RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 PRDM15P57071 1507 aaPredicted RBP26.24■■□□□ 1.79
LINC00271-201ENST00000421378 MROH1Q8NDA8 1641 aa26.24■■□□□ 1.79
LINC00271-201ENST00000421378 UNC13BO14795 1591 aa26.23■■□□□ 1.79
LINC00271-201ENST00000421378 PCGF6Q9BYE7 350 aa26.21■■□□□ 1.79
LINC00271-201ENST00000421378 RAB3GAP2Q9H2M9 1393 aa26.21■■□□□ 1.79
LINC00271-201ENST00000421378 ADAMTSL3P82987 1691 aa26.19■■□□□ 1.78
LINC00271-201ENST00000421378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.18■■□□□ 1.78
LINC00271-201ENST00000421378 FAM135AQ9P2D6 1515 aa26.18■■□□□ 1.78
LINC00271-201ENST00000421378 FER1L4A9Z1Z3 1794 aa26.18■■□□□ 1.78
LINC00271-201ENST00000421378 PPP6R1Q9UPN7 881 aa26.17■■□□□ 1.78
LINC00271-201ENST00000421378 KANK1Q14678 1352 aa26.17■■□□□ 1.78
LINC00271-201ENST00000421378 KDM5DQ9BY66 1539 aa26.17■■□□□ 1.78
LINC00271-201ENST00000421378 MADDQ8WXG6 1647 aa26.16■■□□□ 1.78
LINC00271-201ENST00000421378 ZC3H13Q5T200 1668 aaKnown RBP26.15■■□□□ 1.78
LINC00271-201ENST00000421378 ESF1Q9H501 851 aaKnown RBP26.15■■□□□ 1.78
LINC00271-201ENST00000421378 VWDEQ8N2E2 1590 aa26.14■■□□□ 1.78
LINC00271-201ENST00000421378 WASHC2CQ9Y4E1 1318 aa26.13■■□□□ 1.77
LINC00271-201ENST00000421378 ABCC3O15438 1527 aa26.13■■□□□ 1.77
LINC00271-201ENST00000421378 NUP155O75694 1391 aa26.13■■□□□ 1.77
LINC00271-201ENST00000421378 CLTCQ00610 1675 aaKnown RBP26.12■■□□□ 1.77
LINC00271-201ENST00000421378 CNTLNQ9NXG0 1405 aa26.12■■□□□ 1.77
LINC00271-201ENST00000421378 IQGAP3Q86VI3 1631 aa26.12■■□□□ 1.77
LINC00271-201ENST00000421378 CEP152O94986 1710 aa26.11■■□□□ 1.77
LINC00271-201ENST00000421378 ACIN1Q9UKV3 1341 aaKnown RBP26.11■■□□□ 1.77
LINC00271-201ENST00000421378 TRIM52Q96A61 297 aa26.11■■□□□ 1.77
LINC00271-201ENST00000421378 RIMS1Q86UR5 1692 aaKnown RBP26.1■■□□□ 1.77
LINC00271-201ENST00000421378 HRCP23327 699 aa26.09■■□□□ 1.77
LINC00271-201ENST00000421378 LMTK2Q8IWU2 1503 aa26.08■■□□□ 1.77
LINC00271-201ENST00000421378 MROH2AA6NES4 1674 aa26.07■■□□□ 1.76
LINC00271-201ENST00000421378 CAMSAP1Q5T5Y3 1602 aa26.06■■□□□ 1.76
LINC00271-201ENST00000421378 KDM4FA0A1W2PPD8 638 aa26.06■■□□□ 1.76
LINC00271-201ENST00000421378 TET3O43151 1660 aa26.04■■□□□ 1.76
LINC00271-201ENST00000421378 EFCAB6Q5THR3 1501 aa26.03■■□□□ 1.76
LINC00271-201ENST00000421378 PZPP20742 1482 aa26.02■■□□□ 1.76
LINC00271-201ENST00000421378 ZMYM3Q14202 1370 aa26.02■■□□□ 1.76
LINC00271-201ENST00000421378 PTPRMP28827 1452 aa26■■□□□ 1.75
LINC00271-201ENST00000421378 C3P01024 1663 aa26■■□□□ 1.75
LINC00271-201ENST00000421378 SLC4A1APQ9BWU0 796 aaKnown RBP25.99■■□□□ 1.75
LINC00271-201ENST00000421378 NPATQ14207 1427 aa25.97■■□□□ 1.75
LINC00271-201ENST00000421378 ARHGAP31Q2M1Z3 1444 aa25.97■■□□□ 1.75
LINC00271-201ENST00000421378 E9PCH4 1651 aa25.95■■□□□ 1.75
LINC00271-201ENST00000421378 RPRD2Q5VT52 1461 aaKnown RBP25.95■■□□□ 1.75
LINC00271-201ENST00000421378 MPHOSPH9Q99550 1183 aa25.95■■□□□ 1.74
LINC00271-201ENST00000421378 CEBPAP49715 358 aaPredicted RBP25.94■■□□□ 1.74
LINC00271-201ENST00000421378 PLPPR3Q6T4P5 718 aa25.93■■□□□ 1.74
LINC00271-201ENST00000421378 PKD2Q13563 968 aa25.9■■□□□ 1.74
LINC00271-201ENST00000421378 PREX1Q8TCU6 1659 aa25.89■■□□□ 1.74
LINC00271-201ENST00000421378 ERVK-7P63135 1459 aa25.88■■□□□ 1.73
LINC00271-201ENST00000421378 FBXO31Q5XUX0 539 aaPredicted RBP25.87■■□□□ 1.73
LINC00271-201ENST00000421378 SPATA31D1Q6ZQQ2 1576 aa25.87■■□□□ 1.73
LINC00271-201ENST00000421378 CFAP65Q6ZU64 1925 aaKnown RBP25.87■■□□□ 1.73
LINC00271-201ENST00000421378 NOS1P29475 1434 aa25.84■■□□□ 1.73
LINC00271-201ENST00000421378 FOXD1Q16676 465 aa25.83■■□□□ 1.73
LINC00271-201ENST00000421378 SPHKAPQ2M3C7 1700 aa25.83■■□□□ 1.73
LINC00271-201ENST00000421378 DHX57Q6P158 1386 aaKnown RBP25.81■■□□□ 1.72
LINC00271-201ENST00000421378 TNRQ92752 1358 aa25.81■■□□□ 1.72
LINC00271-201ENST00000421378 SYNMO15061 1565 aa25.8■■□□□ 1.72
LINC00271-201ENST00000421378 PTPRTO14522 1441 aa25.79■■□□□ 1.72
LINC00271-201ENST00000421378 TRPM2O94759 1503 aa25.78■■□□□ 1.72
LINC00271-201ENST00000421378 MYO3AQ8NEV4 1616 aa25.76■■□□□ 1.71
LINC00271-201ENST00000421378 PLA2R1Q13018 1463 aa25.76■■□□□ 1.71
LINC00271-201ENST00000421378 SETD1BQ9UPS6 1966 aaKnown RBP25.75■■□□□ 1.71
LINC00271-201ENST00000421378 NLRP1Q9C000 1473 aa25.73■■□□□ 1.71
LINC00271-201ENST00000421378 UGGT1Q9NYU2 1555 aa25.73■■□□□ 1.71
LINC00271-201ENST00000421378 PIK3C2BO00750 1634 aa25.72■■□□□ 1.71
LINC00271-201ENST00000421378 SLC52A1Q9NWF4 448 aa25.72■■□□□ 1.71
LINC00271-201ENST00000421378 ANKRD30BQ9BXX2 1392 aa25.71■■□□□ 1.71
LINC00271-201ENST00000421378 UHRF1BP1Q6BDS2 1440 aa25.71■■□□□ 1.71
LINC00271-201ENST00000421378 CLTCL1P53675 1640 aa25.69■■□□□ 1.7
LINC00271-201ENST00000421378 CCDC144AA2RUR9 1427 aa25.69■■□□□ 1.7
LINC00271-201ENST00000421378 CEP170BQ9Y4F5 1589 aaPredicted RBP25.68■■□□□ 1.7
LINC00271-201ENST00000421378 ZNF142P52746 1687 aaPredicted RBP25.68■■□□□ 1.7
LINC00271-201ENST00000421378 IDI1Q13907 227 aa25.67■■□□□ 1.7
LINC00271-201ENST00000421378 A2ML1A8K2U0 1454 aa25.66■■□□□ 1.7
LINC00271-201ENST00000421378 AEBP2Q6ZN18 517 aaPredicted RBP25.63■■□□□ 1.69
LINC00271-201ENST00000421378 ADGRB3O60242 1522 aa25.62■■□□□ 1.69
LINC00271-201ENST00000421378 KDM5AP29375 1690 aaKnown RBP25.62■■□□□ 1.69
LINC00271-201ENST00000421378 LMTK3Q96Q04 1460 aa25.61■■□□□ 1.69
LINC00271-201ENST00000421378 UBR1Q8IWV7 1749 aa25.61■■□□□ 1.69
LINC00271-201ENST00000421378 STAG3Q9UJ98 1225 aa25.61■■□□□ 1.69
LINC00271-201ENST00000421378 KIF1BO60333 1816 aa25.6■■□□□ 1.69
LINC00271-201ENST00000421378 TMEM131LA2VDJ0 1609 aa25.59■■□□□ 1.69
LINC00271-201ENST00000421378 CCER1Q8TC90 406 aaPredicted RBP25.59■■□□□ 1.69
LINC00271-201ENST00000421378 CHGAP10645 457 aaKnown RBP25.57■■□□□ 1.68
LINC00271-201ENST00000421378 MYO5BQ9ULV0 1848 aa25.55■■□□□ 1.68
LINC00271-201ENST00000421378 CLSPNQ9HAW4 1339 aa25.55■■□□□ 1.68
LINC00271-201ENST00000421378 THEMISQ8N1K5 641 aaPredicted RBP25.53■■□□□ 1.68
LINC00271-201ENST00000421378 NEURL4Q96JN8 1562 aa25.53■■□□□ 1.68
LINC00271-201ENST00000421378 SPATA31E1Q6ZUB1 1445 aa25.52■■□□□ 1.68
LINC00271-201ENST00000421378 SIN3AQ96ST3 1273 aa25.51■■□□□ 1.67
LINC00271-201ENST00000421378 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
LINC00271-201ENST00000421378 TMEM2Q9UHN6 1383 aa25.48■■□□□ 1.67
LINC00271-201ENST00000421378 HSPA2P54652 639 aa25.48■■□□□ 1.67
LINC00271-201ENST00000421378 NEUROD1Q13562 356 aa25.48■■□□□ 1.67
LINC00271-201ENST00000421378 SLIT1O75093 1534 aa25.48■■□□□ 1.67
LINC00271-201ENST00000421378 RGL3Q3MIN7 710 aa25.46■■□□□ 1.67
LINC00271-201ENST00000421378 ARHGAP23Q9P227 1491 aa25.46■■□□□ 1.67
LINC00271-201ENST00000421378 ZFYVE9O95405 1425 aa25.43■■□□□ 1.66
LINC00271-201ENST00000421378 RIMS2Q9UQ26 1411 aa25.43■■□□□ 1.66
LINC00271-201ENST00000421378 NEXMIFQ5QGS0 1516 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms