RNA–Protein interactions for RNA: ENST00000423424.5

FNDC3B-205, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3 BASIC

Gene FNDC3B, Length 408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-205ENST00000423424 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
FNDC3B-205ENST00000423424 THEMISQ8N1K5 641 aaPredicted RBP13.56□□□□□ -0.24
FNDC3B-205ENST00000423424 IQGAP1P46940 1657 aa13.56□□□□□ -0.24
FNDC3B-205ENST00000423424 SYCP2Q9BX26 1530 aa13.55□□□□□ -0.24
FNDC3B-205ENST00000423424 INO80Q9ULG1 1556 aaPredicted RBP13.54□□□□□ -0.24
FNDC3B-205ENST00000423424 FAM135BQ49AJ0 1406 aa13.54□□□□□ -0.24
FNDC3B-205ENST00000423424 HNRNPMP52272 730 aaKnown RBP eCLIP13.53□□□□□ -0.242e-7■■■□□ 18.4
FNDC3B-205ENST00000423424 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
FNDC3B-205ENST00000423424 FAM135AQ9P2D6 1515 aa13.53□□□□□ -0.24
FNDC3B-205ENST00000423424 UGGT1Q9NYU2 1555 aa13.53□□□□□ -0.24
FNDC3B-205ENST00000423424 CDC42BPAQ5VT25 1732 aa13.52□□□□□ -0.25
FNDC3B-205ENST00000423424 LRRIQ1Q96JM4 1722 aa13.51□□□□□ -0.25
FNDC3B-205ENST00000423424 PZPP20742 1482 aa13.51□□□□□ -0.25
FNDC3B-205ENST00000423424 NLRP1Q9C000 1473 aa13.51□□□□□ -0.25
FNDC3B-205ENST00000423424 MIA2Q96PC5 1412 aa13.49□□□□□ -0.25
FNDC3B-205ENST00000423424 ARHGAP35Q9NRY4 1499 aa13.47□□□□□ -0.25
FNDC3B-205ENST00000423424 KIAA1107Q9UPP5 1409 aa13.47□□□□□ -0.25
FNDC3B-205ENST00000423424 ADGBQ8N7X0 1667 aa13.47□□□□□ -0.25
FNDC3B-205ENST00000423424 KDM5DQ9BY66 1539 aa13.46□□□□□ -0.25
FNDC3B-205ENST00000423424 TRIM52Q96A61 297 aa13.46□□□□□ -0.25
FNDC3B-205ENST00000423424 ZC3H13Q5T200 1668 aaKnown RBP13.46□□□□□ -0.26
FNDC3B-205ENST00000423424 EEA1Q15075 1411 aa13.46□□□□□ -0.26
FNDC3B-205ENST00000423424 XIRP1Q702N8 1843 aaKnown RBP13.46□□□□□ -0.26
FNDC3B-205ENST00000423424 ROBO1Q9Y6N7 1651 aa13.45□□□□□ -0.26
FNDC3B-205ENST00000423424 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
FNDC3B-205ENST00000423424 PLEKHH2Q8IVE3 1493 aa13.43□□□□□ -0.26
FNDC3B-205ENST00000423424 DHX29Q7Z478 1369 aaKnown RBP13.42□□□□□ -0.26
FNDC3B-205ENST00000423424 JCADQ9P266 1359 aa13.42□□□□□ -0.26
FNDC3B-205ENST00000423424 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
FNDC3B-205ENST00000423424 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
FNDC3B-205ENST00000423424 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
FNDC3B-205ENST00000423424 KIF3BO15066 747 aa13.4□□□□□ -0.26
FNDC3B-205ENST00000423424 CFDP1Q9UEE9 299 aaPredicted RBP13.39□□□□□ -0.27
FNDC3B-205ENST00000423424 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
FNDC3B-205ENST00000423424 LRP6O75581 1613 aa13.39□□□□□ -0.27
FNDC3B-205ENST00000423424 LRRC9Q6ZRR7 1453 aa13.38□□□□□ -0.27
FNDC3B-205ENST00000423424 TMEM94Q12767 1356 aa13.38□□□□□ -0.27
FNDC3B-205ENST00000423424 RXRBP28702 533 aa13.37□□□□□ -0.27
FNDC3B-205ENST00000423424 RTEL1-TNFRSF6BF6WH68 1400 aa13.37□□□□□ -0.27
FNDC3B-205ENST00000423424 PHLPP1O60346 1717 aa13.36□□□□□ -0.27
FNDC3B-205ENST00000423424 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
FNDC3B-205ENST00000423424 LTKP29376 864 aa13.36□□□□□ -0.27
FNDC3B-205ENST00000423424 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
FNDC3B-205ENST00000423424 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
FNDC3B-205ENST00000423424 CASKIN1Q8WXD9 1431 aa13.35□□□□□ -0.27
FNDC3B-205ENST00000423424 UBTFP17480 764 aaKnown RBP13.34□□□□□ -0.27
FNDC3B-205ENST00000423424 MBD5Q9P267 1494 aa13.34□□□□□ -0.27
FNDC3B-205ENST00000423424 SPATA31A6Q5VVP1 1343 aa13.34□□□□□ -0.27
FNDC3B-205ENST00000423424 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.28
FNDC3B-205ENST00000423424 RBM33Q96EV2 1170 aaKnown RBP13.33□□□□□ -0.28
FNDC3B-205ENST00000423424 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
FNDC3B-205ENST00000423424 ARHGAP23Q9P227 1491 aa13.33□□□□□ -0.28
FNDC3B-205ENST00000423424 UBR1Q8IWV7 1749 aa13.33□□□□□ -0.28
FNDC3B-205ENST00000423424 CCNB3Q8WWL7 1395 aa13.32□□□□□ -0.28
FNDC3B-205ENST00000423424 COL16A1Q07092 1604 aaPredicted RBP13.32□□□□□ -0.28
FNDC3B-205ENST00000423424 ERVK-7P63135 1459 aa13.32□□□□□ -0.28
FNDC3B-205ENST00000423424 NCOA2Q15596 1464 aa13.32□□□□□ -0.28
FNDC3B-205ENST00000423424 SLIT1O75093 1534 aa13.32□□□□□ -0.28
FNDC3B-205ENST00000423424 ZNF644Q9H582 1327 aaPredicted RBP13.32□□□□□ -0.28
FNDC3B-205ENST00000423424 SLAIN2Q9P270 581 aa13.31□□□□□ -0.28
FNDC3B-205ENST00000423424 FGD6Q6ZV73 1430 aa13.3□□□□□ -0.28
FNDC3B-205ENST00000423424 KCNA6P17658 529 aa13.3□□□□□ -0.28
FNDC3B-205ENST00000423424 PROSER2Q86WR7 435 aaPredicted RBP13.3□□□□□ -0.28
FNDC3B-205ENST00000423424 PRDM15P57071 1507 aaPredicted RBP13.29□□□□□ -0.28
FNDC3B-205ENST00000423424 EID1Q9Y6B2 187 aa13.28□□□□□ -0.28
FNDC3B-205ENST00000423424 MSH6P52701 1360 aa13.28□□□□□ -0.28
FNDC3B-205ENST00000423424 ABCC3O15438 1527 aa13.28□□□□□ -0.28
FNDC3B-205ENST00000423424 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.29
FNDC3B-205ENST00000423424 RGS12O14924 1447 aa13.27□□□□□ -0.29
FNDC3B-205ENST00000423424 TIAM1Q13009 1591 aa13.27□□□□□ -0.29
FNDC3B-205ENST00000423424 SETBP1Q9Y6X0 1596 aa13.27□□□□□ -0.29
FNDC3B-205ENST00000423424 FYCO1Q9BQS8 1478 aa13.26□□□□□ -0.29
FNDC3B-205ENST00000423424 SHPRHQ149N8 1683 aa13.24□□□□□ -0.29
FNDC3B-205ENST00000423424 NKTRP30414 1462 aaKnown RBP13.24□□□□□ -0.29
FNDC3B-205ENST00000423424 AFF2P51816 1311 aa13.24□□□□□ -0.29
FNDC3B-205ENST00000423424 NUTM2BA6NNL0 878 aaPredicted RBP13.24□□□□□ -0.29
FNDC3B-205ENST00000423424 NUTM2EB1AL46 878 aaPredicted RBP13.24□□□□□ -0.29
FNDC3B-205ENST00000423424 FOXD1Q16676 465 aa13.24□□□□□ -0.29
FNDC3B-205ENST00000423424 NUTM2DQ5VT03 806 aaPredicted RBP13.24□□□□□ -0.29
FNDC3B-205ENST00000423424 NUTM2AQ8IVF1 878 aaPredicted RBP13.24□□□□□ -0.29
FNDC3B-205ENST00000423424 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
FNDC3B-205ENST00000423424 TMEM2Q9UHN6 1383 aa13.23□□□□□ -0.29
FNDC3B-205ENST00000423424 SLC26A8Q96RN1 970 aa13.23□□□□□ -0.29
FNDC3B-205ENST00000423424 EP400Q96L91 3159 aa13.23□□□□□ -0.29
FNDC3B-205ENST00000423424 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
FNDC3B-205ENST00000423424 CAMSAP2Q08AD1 1489 aa13.21□□□□□ -0.3
FNDC3B-205ENST00000423424 TET3O43151 1660 aa13.21□□□□□ -0.3
FNDC3B-205ENST00000423424 AHDC1Q5TGY3 1603 aaPredicted RBP13.21□□□□□ -0.3
FNDC3B-205ENST00000423424 ATAD2Q6PL18 1390 aa13.2□□□□□ -0.3
FNDC3B-205ENST00000423424 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
FNDC3B-205ENST00000423424 MTUS2Q5JR59 1369 aa13.19□□□□□ -0.3
FNDC3B-205ENST00000423424 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
FNDC3B-205ENST00000423424 QTRT2Q9H974 415 aaKnown RBP13.18□□□□□ -0.3
FNDC3B-205ENST00000423424 PIK3C2BO00750 1634 aa13.17□□□□□ -0.3
FNDC3B-205ENST00000423424 DIP2AQ14689 1571 aa13.17□□□□□ -0.3
FNDC3B-205ENST00000423424 MROH1Q8NDA8 1641 aa13.17□□□□□ -0.3
FNDC3B-205ENST00000423424 RSPH4AQ5TD94 716 aa13.16□□□□□ -0.3
FNDC3B-205ENST00000423424 CEP152O94986 1710 aa13.16□□□□□ -0.3
FNDC3B-205ENST00000423424 STAG3Q9UJ98 1225 aa13.15□□□□□ -0.3
FNDC3B-205ENST00000423424 EFCAB6Q5THR3 1501 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms