RNA–Protein interactions for RNA: ENST00000421058.1

PUDPP1-201, Transcript of pseudouridine 5'-phosphatase pseudogene 1, humanhuman

BASIC

Gene PUDPP1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP1-201ENST00000421058 EIF2AK4Q9P2K8 1649 aaKnown RBP12.4□□□□□ -0.42
PUDPP1-201ENST00000421058 BCORL1Q5H9F3 1711 aa12.38□□□□□ -0.43
PUDPP1-201ENST00000421058 PLPPR3Q6T4P5 718 aa12.38□□□□□ -0.43
PUDPP1-201ENST00000421058 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
PUDPP1-201ENST00000421058 SETD5Q9C0A6 1442 aa12.37□□□□□ -0.43
PUDPP1-201ENST00000421058 KDM4FA0A1W2PPD8 638 aa12.36□□□□□ -0.43
PUDPP1-201ENST00000421058 FAM135AQ9P2D6 1515 aa12.36□□□□□ -0.43
PUDPP1-201ENST00000421058 NAIPQ13075 1403 aa12.36□□□□□ -0.43
PUDPP1-201ENST00000421058 NUP155O75694 1391 aa12.35□□□□□ -0.43
PUDPP1-201ENST00000421058 HRCP23327 699 aa12.35□□□□□ -0.43
PUDPP1-201ENST00000421058 ZMYM3Q14202 1370 aa12.33□□□□□ -0.44
PUDPP1-201ENST00000421058 FER1L4A9Z1Z3 1794 aa12.33□□□□□ -0.44
PUDPP1-201ENST00000421058 ADAMTSL3P82987 1691 aa12.32□□□□□ -0.44
PUDPP1-201ENST00000421058 KDM5DQ9BY66 1539 aa12.32□□□□□ -0.44
PUDPP1-201ENST00000421058 MADDQ8WXG6 1647 aa12.31□□□□□ -0.44
PUDPP1-201ENST00000421058 RNF17Q9BXT8 1623 aaKnown RBP12.31□□□□□ -0.44
PUDPP1-201ENST00000421058 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
PUDPP1-201ENST00000421058 GCC2Q8IWJ2 1684 aa12.31□□□□□ -0.44
PUDPP1-201ENST00000421058 RIMS1Q86UR5 1692 aaKnown RBP12.3□□□□□ -0.44
PUDPP1-201ENST00000421058 PTPRMP28827 1452 aa12.3□□□□□ -0.44
PUDPP1-201ENST00000421058 ZC3H13Q5T200 1668 aaKnown RBP12.29□□□□□ -0.44
PUDPP1-201ENST00000421058 SIGLEC1Q9BZZ2 1709 aa12.29□□□□□ -0.44
PUDPP1-201ENST00000421058 CEBPAP49715 358 aaPredicted RBP12.29□□□□□ -0.44
PUDPP1-201ENST00000421058 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
PUDPP1-201ENST00000421058 CLTCQ00610 1675 aaKnown RBP12.29□□□□□ -0.44
PUDPP1-201ENST00000421058 PRDM15P57071 1507 aaPredicted RBP12.28□□□□□ -0.44
PUDPP1-201ENST00000421058 PCGF6Q9BYE7 350 aa12.28□□□□□ -0.44
PUDPP1-201ENST00000421058 DEPDC5O75140 1603 aa12.27□□□□□ -0.44
PUDPP1-201ENST00000421058 MROH2AA6NES4 1674 aa12.27□□□□□ -0.45
PUDPP1-201ENST00000421058 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
PUDPP1-201ENST00000421058 ABCC3O15438 1527 aa12.27□□□□□ -0.45
PUDPP1-201ENST00000421058 UNC13BO14795 1591 aa12.26□□□□□ -0.45
PUDPP1-201ENST00000421058 MPHOSPH9Q99550 1183 aa12.25□□□□□ -0.45
PUDPP1-201ENST00000421058 SLC52A1Q9NWF4 448 aa12.25□□□□□ -0.45
PUDPP1-201ENST00000421058 NPATQ14207 1427 aa12.25□□□□□ -0.45
PUDPP1-201ENST00000421058 ARHGAP31Q2M1Z3 1444 aa12.25□□□□□ -0.45
PUDPP1-201ENST00000421058 LMTK2Q8IWU2 1503 aa12.25□□□□□ -0.45
PUDPP1-201ENST00000421058 PZPP20742 1482 aa12.24□□□□□ -0.45
PUDPP1-201ENST00000421058 PKD2Q13563 968 aa12.24□□□□□ -0.45
PUDPP1-201ENST00000421058 RPRD2Q5VT52 1461 aaKnown RBP12.24□□□□□ -0.45
PUDPP1-201ENST00000421058 TNRQ92752 1358 aa12.23□□□□□ -0.45
PUDPP1-201ENST00000421058 IQGAP3Q86VI3 1631 aa12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 UHRF1BP1Q6BDS2 1440 aa12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 SETD1BQ9UPS6 1966 aaKnown RBP12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 HDGFP51858 240 aaKnown RBP12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 CEP152O94986 1710 aa12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 TET3O43151 1660 aa12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 C3P01024 1663 aa12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 CAMSAP1Q5T5Y3 1602 aa12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 MROH1Q8NDA8 1641 aa12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 VWDEQ8N2E2 1590 aa12.22□□□□□ -0.45
PUDPP1-201ENST00000421058 THEMISQ8N1K5 641 aaPredicted RBP12.21□□□□□ -0.45
PUDPP1-201ENST00000421058 EFCAB6Q5THR3 1501 aa12.2□□□□□ -0.46
PUDPP1-201ENST00000421058 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
PUDPP1-201ENST00000421058 NLRP1Q9C000 1473 aa12.18□□□□□ -0.46
PUDPP1-201ENST00000421058 ERVK-7P63135 1459 aa12.17□□□□□ -0.46
PUDPP1-201ENST00000421058 CFAP65Q6ZU64 1925 aaKnown RBP12.17□□□□□ -0.46
PUDPP1-201ENST00000421058 EID1Q9Y6B2 187 aa12.16□□□□□ -0.46
PUDPP1-201ENST00000421058 SPATA31D1Q6ZQQ2 1576 aa12.15□□□□□ -0.46
PUDPP1-201ENST00000421058 IDI1Q13907 227 aa12.15□□□□□ -0.46
PUDPP1-201ENST00000421058 ZNF326Q5BKZ1 582 aaKnown RBP12.15□□□□□ -0.46
PUDPP1-201ENST00000421058 DMRT2Q9Y5R5 561 aa12.15□□□□□ -0.46
PUDPP1-201ENST00000421058 PREX1Q8TCU6 1659 aa12.15□□□□□ -0.46
PUDPP1-201ENST00000421058 NOS1P29475 1434 aa12.14□□□□□ -0.47
PUDPP1-201ENST00000421058 E9PCH4 1651 aa12.13□□□□□ -0.47
PUDPP1-201ENST00000421058 CCDC144AA2RUR9 1427 aa12.13□□□□□ -0.47
PUDPP1-201ENST00000421058 FOXD1Q16676 465 aa12.13□□□□□ -0.47
PUDPP1-201ENST00000421058 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
PUDPP1-201ENST00000421058 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.13□□□□□ -0.47
PUDPP1-201ENST00000421058 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
PUDPP1-201ENST00000421058 PTPRTO14522 1441 aa12.11□□□□□ -0.47
PUDPP1-201ENST00000421058 UGGT1Q9NYU2 1555 aa12.11□□□□□ -0.47
PUDPP1-201ENST00000421058 PPP1R15AO75807 674 aaPredicted RBP12.11□□□□□ -0.47
PUDPP1-201ENST00000421058 BCANQ96GW7 911 aa12.11□□□□□ -0.47
PUDPP1-201ENST00000421058 CEP170BQ9Y4F5 1589 aaPredicted RBP12.09□□□□□ -0.47
PUDPP1-201ENST00000421058 SPHKAPQ2M3C7 1700 aa12.09□□□□□ -0.47
PUDPP1-201ENST00000421058 MYO3AQ8NEV4 1616 aa12.09□□□□□ -0.47
PUDPP1-201ENST00000421058 HSPA2P54652 639 aa12.09□□□□□ -0.47
PUDPP1-201ENST00000421058 TXNDC2Q86VQ3 553 aa12.09□□□□□ -0.47
PUDPP1-201ENST00000421058 CCER1Q8TC90 406 aaPredicted RBP12.09□□□□□ -0.47
PUDPP1-201ENST00000421058 RPGRIP1LQ68CZ1 1315 aa12.09□□□□□ -0.47
PUDPP1-201ENST00000421058 TRPM2O94759 1503 aa12.08□□□□□ -0.48
PUDPP1-201ENST00000421058 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
PUDPP1-201ENST00000421058 RGL3Q3MIN7 710 aa12.07□□□□□ -0.48
PUDPP1-201ENST00000421058 STAC3Q96MF2 364 aa12.07□□□□□ -0.48
PUDPP1-201ENST00000421058 LMTK3Q96Q04 1460 aa12.07□□□□□ -0.48
PUDPP1-201ENST00000421058 ANKRD30BQ9BXX2 1392 aa12.06□□□□□ -0.48
PUDPP1-201ENST00000421058 SYNMO15061 1565 aa12.05□□□□□ -0.48
PUDPP1-201ENST00000421058 KIF1BO60333 1816 aa12.05□□□□□ -0.48
PUDPP1-201ENST00000421058 NEUROD1Q13562 356 aa12.05□□□□□ -0.48
PUDPP1-201ENST00000421058 KDM5AP29375 1690 aaKnown RBP12.05□□□□□ -0.48
PUDPP1-201ENST00000421058 ZNF142P52746 1687 aaPredicted RBP12.05□□□□□ -0.48
PUDPP1-201ENST00000421058 CLSPNQ9HAW4 1339 aa12.05□□□□□ -0.48
PUDPP1-201ENST00000421058 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
PUDPP1-201ENST00000421058 TMEM2Q9UHN6 1383 aa12.05□□□□□ -0.48
PUDPP1-201ENST00000421058 PIK3C2BO00750 1634 aa12.04□□□□□ -0.48
PUDPP1-201ENST00000421058 PLA2R1Q13018 1463 aa12.04□□□□□ -0.48
PUDPP1-201ENST00000421058 ADGRB3O60242 1522 aa12.04□□□□□ -0.48
PUDPP1-201ENST00000421058 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms