RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 MROH2AA6NES4 1674 aa28.29■■■□□ 2.12
DDR1-233ENST00000421124 CLTCQ00610 1675 aaKnown RBP28.29■■■□□ 2.12
DDR1-233ENST00000421124 CNTLNQ9NXG0 1405 aa28.29■■■□□ 2.12
DDR1-233ENST00000421124 ROCK1Q13464 1354 aa28.29■■■□□ 2.12
DDR1-233ENST00000421124 PPP6R1Q9UPN7 881 aa28.27■■■□□ 2.12
DDR1-233ENST00000421124 C3P01024 1663 aa28.26■■■□□ 2.11
DDR1-233ENST00000421124 FAM135AQ9P2D6 1515 aa28.25■■■□□ 2.11
DDR1-233ENST00000421124 MROH1Q8NDA8 1641 aa28.23■■■□□ 2.11
DDR1-233ENST00000421124 KDM5DQ9BY66 1539 aa28.23■■■□□ 2.11
DDR1-233ENST00000421124 DEPDC5O75140 1603 aa28.21■■■□□ 2.11
DDR1-233ENST00000421124 ANKRD50Q9ULJ7 1429 aa28.2■■■□□ 2.11
DDR1-233ENST00000421124 PLPPR3Q6T4P5 718 aa28.2■■■□□ 2.1
DDR1-233ENST00000421124 ZC3H13Q5T200 1668 aaKnown RBP28.19■■■□□ 2.1
DDR1-233ENST00000421124 PRDM15P57071 1507 aaPredicted RBP28.19■■■□□ 2.1
DDR1-233ENST00000421124 CEP152O94986 1710 aa28.16■■■□□ 2.1
DDR1-233ENST00000421124 CEBPAP49715 358 aaPredicted RBP28.16■■■□□ 2.1
DDR1-233ENST00000421124 WASHC2CQ9Y4E1 1318 aa28.16■■■□□ 2.1
DDR1-233ENST00000421124 ZMYM3Q14202 1370 aa28.15■■■□□ 2.1
DDR1-233ENST00000421124 ABCC3O15438 1527 aa28.14■■■□□ 2.1
DDR1-233ENST00000421124 GCC2Q8IWJ2 1684 aa28.14■■■□□ 2.1
DDR1-233ENST00000421124 SETD1BQ9UPS6 1966 aaKnown RBP28.11■■■□□ 2.09
DDR1-233ENST00000421124 KANK1Q14678 1352 aa28.1■■■□□ 2.09
DDR1-233ENST00000421124 UNC13BO14795 1591 aa28.09■■■□□ 2.09
DDR1-233ENST00000421124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.09■■■□□ 2.09
DDR1-233ENST00000421124 CAMSAP1Q5T5Y3 1602 aa28.09■■■□□ 2.09
DDR1-233ENST00000421124 VWDEQ8N2E2 1590 aa28.07■■■□□ 2.08
DDR1-233ENST00000421124 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
DDR1-233ENST00000421124 NAIPQ13075 1403 aa28.07■■■□□ 2.08
DDR1-233ENST00000421124 NPATQ14207 1427 aa28.06■■■□□ 2.08
DDR1-233ENST00000421124 HFM1A2PYH4 1435 aa28.05■■■□□ 2.08
DDR1-233ENST00000421124 PZPP20742 1482 aa28.05■■■□□ 2.08
DDR1-233ENST00000421124 LMTK2Q8IWU2 1503 aa28.02■■■□□ 2.08
DDR1-233ENST00000421124 ILDR1Q86SU0 546 aaPredicted RBP28■■■□□ 2.07
DDR1-233ENST00000421124 CFAP65Q6ZU64 1925 aaKnown RBP28■■■□□ 2.07
DDR1-233ENST00000421124 LMTK3Q96Q04 1460 aa27.99■■■□□ 2.07
DDR1-233ENST00000421124 IQGAP3Q86VI3 1631 aa27.98■■■□□ 2.07
DDR1-233ENST00000421124 UHRF1BP1Q6BDS2 1440 aa27.97■■■□□ 2.07
DDR1-233ENST00000421124 ARHGAP31Q2M1Z3 1444 aa27.96■■■□□ 2.07
DDR1-233ENST00000421124 TET3O43151 1660 aa27.96■■■□□ 2.07
DDR1-233ENST00000421124 EFCAB6Q5THR3 1501 aa27.95■■■□□ 2.06
DDR1-233ENST00000421124 MYO3AQ8NEV4 1616 aa27.95■■■□□ 2.06
DDR1-233ENST00000421124 FBXO31Q5XUX0 539 aaPredicted RBP27.94■■■□□ 2.06
DDR1-233ENST00000421124 SPATA31D1Q6ZQQ2 1576 aa27.93■■■□□ 2.06
DDR1-233ENST00000421124 ERVK-7P63135 1459 aa27.91■■■□□ 2.06
DDR1-233ENST00000421124 NUP155O75694 1391 aa27.91■■■□□ 2.06
DDR1-233ENST00000421124 TNRQ92752 1358 aa27.91■■■□□ 2.06
DDR1-233ENST00000421124 ZNF142P52746 1687 aaPredicted RBP27.91■■■□□ 2.06
DDR1-233ENST00000421124 CEP170BQ9Y4F5 1589 aaPredicted RBP27.86■■■□□ 2.05
DDR1-233ENST00000421124 E9PCH4 1651 aa27.85■■■□□ 2.05
DDR1-233ENST00000421124 RPRD2Q5VT52 1461 aaKnown RBP27.85■■■□□ 2.05
DDR1-233ENST00000421124 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
DDR1-233ENST00000421124 NLRP1Q9C000 1473 aa27.83■■■□□ 2.04
DDR1-233ENST00000421124 HSPA2P54652 639 aa27.82■■■□□ 2.04
DDR1-233ENST00000421124 A2ML1A8K2U0 1454 aa27.82■■■□□ 2.04
DDR1-233ENST00000421124 TRIM52Q96A61 297 aa27.8■■■□□ 2.04
DDR1-233ENST00000421124 NOS1P29475 1434 aa27.78■■■□□ 2.04
DDR1-233ENST00000421124 SYNMO15061 1565 aa27.77■■■□□ 2.04
DDR1-233ENST00000421124 ACIN1Q9UKV3 1341 aaKnown RBP27.74■■■□□ 2.03
DDR1-233ENST00000421124 RAB3GAP2Q9H2M9 1393 aa27.73■■■□□ 2.03
DDR1-233ENST00000421124 UGGT1Q9NYU2 1555 aa27.73■■■□□ 2.03
DDR1-233ENST00000421124 PIK3C2BO00750 1634 aa27.71■■■□□ 2.03
DDR1-233ENST00000421124 SPHKAPQ2M3C7 1700 aa27.71■■■□□ 2.03
DDR1-233ENST00000421124 STRCQ7RTU9 1775 aa27.71■■■□□ 2.03
DDR1-233ENST00000421124 UBR1Q8IWV7 1749 aa27.7■■■□□ 2.03
DDR1-233ENST00000421124 SLC4A1APQ9BWU0 796 aaKnown RBP27.68■■■□□ 2.02
DDR1-233ENST00000421124 PLA2R1Q13018 1463 aa27.67■■■□□ 2.02
DDR1-233ENST00000421124 KDM5AP29375 1690 aaKnown RBP27.67■■■□□ 2.02
DDR1-233ENST00000421124 THEMISQ8N1K5 641 aaPredicted RBP27.65■■■□□ 2.02
DDR1-233ENST00000421124 SLC52A1Q9NWF4 448 aa27.65■■■□□ 2.02
DDR1-233ENST00000421124 PKD2Q13563 968 aa27.64■■■□□ 2.02
DDR1-233ENST00000421124 IDI1Q13907 227 aa27.63■■■□□ 2.01
DDR1-233ENST00000421124 POLR1AO95602 1720 aaPredicted RBP27.62■■■□□ 2.01
DDR1-233ENST00000421124 PTPRTO14522 1441 aa27.62■■■□□ 2.01
DDR1-233ENST00000421124 HRCP23327 699 aa27.62■■■□□ 2.01
DDR1-233ENST00000421124 TRIM26Q12899 539 aaPredicted RBP27.62■■■□□ 2.01
DDR1-233ENST00000421124 ADGRB3O60242 1522 aa27.62■■■□□ 2.01
DDR1-233ENST00000421124 MPHOSPH9Q99550 1183 aa27.6■■■□□ 2.01
DDR1-233ENST00000421124 MYO5BQ9ULV0 1848 aa27.6■■■□□ 2.01
DDR1-233ENST00000421124 TRPM2O94759 1503 aa27.59■■■□□ 2.01
DDR1-233ENST00000421124 STAG3Q9UJ98 1225 aa27.59■■■□□ 2.01
DDR1-233ENST00000421124 TMEM131LA2VDJ0 1609 aa27.56■■■□□ 2
DDR1-233ENST00000421124 NCKAP5LQ9HCH0 1330 aa27.55■■■□□ 2
DDR1-233ENST00000421124 CLTCL1P53675 1640 aa27.55■■■□□ 2
DDR1-233ENST00000421124 SLIT1O75093 1534 aa27.54■■■□□ 2
DDR1-233ENST00000421124 ARHGAP23Q9P227 1491 aa27.53■■■□□ 2
DDR1-233ENST00000421124 DMRT2Q9Y5R5 561 aa27.53■■■□□ 2
DDR1-233ENST00000421124 KIF1BO60333 1816 aa27.51■■□□□ 1.99
DDR1-233ENST00000421124 FOXD1Q16676 465 aa27.51■■□□□ 1.99
DDR1-233ENST00000421124 ANKLE2Q86XL3 938 aa27.51■■□□□ 1.99
DDR1-233ENST00000421124 NEURL4Q96JN8 1562 aa27.51■■□□□ 1.99
DDR1-233ENST00000421124 TMEM2Q9UHN6 1383 aa27.49■■□□□ 1.99
DDR1-233ENST00000421124 CHGAP10645 457 aaKnown RBP27.48■■□□□ 1.99
DDR1-233ENST00000421124 SCAF11Q99590 1463 aaKnown RBP27.46■■□□□ 1.99
DDR1-233ENST00000421124 MED14O60244 1454 aa27.44■■□□□ 1.98
DDR1-233ENST00000421124 EID1Q9Y6B2 187 aa27.44■■□□□ 1.98
DDR1-233ENST00000421124 IQGAP1P46940 1657 aa27.43■■□□□ 1.98
DDR1-233ENST00000421124 TXNDC2Q86VQ3 553 aa27.42■■□□□ 1.98
DDR1-233ENST00000421124 NPHP4O75161 1426 aaPredicted RBP27.41■■□□□ 1.98
DDR1-233ENST00000421124 LTKP29376 864 aa27.41■■□□□ 1.98
DDR1-233ENST00000421124 CCDC144AA2RUR9 1427 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms