ 2.94
PTCHD3P2-201ENST00000424937 LTKP29376 864 aa33.4■■■□□ 2.94
PTCHD3P2-201ENST00000424937 TXNDC2Q86VQ3 553 aa33.4■■■□□ 2.94
PTCHD3P2-201ENST00000424937 EID1Q9Y6B2 187 aa33.4■■■□□ 2.94
PTCHD3P2-201ENST00000424937 TRPM2O94759 1503 aa33.39■■■□□ 2.94
PTCHD3P2-201ENST00000424937 CLTCL1P53675 1640 aa33.38■■■□□ 2.93
PTCHD3P2-201ENST00000424937 CHGAP10645 457 aaKnown RBP33.37■■■□□ 2.93
PTCHD3P2-201ENST00000424937 SLC4A1APQ9BWU0 796 aaKnown RBP33.37■■■□□ 2.93
PTCHD3P2-201ENST00000424937 KIF1BO60333 1816 aa33.33■■■□□ 2.93
PTCHD3P2-201ENST00000424937 ILDR1Q86SU0 546 aaPredicted RBP33.33■■■□□ 2.93
PTCHD3P2-201ENST00000424937 ZFYVE9O95405 1425 aa33.31■■■□□ 2.92
PTCHD3P2-201ENST00000424937 RIMS2Q9UQ26 1411 aa33.3■■■□□ 2.92
PTCHD3P2-201ENST00000424937 RAB3GAP2Q9H2M9 1393 aa33.3■■■□□ 2.92
PTCHD3P2-201ENST00000424937 FBXO41Q8TF61 875 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms