RNA–Protein interactions for RNA: ENST00000420421.1

PMS1-207, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-207ENST00000420421 FAM69CQ0P6D2 419 aa7.63□□□□□ -1.19
PMS1-207ENST00000420421 ZNF518AQ6AHZ1 1483 aa7.62□□□□□ -1.19
PMS1-207ENST00000420421 NAIPQ13075 1403 aa7.62□□□□□ -1.19
PMS1-207ENST00000420421 C9orf84Q5VXU9 1444 aa7.62□□□□□ -1.19
PMS1-207ENST00000420421 BBXQ8WY36 941 aaPredicted RBP7.62□□□□□ -1.19
PMS1-207ENST00000420421 ZNF219Q9P2Y4 722 aaPredicted RBP7.62□□□□□ -1.19
PMS1-207ENST00000420421 PPRC1Q5VV67 1664 aaKnown RBP7.62□□□□□ -1.19
PMS1-207ENST00000420421 SCAPERQ9BY12 1400 aa7.61□□□□□ -1.19
PMS1-207ENST00000420421 RAB3GAP2Q9H2M9 1393 aa7.61□□□□□ -1.19
PMS1-207ENST00000420421 PROM2Q8N271 834 aa7.61□□□□□ -1.19
PMS1-207ENST00000420421 DUOX2Q9NRD8 1548 aa7.61□□□□□ -1.19
PMS1-207ENST00000420421 ARHGEF12Q9NZN5 1544 aa7.61□□□□□ -1.19
PMS1-207ENST00000420421 DENND4BO75064 1496 aaPredicted RBP7.61□□□□□ -1.19
PMS1-207ENST00000420421 RICTORQ6R327 1708 aa7.61□□□□□ -1.19
PMS1-207ENST00000420421 KDM5CP41229 1560 aa7.6□□□□□ -1.19
PMS1-207ENST00000420421 PAXIP1Q6ZW49 1069 aaPredicted RBP7.6□□□□□ -1.19
PMS1-207ENST00000420421 CFAP44Q96MT7 982 aa7.6□□□□□ -1.19
PMS1-207ENST00000420421 MLH3Q9UHC1 1453 aa7.6□□□□□ -1.19
PMS1-207ENST00000420421 INO80Q9ULG1 1556 aaPredicted RBP7.59□□□□□ -1.19
PMS1-207ENST00000420421 KIDINS220Q9ULH0 1771 aa7.59□□□□□ -1.19
PMS1-207ENST00000420421 SPAG9O60271 1321 aaKnown RBP7.59□□□□□ -1.19
PMS1-207ENST00000420421 CHIC2Q9UKJ5 165 aa7.59□□□□□ -1.19
PMS1-207ENST00000420421 EIF2AK4Q9P2K8 1649 aaKnown RBP7.59□□□□□ -1.19
PMS1-207ENST00000420421 ATP7AQ04656 1500 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 MAGI2Q86UL8 1455 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 DCAF8L1A6NGE4 600 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 CCER1Q8TC90 406 aaPredicted RBP7.58□□□□□ -1.2
PMS1-207ENST00000420421 RRP7BPQ9NSQ0 103 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 U3KPZ7 1027 aaPredicted RBP7.58□□□□□ -1.2
PMS1-207ENST00000420421 POGZQ7Z3K3 1410 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 ERBINQ96RT1 1412 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 ANKRD50Q9ULJ7 1429 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 TRAPPC8Q9Y2L5 1435 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 HECW2Q9P2P5 1572 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 BCORL1Q5H9F3 1711 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 KIF15Q9NS87 1388 aa7.58□□□□□ -1.2
PMS1-207ENST00000420421 ZFYVE16Q7Z3T8 1539 aa7.57□□□□□ -1.2
PMS1-207ENST00000420421 ZMYM4Q5VZL5 1548 aa7.57□□□□□ -1.2
PMS1-207ENST00000420421 AFAP1Q8N556 730 aa7.56□□□□□ -1.2
PMS1-207ENST00000420421 KDM5DQ9BY66 1539 aa7.56□□□□□ -1.2
PMS1-207ENST00000420421 DHX57Q6P158 1386 aaKnown RBP7.56□□□□□ -1.2
PMS1-207ENST00000420421 TIMELESSQ9UNS1 1208 aa7.55□□□□□ -1.2
PMS1-207ENST00000420421 DHX29Q7Z478 1369 aaKnown RBP7.55□□□□□ -1.2
PMS1-207ENST00000420421 UNC13BO14795 1591 aa7.54□□□□□ -1.2
PMS1-207ENST00000420421 DEPDC5O75140 1603 aa7.54□□□□□ -1.2
PMS1-207ENST00000420421 REREQ9P2R6 1566 aa7.54□□□□□ -1.2
PMS1-207ENST00000420421 KDM6BO15054 1643 aa7.53□□□□□ -1.2
PMS1-207ENST00000420421 TRIM52Q96A61 297 aa7.53□□□□□ -1.2
PMS1-207ENST00000420421 IQGAP3Q86VI3 1631 aa7.52□□□□□ -1.2
PMS1-207ENST00000420421 FRMPD1Q5SYB0 1578 aa7.52□□□□□ -1.21
PMS1-207ENST00000420421 A2MP01023 1474 aa7.52□□□□□ -1.21
PMS1-207ENST00000420421 TULP1O00294 542 aaPredicted RBP7.52□□□□□ -1.21
PMS1-207ENST00000420421 MYT1LQ9UL68 1186 aa7.52□□□□□ -1.21
PMS1-207ENST00000420421 ABCA6Q8N139 1617 aa7.52□□□□□ -1.21
PMS1-207ENST00000420421 RNF17Q9BXT8 1623 aaKnown RBP7.52□□□□□ -1.21
PMS1-207ENST00000420421 FAM135AQ9P2D6 1515 aa7.52□□□□□ -1.21
PMS1-207ENST00000420421 DIP2CQ9Y2E4 1556 aa7.51□□□□□ -1.21
PMS1-207ENST00000420421 KANK1Q14678 1352 aa7.51□□□□□ -1.21
PMS1-207ENST00000420421 ECM2O94769 699 aaPredicted RBP7.51□□□□□ -1.21
PMS1-207ENST00000420421 MPHOSPH9Q99550 1183 aa7.51□□□□□ -1.21
PMS1-207ENST00000420421 ATP10AO60312 1499 aa7.5□□□□□ -1.21
PMS1-207ENST00000420421 NUP155O75694 1391 aa7.5□□□□□ -1.21
PMS1-207ENST00000420421 RAPGEF3O95398 923 aa7.5□□□□□ -1.21
PMS1-207ENST00000420421 TRHP20396 242 aaPredicted RBP7.5□□□□□ -1.21
PMS1-207ENST00000420421 MKRN4PQ13434 485 aaPredicted RBP7.5□□□□□ -1.21
PMS1-207ENST00000420421 AGLP35573 1532 aa7.5□□□□□ -1.21
PMS1-207ENST00000420421 TET3O43151 1660 aa7.5□□□□□ -1.21
PMS1-207ENST00000420421 ZC3H13Q5T200 1668 aaKnown RBP7.5□□□□□ -1.21
PMS1-207ENST00000420421 PRDM15P57071 1507 aaPredicted RBP7.49□□□□□ -1.21
PMS1-207ENST00000420421 NBR1Q14596 966 aa7.49□□□□□ -1.21
PMS1-207ENST00000420421 SPRYD3Q8NCJ5 442 aa7.49□□□□□ -1.21
PMS1-207ENST00000420421 DAXXQ9UER7 740 aaPredicted RBP7.49□□□□□ -1.21
PMS1-207ENST00000420421 VWDEQ8N2E2 1590 aa7.49□□□□□ -1.21
PMS1-207ENST00000420421 PZPP20742 1482 aa7.49□□□□□ -1.21
PMS1-207ENST00000420421 LMTK2Q8IWU2 1503 aa7.48□□□□□ -1.21
PMS1-207ENST00000420421 ARHGEF40Q8TER5 1519 aa7.48□□□□□ -1.21
PMS1-207ENST00000420421 TSHZ2Q9NRE2 1034 aa7.48□□□□□ -1.21
PMS1-207ENST00000420421 CFAP65Q6ZU64 1925 aaKnown RBP7.48□□□□□ -1.21
PMS1-207ENST00000420421 KIF3BO15066 747 aa7.47□□□□□ -1.21
PMS1-207ENST00000420421 KLHL34Q8N239 644 aa7.47□□□□□ -1.21
PMS1-207ENST00000420421 SPOCK2Q92563 424 aa7.47□□□□□ -1.21
PMS1-207ENST00000420421 ARXQ96QS3 562 aa7.47□□□□□ -1.21
PMS1-207ENST00000420421 MROH1Q8NDA8 1641 aa7.46□□□□□ -1.21
PMS1-207ENST00000420421 RPRD2Q5VT52 1461 aaKnown RBP7.46□□□□□ -1.22
PMS1-207ENST00000420421 COL17A1Q9UMD9 1497 aaPredicted RBP7.46□□□□□ -1.22
PMS1-207ENST00000420421 CEP152O94986 1710 aa7.46□□□□□ -1.22
PMS1-207ENST00000420421 SPHKAPQ2M3C7 1700 aa7.46□□□□□ -1.22
PMS1-207ENST00000420421 ANKRD30BQ9BXX2 1392 aa7.46□□□□□ -1.22
PMS1-207ENST00000420421 ERICH6Q7L0X2 663 aa7.45□□□□□ -1.22
PMS1-207ENST00000420421 GTF3C3Q9Y5Q9 886 aa7.45□□□□□ -1.22
PMS1-207ENST00000420421 E9PCH4 1651 aa7.44□□□□□ -1.22
PMS1-207ENST00000420421 YEATS2Q9ULM3 1422 aa7.44□□□□□ -1.22
PMS1-207ENST00000420421 KIF1BO60333 1816 aa7.44□□□□□ -1.22
PMS1-207ENST00000420421 STAC3Q96MF2 364 aa7.44□□□□□ -1.22
PMS1-207ENST00000420421 ARHGAP31Q2M1Z3 1444 aa7.44□□□□□ -1.22
PMS1-207ENST00000420421 NEURL4Q96JN8 1562 aa7.43□□□□□ -1.22
PMS1-207ENST00000420421 SETD1BQ9UPS6 1966 aaKnown RBP7.43□□□□□ -1.22
PMS1-207ENST00000420421 EFCAB6Q5THR3 1501 aa7.42□□□□□ -1.22
PMS1-207ENST00000420421 CAMSAP1Q5T5Y3 1602 aa7.42□□□□□ -1.22
PMS1-207ENST00000420421 MROH2AA6NES4 1674 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms