RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ERBINQ96RT1 1412 aa19.88■□□□□ 0.77
PRPF39-202ENST00000424478 MAGI2Q86UL8 1455 aa19.87■□□□□ 0.77
PRPF39-202ENST00000424478 SLC4A1APQ9BWU0 796 aaKnown RBP19.86■□□□□ 0.77
PRPF39-202ENST00000424478 MPHOSPH9Q99550 1183 aa19.85■□□□□ 0.77
PRPF39-202ENST00000424478 PZPP20742 1482 aa19.83■□□□□ 0.77
PRPF39-202ENST00000424478 MROH1Q8NDA8 1641 aa19.82■□□□□ 0.76
PRPF39-202ENST00000424478 PLPPR3Q6T4P5 718 aa19.81■□□□□ 0.76
PRPF39-202ENST00000424478 PKD2Q13563 968 aa19.8■□□□□ 0.76
PRPF39-202ENST00000424478 UNC13BO14795 1591 aa19.79■□□□□ 0.76
PRPF39-202ENST00000424478 HRCP23327 699 aa19.79■□□□□ 0.76
PRPF39-202ENST00000424478 FAM135AQ9P2D6 1515 aa19.79■□□□□ 0.76
PRPF39-202ENST00000424478 CFAP65Q6ZU64 1925 aaKnown RBP19.78■□□□□ 0.76
PRPF39-202ENST00000424478 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
PRPF39-202ENST00000424478 EIF2AK4Q9P2K8 1649 aaKnown RBP19.77■□□□□ 0.76
PRPF39-202ENST00000424478 CEP152O94986 1710 aa19.77■□□□□ 0.76
PRPF39-202ENST00000424478 WASHC2CQ9Y4E1 1318 aa19.77■□□□□ 0.76
PRPF39-202ENST00000424478 DEPDC5O75140 1603 aa19.76■□□□□ 0.75
PRPF39-202ENST00000424478 NEUROD1Q13562 356 aa19.75■□□□□ 0.75
PRPF39-202ENST00000424478 RNF17Q9BXT8 1623 aaKnown RBP19.74■□□□□ 0.75
PRPF39-202ENST00000424478 PRDM15P57071 1507 aaPredicted RBP19.74■□□□□ 0.75
PRPF39-202ENST00000424478 IQGAP3Q86VI3 1631 aa19.72■□□□□ 0.75
PRPF39-202ENST00000424478 KANK1Q14678 1352 aa19.72■□□□□ 0.75
PRPF39-202ENST00000424478 REREQ9P2R6 1566 aa19.72■□□□□ 0.75
PRPF39-202ENST00000424478 KDM5DQ9BY66 1539 aa19.7■□□□□ 0.74
PRPF39-202ENST00000424478 AGLP35573 1532 aa19.69■□□□□ 0.74
PRPF39-202ENST00000424478 ABCC3O15438 1527 aa19.69■□□□□ 0.74
PRPF39-202ENST00000424478 CLTCQ00610 1675 aaKnown RBP19.69■□□□□ 0.74
PRPF39-202ENST00000424478 BCORL1Q5H9F3 1711 aa19.68■□□□□ 0.74
PRPF39-202ENST00000424478 CEBPAP49715 358 aaPredicted RBP19.68■□□□□ 0.74
PRPF39-202ENST00000424478 VWDEQ8N2E2 1590 aa19.68■□□□□ 0.74
PRPF39-202ENST00000424478 E9PCH4 1651 aa19.68■□□□□ 0.74
PRPF39-202ENST00000424478 FBXO31Q5XUX0 539 aaPredicted RBP19.67■□□□□ 0.74
PRPF39-202ENST00000424478 ESF1Q9H501 851 aaKnown RBP19.66■□□□□ 0.74
PRPF39-202ENST00000424478 NPATQ14207 1427 aa19.63■□□□□ 0.73
PRPF39-202ENST00000424478 TET3O43151 1660 aa19.63■□□□□ 0.73
PRPF39-202ENST00000424478 CAMSAP1Q5T5Y3 1602 aa19.63■□□□□ 0.73
PRPF39-202ENST00000424478 UGGT1Q9NYU2 1555 aa19.63■□□□□ 0.73
PRPF39-202ENST00000424478 ANKRD30BQ9BXX2 1392 aa19.62■□□□□ 0.73
PRPF39-202ENST00000424478 EFCAB6Q5THR3 1501 aa19.62■□□□□ 0.73
PRPF39-202ENST00000424478 PLA2R1Q13018 1463 aa19.61■□□□□ 0.73
PRPF39-202ENST00000424478 MADDQ8WXG6 1647 aa19.59■□□□□ 0.73
PRPF39-202ENST00000424478 FER1L4A9Z1Z3 1794 aa19.59■□□□□ 0.73
PRPF39-202ENST00000424478 ZMYM3Q14202 1370 aa19.58■□□□□ 0.72
PRPF39-202ENST00000424478 LMTK2Q8IWU2 1503 aa19.57■□□□□ 0.72
PRPF39-202ENST00000424478 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
PRPF39-202ENST00000424478 RGL3Q3MIN7 710 aa19.56■□□□□ 0.72
PRPF39-202ENST00000424478 SENP3Q9H4L4 574 aaPredicted RBP19.55■□□□□ 0.72
PRPF39-202ENST00000424478 ZC3H13Q5T200 1668 aaKnown RBP19.55■□□□□ 0.72
PRPF39-202ENST00000424478 CHGAP10645 457 aaKnown RBP19.54■□□□□ 0.72
PRPF39-202ENST00000424478 SPHKAPQ2M3C7 1700 aa19.54■□□□□ 0.72
PRPF39-202ENST00000424478 ACIN1Q9UKV3 1341 aaKnown RBP19.53■□□□□ 0.72
PRPF39-202ENST00000424478 CCDC144AA2RUR9 1427 aa19.51■□□□□ 0.71
PRPF39-202ENST00000424478 CLTCL1P53675 1640 aa19.5■□□□□ 0.71
PRPF39-202ENST00000424478 PREX1Q8TCU6 1659 aa19.5■□□□□ 0.71
PRPF39-202ENST00000424478 SYNMO15061 1565 aa19.5■□□□□ 0.71
PRPF39-202ENST00000424478 C3P01024 1663 aa19.5■□□□□ 0.71
PRPF39-202ENST00000424478 ADAMTSL3P82987 1691 aa19.5■□□□□ 0.71
PRPF39-202ENST00000424478 PPP6R1Q9UPN7 881 aa19.49■□□□□ 0.71
PRPF39-202ENST00000424478 KDM4FA0A1W2PPD8 638 aa19.48■□□□□ 0.71
PRPF39-202ENST00000424478 IDI1Q13907 227 aa19.48■□□□□ 0.71
PRPF39-202ENST00000424478 PTPRTO14522 1441 aa19.48■□□□□ 0.71
PRPF39-202ENST00000424478 ERVK-7P63135 1459 aa19.48■□□□□ 0.71
PRPF39-202ENST00000424478 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
PRPF39-202ENST00000424478 TRPM2O94759 1503 aa19.47■□□□□ 0.71
PRPF39-202ENST00000424478 NUTM2DQ5VT03 806 aaPredicted RBP19.47■□□□□ 0.71
PRPF39-202ENST00000424478 KDM2AQ9Y2K7 1162 aa19.47■□□□□ 0.71
PRPF39-202ENST00000424478 RPRD2Q5VT52 1461 aaKnown RBP19.47■□□□□ 0.71
PRPF39-202ENST00000424478 L3MBTL2Q969R5 705 aa19.46■□□□□ 0.71
PRPF39-202ENST00000424478 ARHGAP31Q2M1Z3 1444 aa19.46■□□□□ 0.71
PRPF39-202ENST00000424478 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
PRPF39-202ENST00000424478 NOS1P29475 1434 aa19.46■□□□□ 0.71
PRPF39-202ENST00000424478 ZNF326Q5BKZ1 582 aaKnown RBP19.45■□□□□ 0.7
PRPF39-202ENST00000424478 CNTLNQ9NXG0 1405 aa19.44■□□□□ 0.7
PRPF39-202ENST00000424478 MROH2AA6NES4 1674 aa19.41■□□□□ 0.7
PRPF39-202ENST00000424478 DCAF11Q8TEB1 546 aa19.41■□□□□ 0.7
PRPF39-202ENST00000424478 MYO5BQ9ULV0 1848 aa19.4■□□□□ 0.7
PRPF39-202ENST00000424478 PTPRMP28827 1452 aa19.4■□□□□ 0.7
PRPF39-202ENST00000424478 TNRQ92752 1358 aa19.4■□□□□ 0.7
PRPF39-202ENST00000424478 SPATA31D1Q6ZQQ2 1576 aa19.4■□□□□ 0.7
PRPF39-202ENST00000424478 STAG3Q9UJ98 1225 aa19.39■□□□□ 0.69
PRPF39-202ENST00000424478 PIK3C2BO00750 1634 aa19.37■□□□□ 0.69
PRPF39-202ENST00000424478 KIF1BO60333 1816 aa19.36■□□□□ 0.69
PRPF39-202ENST00000424478 SPATA31E1Q6ZUB1 1445 aa19.36■□□□□ 0.69
PRPF39-202ENST00000424478 NBPF8Q3BBV2 869 aa19.34■□□□□ 0.69
PRPF39-202ENST00000424478 SLC52A1Q9NWF4 448 aa19.34■□□□□ 0.69
PRPF39-202ENST00000424478 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.69
PRPF39-202ENST00000424478 PPP1R15AO75807 674 aaPredicted RBP19.32■□□□□ 0.68
PRPF39-202ENST00000424478 ADGRB3O60242 1522 aa19.31■□□□□ 0.68
PRPF39-202ENST00000424478 TMEM131LA2VDJ0 1609 aa19.31■□□□□ 0.68
PRPF39-202ENST00000424478 ADGRF5Q8IZF2 1346 aa19.29■□□□□ 0.68
PRPF39-202ENST00000424478 MYO3AQ8NEV4 1616 aa19.29■□□□□ 0.68
PRPF39-202ENST00000424478 A2ML1A8K2U0 1454 aa19.28■□□□□ 0.68
PRPF39-202ENST00000424478 HIRIP3Q9BW71 556 aaPredicted RBP19.26■□□□□ 0.67
PRPF39-202ENST00000424478 UBR1Q8IWV7 1749 aa19.25■□□□□ 0.67
PRPF39-202ENST00000424478 HSPA2P54652 639 aa19.25■□□□□ 0.67
PRPF39-202ENST00000424478 NBPF1Q3BBV0 1214 aa19.23■□□□□ 0.67
PRPF39-202ENST00000424478 CEP170BQ9Y4F5 1589 aaPredicted RBP19.22■□□□□ 0.67
PRPF39-202ENST00000424478 NEXMIFQ5QGS0 1516 aa19.22■□□□□ 0.67
PRPF39-202ENST00000424478 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
PRPF39-202ENST00000424478 LTKP29376 864 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms