RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 EIF2AK4Q9P2K8 1649 aaKnown RBP20.75■□□□□ 0.91
GTF3C2-204ENST00000423998 ANKRD50Q9ULJ7 1429 aa20.74■□□□□ 0.91
GTF3C2-204ENST00000423998 MADDQ8WXG6 1647 aa20.73■□□□□ 0.91
GTF3C2-204ENST00000423998 FER1L4A9Z1Z3 1794 aa20.72■□□□□ 0.91
GTF3C2-204ENST00000423998 ZMYM3Q14202 1370 aa20.72■□□□□ 0.91
GTF3C2-204ENST00000423998 SIGLEC1Q9BZZ2 1709 aa20.69■□□□□ 0.9
GTF3C2-204ENST00000423998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.68■□□□□ 0.92e-9■□□□□ 10
GTF3C2-204ENST00000423998 PTPRKQ15262 1439 aa20.68■□□□□ 0.9
GTF3C2-204ENST00000423998 RIMS1Q86UR5 1692 aaKnown RBP20.67■□□□□ 0.9
GTF3C2-204ENST00000423998 PLPPR3Q6T4P5 718 aa20.66■□□□□ 0.9
GTF3C2-204ENST00000423998 KDM5DQ9BY66 1539 aa20.66■□□□□ 0.9
GTF3C2-204ENST00000423998 MROH2AA6NES4 1674 aa20.64■□□□□ 0.9
GTF3C2-204ENST00000423998 RNF17Q9BXT8 1623 aaKnown RBP20.64■□□□□ 0.9
GTF3C2-204ENST00000423998 NPATQ14207 1427 aa20.64■□□□□ 0.89
GTF3C2-204ENST00000423998 CEBPAP49715 358 aaPredicted RBP20.62■□□□□ 0.89
GTF3C2-204ENST00000423998 SETD1BQ9UPS6 1966 aaKnown RBP20.61■□□□□ 0.89
GTF3C2-204ENST00000423998 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
GTF3C2-204ENST00000423998 ZC3H13Q5T200 1668 aaKnown RBP20.6■□□□□ 0.89
GTF3C2-204ENST00000423998 PRDM15P57071 1507 aaPredicted RBP20.58■□□□□ 0.89
GTF3C2-204ENST00000423998 CLTCQ00610 1675 aaKnown RBP20.58■□□□□ 0.88
GTF3C2-204ENST00000423998 NAIPQ13075 1403 aa20.57■□□□□ 0.88
GTF3C2-204ENST00000423998 NUP155O75694 1391 aa20.57■□□□□ 0.88
GTF3C2-204ENST00000423998 ARHGAP31Q2M1Z3 1444 aa20.56■□□□□ 0.88
GTF3C2-204ENST00000423998 UHRF1BP1Q6BDS2 1440 aa20.56■□□□□ 0.88
GTF3C2-204ENST00000423998 PZPP20742 1482 aa20.56■□□□□ 0.88
GTF3C2-204ENST00000423998 ABCC3O15438 1527 aa20.55■□□□□ 0.88
GTF3C2-204ENST00000423998 DEPDC5O75140 1603 aa20.55■□□□□ 0.88
GTF3C2-204ENST00000423998 LMTK2Q8IWU2 1503 aa20.53■□□□□ 0.88
GTF3C2-204ENST00000423998 TRIM52Q96A61 297 aa20.53■□□□□ 0.88
GTF3C2-204ENST00000423998 C3P01024 1663 aa20.53■□□□□ 0.88
GTF3C2-204ENST00000423998 TNRQ92752 1358 aa20.51■□□□□ 0.87
GTF3C2-204ENST00000423998 HRCP23327 699 aa20.51■□□□□ 0.87
GTF3C2-204ENST00000423998 RPRD2Q5VT52 1461 aaKnown RBP20.5■□□□□ 0.87
GTF3C2-204ENST00000423998 SLC52A1Q9NWF4 448 aa20.49■□□□□ 0.87
GTF3C2-204ENST00000423998 SETD5Q9C0A6 1442 aa20.49■□□□□ 0.87
GTF3C2-204ENST00000423998 MROH1Q8NDA8 1641 aa20.49■□□□□ 0.87
GTF3C2-204ENST00000423998 FBXO31Q5XUX0 539 aaPredicted RBP20.48■□□□□ 0.87
GTF3C2-204ENST00000423998 THEMISQ8N1K5 641 aaPredicted RBP20.48■□□□□ 0.87
GTF3C2-204ENST00000423998 DMRT2Q9Y5R5 561 aa20.48■□□□□ 0.87
GTF3C2-204ENST00000423998 UNC13BO14795 1591 aa20.47■□□□□ 0.87
GTF3C2-204ENST00000423998 VWDEQ8N2E2 1590 aa20.47■□□□□ 0.87
GTF3C2-204ENST00000423998 NLRP1Q9C000 1473 aa20.47■□□□□ 0.87
GTF3C2-204ENST00000423998 GCC2Q8IWJ2 1684 aa20.47■□□□□ 0.87
GTF3C2-204ENST00000423998 PREX1Q8TCU6 1659 aa20.46■□□□□ 0.87
GTF3C2-204ENST00000423998 TRIM26Q12899 539 aaPredicted RBP20.46■□□□□ 0.87
GTF3C2-204ENST00000423998 STAG3Q9UJ98 1225 aa20.45■□□□□ 0.86
GTF3C2-204ENST00000423998 CAMSAP1Q5T5Y3 1602 aa20.45■□□□□ 0.86
GTF3C2-204ENST00000423998 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
GTF3C2-204ENST00000423998 ERVK-7P63135 1459 aa20.42■□□□□ 0.86
GTF3C2-204ENST00000423998 LMTK3Q96Q04 1460 aa20.42■□□□□ 0.86
GTF3C2-204ENST00000423998 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
GTF3C2-204ENST00000423998 EFCAB6Q5THR3 1501 aa20.41■□□□□ 0.86
GTF3C2-204ENST00000423998 IQGAP3Q86VI3 1631 aa20.41■□□□□ 0.86
GTF3C2-204ENST00000423998 TET3O43151 1660 aa20.41■□□□□ 0.86
GTF3C2-204ENST00000423998 CEP152O94986 1710 aa20.41■□□□□ 0.86
GTF3C2-204ENST00000423998 A2ML1A8K2U0 1454 aa20.4■□□□□ 0.86
GTF3C2-204ENST00000423998 SPATA31D1Q6ZQQ2 1576 aa20.4■□□□□ 0.86
GTF3C2-204ENST00000423998 PKD2Q13563 968 aa20.38■□□□□ 0.85
GTF3C2-204ENST00000423998 NOS1P29475 1434 aa20.36■□□□□ 0.85
GTF3C2-204ENST00000423998 RAB3GAP2Q9H2M9 1393 aa20.35■□□□□ 0.85
GTF3C2-204ENST00000423998 HSPA2P54652 639 aa20.35■□□□□ 0.85
GTF3C2-204ENST00000423998 ANKLE2Q86XL3 938 aa20.35■□□□□ 0.85
GTF3C2-204ENST00000423998 MPHOSPH9Q99550 1183 aa20.35■□□□□ 0.85
GTF3C2-204ENST00000423998 CEP170BQ9Y4F5 1589 aaPredicted RBP20.34■□□□□ 0.85
GTF3C2-204ENST00000423998 EID1Q9Y6B2 187 aa20.34■□□□□ 0.85
GTF3C2-204ENST00000423998 IDI1Q13907 227 aa20.33■□□□□ 0.85
GTF3C2-204ENST00000423998 UGGT1Q9NYU2 1555 aa20.33■□□□□ 0.84
GTF3C2-204ENST00000423998 MYO3AQ8NEV4 1616 aa20.32■□□□□ 0.84
GTF3C2-204ENST00000423998 PLA2R1Q13018 1463 aa20.31■□□□□ 0.84
GTF3C2-204ENST00000423998 ZNF142P52746 1687 aaPredicted RBP20.3■□□□□ 0.84
GTF3C2-204ENST00000423998 CFAP65Q6ZU64 1925 aaKnown RBP20.29■□□□□ 0.84
GTF3C2-204ENST00000423998 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
GTF3C2-204ENST00000423998 PTPRTO14522 1441 aa20.27■□□□□ 0.83
GTF3C2-204ENST00000423998 CHGAP10645 457 aaKnown RBP20.26■□□□□ 0.83
GTF3C2-204ENST00000423998 E9PCH4 1651 aa20.26■□□□□ 0.83
GTF3C2-204ENST00000423998 KDM5AP29375 1690 aaKnown RBP20.24■□□□□ 0.83
GTF3C2-204ENST00000423998 TXNDC2Q86VQ3 553 aa20.23■□□□□ 0.83
GTF3C2-204ENST00000423998 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
GTF3C2-204ENST00000423998 PPP1R15AO75807 674 aaPredicted RBP20.2■□□□□ 0.82
GTF3C2-204ENST00000423998 ZNF326Q5BKZ1 582 aaKnown RBP20.2■□□□□ 0.82
GTF3C2-204ENST00000423998 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
GTF3C2-204ENST00000423998 SYNMO15061 1565 aa20.2■□□□□ 0.82
GTF3C2-204ENST00000423998 CCDC144AA2RUR9 1427 aa20.19■□□□□ 0.82
GTF3C2-204ENST00000423998 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
GTF3C2-204ENST00000423998 TRPM2O94759 1503 aa20.17■□□□□ 0.82
GTF3C2-204ENST00000423998 SPHKAPQ2M3C7 1700 aa20.17■□□□□ 0.82
GTF3C2-204ENST00000423998 ADGRB3O60242 1522 aa20.17■□□□□ 0.82
GTF3C2-204ENST00000423998 SLIT1O75093 1534 aa20.17■□□□□ 0.82
GTF3C2-204ENST00000423998 PIK3C2BO00750 1634 aa20.16■□□□□ 0.82
GTF3C2-204ENST00000423998 BCANQ96GW7 911 aa20.16■□□□□ 0.82
GTF3C2-204ENST00000423998 UBR1Q8IWV7 1749 aa20.16■□□□□ 0.82
GTF3C2-204ENST00000423998 SCAF11Q99590 1463 aaKnown RBP20.15■□□□□ 0.82
GTF3C2-204ENST00000423998 MED14O60244 1454 aa20.14■□□□□ 0.81
GTF3C2-204ENST00000423998 ARHGAP23Q9P227 1491 aa20.14■□□□□ 0.81
GTF3C2-204ENST00000423998 VGFO15240 615 aaPredicted RBP20.14■□□□□ 0.81
GTF3C2-204ENST00000423998 FOXD1Q16676 465 aa20.13■□□□□ 0.81
GTF3C2-204ENST00000423998 NPHP4O75161 1426 aaPredicted RBP20.12■□□□□ 0.81
GTF3C2-204ENST00000423998 STAC3Q96MF2 364 aa20.12■□□□□ 0.81
GTF3C2-204ENST00000423998 RIMS2Q9UQ26 1411 aa20.1■□□□□ 0.81
GTF3C2-204ENST00000423998 LTKP29376 864 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 1146.8 ms