RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 ANKRD30AQ9BXX3 1397 aa25.41■■□□□ 1.66
SEC22C-206ENST00000420163 MROH1Q8NDA8 1641 aa25.41■■□□□ 1.66
SEC22C-206ENST00000420163 CEBPAP49715 358 aaPredicted RBP25.39■■□□□ 1.66
SEC22C-206ENST00000420163 CNTLNQ9NXG0 1405 aa25.38■■□□□ 1.65
SEC22C-206ENST00000420163 ERBINQ96RT1 1412 aa25.37■■□□□ 1.65
SEC22C-206ENST00000420163 ITGAEP38570 1179 aa25.35■■□□□ 1.65
SEC22C-206ENST00000420163 ESF1Q9H501 851 aaKnown RBP25.35■■□□□ 1.65
SEC22C-206ENST00000420163 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
SEC22C-206ENST00000420163 KDM5DQ9BY66 1539 aa25.34■■□□□ 1.65
SEC22C-206ENST00000420163 CEP152O94986 1710 aa25.33■■□□□ 1.65
SEC22C-206ENST00000420163 FAM135AQ9P2D6 1515 aa25.32■■□□□ 1.64
SEC22C-206ENST00000420163 ZMYM3Q14202 1370 aa25.31■■□□□ 1.64
SEC22C-206ENST00000420163 ZC3H13Q5T200 1668 aaKnown RBP25.3■■□□□ 1.64
SEC22C-206ENST00000420163 PRDM15P57071 1507 aaPredicted RBP25.3■■□□□ 1.64
SEC22C-206ENST00000420163 PREX1Q8TCU6 1659 aa25.29■■□□□ 1.64
SEC22C-206ENST00000420163 ABCC3O15438 1527 aa25.29■■□□□ 1.64
SEC22C-206ENST00000420163 PPP6R1Q9UPN7 881 aa25.29■■□□□ 1.64
SEC22C-206ENST00000420163 ROCK1Q13464 1354 aa25.29■■□□□ 1.64
SEC22C-206ENST00000420163 SETD1BQ9UPS6 1966 aaKnown RBP25.28■■□□□ 1.64
SEC22C-206ENST00000420163 LMTK3Q96Q04 1460 aa25.28■■□□□ 1.64
SEC22C-206ENST00000420163 ANKRD50Q9ULJ7 1429 aa25.26■■□□□ 1.63
SEC22C-206ENST00000420163 CAMSAP1Q5T5Y3 1602 aa25.24■■□□□ 1.63
SEC22C-206ENST00000420163 WASHC2CQ9Y4E1 1318 aa25.24■■□□□ 1.63
SEC22C-206ENST00000420163 VWDEQ8N2E2 1590 aa25.22■■□□□ 1.63
SEC22C-206ENST00000420163 CFAP65Q6ZU64 1925 aaKnown RBP25.2■■□□□ 1.62
SEC22C-206ENST00000420163 NPATQ14207 1427 aa25.2■■□□□ 1.62
SEC22C-206ENST00000420163 GCC2Q8IWJ2 1684 aa25.2■■□□□ 1.62
SEC22C-206ENST00000420163 UNC13BO14795 1591 aa25.19■■□□□ 1.62
SEC22C-206ENST00000420163 PZPP20742 1482 aa25.19■■□□□ 1.62
SEC22C-206ENST00000420163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.18■■□□□ 1.62
SEC22C-206ENST00000420163 MYO3AQ8NEV4 1616 aa25.18■■□□□ 1.62
SEC22C-206ENST00000420163 UHRF1BP1Q6BDS2 1440 aa25.15■■□□□ 1.62
SEC22C-206ENST00000420163 FBXO31Q5XUX0 539 aaPredicted RBP25.14■■□□□ 1.62
SEC22C-206ENST00000420163 LMTK2Q8IWU2 1503 aa25.13■■□□□ 1.61
SEC22C-206ENST00000420163 ZNF142P52746 1687 aaPredicted RBP25.13■■□□□ 1.61
SEC22C-206ENST00000420163 NAIPQ13075 1403 aa25.12■■□□□ 1.61
SEC22C-206ENST00000420163 HSPA2P54652 639 aa25.12■■□□□ 1.61
SEC22C-206ENST00000420163 KANK1Q14678 1352 aa25.12■■□□□ 1.61
SEC22C-206ENST00000420163 SPATA31D1Q6ZQQ2 1576 aa25.1■■□□□ 1.61
SEC22C-206ENST00000420163 EFCAB6Q5THR3 1501 aa25.09■■□□□ 1.61
SEC22C-206ENST00000420163 ERVK-7P63135 1459 aa25.09■■□□□ 1.61
SEC22C-206ENST00000420163 TET3O43151 1660 aa25.08■■□□□ 1.61
SEC22C-206ENST00000420163 HFM1A2PYH4 1435 aa25.08■■□□□ 1.61
SEC22C-206ENST00000420163 ARHGAP31Q2M1Z3 1444 aa25.08■■□□□ 1.61
SEC22C-206ENST00000420163 CEP170BQ9Y4F5 1589 aaPredicted RBP25.08■■□□□ 1.61
SEC22C-206ENST00000420163 IQGAP3Q86VI3 1631 aa25.08■■□□□ 1.6
SEC22C-206ENST00000420163 TNRQ92752 1358 aa25.07■■□□□ 1.6
SEC22C-206ENST00000420163 STRCQ7RTU9 1775 aa25.03■■□□□ 1.6
SEC22C-206ENST00000420163 E9PCH4 1651 aa25.01■■□□□ 1.59
SEC22C-206ENST00000420163 A2ML1A8K2U0 1454 aa25.01■■□□□ 1.59
SEC22C-206ENST00000420163 NUP155O75694 1391 aa24.99■■□□□ 1.59
SEC22C-206ENST00000420163 SYNMO15061 1565 aa24.98■■□□□ 1.59
SEC22C-206ENST00000420163 NLRP1Q9C000 1473 aa24.97■■□□□ 1.59
SEC22C-206ENST00000420163 RPRD2Q5VT52 1461 aaKnown RBP24.94■■□□□ 1.58
SEC22C-206ENST00000420163 NOS1P29475 1434 aa24.94■■□□□ 1.58
SEC22C-206ENST00000420163 UBR1Q8IWV7 1749 aa24.93■■□□□ 1.58
SEC22C-206ENST00000420163 PIK3C2BO00750 1634 aa24.92■■□□□ 1.58
SEC22C-206ENST00000420163 UGGT1Q9NYU2 1555 aa24.91■■□□□ 1.58
SEC22C-206ENST00000420163 PLA2R1Q13018 1463 aa24.88■■□□□ 1.57
SEC22C-206ENST00000420163 POLR1AO95602 1720 aaPredicted RBP24.87■■□□□ 1.57
SEC22C-206ENST00000420163 SPHKAPQ2M3C7 1700 aa24.86■■□□□ 1.57
SEC22C-206ENST00000420163 MYO5BQ9ULV0 1848 aa24.85■■□□□ 1.57
SEC22C-206ENST00000420163 SETD5Q9C0A6 1442 aa24.85■■□□□ 1.57
SEC22C-206ENST00000420163 TRIM52Q96A61 297 aa24.84■■□□□ 1.57
SEC22C-206ENST00000420163 KDM5AP29375 1690 aaKnown RBP24.83■■□□□ 1.57
SEC22C-206ENST00000420163 NCKAP5LQ9HCH0 1330 aa24.83■■□□□ 1.56
SEC22C-206ENST00000420163 NEURL4Q96JN8 1562 aa24.81■■□□□ 1.56
SEC22C-206ENST00000420163 IDI1Q13907 227 aa24.81■■□□□ 1.56
SEC22C-206ENST00000420163 ADGRB3O60242 1522 aa24.81■■□□□ 1.56
SEC22C-206ENST00000420163 THEMISQ8N1K5 641 aaPredicted RBP24.79■■□□□ 1.56
SEC22C-206ENST00000420163 RAB3GAP2Q9H2M9 1393 aa24.79■■□□□ 1.56
SEC22C-206ENST00000420163 PTPRTO14522 1441 aa24.77■■□□□ 1.56
SEC22C-206ENST00000420163 TMEM131LA2VDJ0 1609 aa24.76■■□□□ 1.55
SEC22C-206ENST00000420163 ARHGAP23Q9P227 1491 aa24.75■■□□□ 1.55
SEC22C-206ENST00000420163 SLIT1O75093 1534 aa24.75■■□□□ 1.55
SEC22C-206ENST00000420163 SLC52A1Q9NWF4 448 aa24.74■■□□□ 1.55
SEC22C-206ENST00000420163 CLTCL1P53675 1640 aa24.73■■□□□ 1.55
SEC22C-206ENST00000420163 TRPM2O94759 1503 aa24.73■■□□□ 1.55
SEC22C-206ENST00000420163 PKD2Q13563 968 aa24.73■■□□□ 1.55
SEC22C-206ENST00000420163 SLC4A1APQ9BWU0 796 aaKnown RBP24.73■■□□□ 1.55
SEC22C-206ENST00000420163 DMRT2Q9Y5R5 561 aa24.71■■□□□ 1.55
SEC22C-206ENST00000420163 IQGAP1P46940 1657 aa24.7■■□□□ 1.54
SEC22C-206ENST00000420163 STAG3Q9UJ98 1225 aa24.7■■□□□ 1.54
SEC22C-206ENST00000420163 ANKLE2Q86XL3 938 aa24.69■■□□□ 1.54
SEC22C-206ENST00000420163 TMEM2Q9UHN6 1383 aa24.68■■□□□ 1.54
SEC22C-206ENST00000420163 MED14O60244 1454 aa24.68■■□□□ 1.54
SEC22C-206ENST00000420163 SCAF11Q99590 1463 aaKnown RBP24.67■■□□□ 1.54
SEC22C-206ENST00000420163 FOXD1Q16676 465 aa24.67■■□□□ 1.54
SEC22C-206ENST00000420163 MPHOSPH9Q99550 1183 aa24.67■■□□□ 1.54
SEC22C-206ENST00000420163 NPHP4O75161 1426 aaPredicted RBP24.66■■□□□ 1.54
SEC22C-206ENST00000420163 KIF1BO60333 1816 aa24.65■■□□□ 1.54
SEC22C-206ENST00000420163 LTKP29376 864 aa24.65■■□□□ 1.54
SEC22C-206ENST00000420163 CHGAP10645 457 aaKnown RBP24.63■■□□□ 1.53
SEC22C-206ENST00000420163 ZFYVE9O95405 1425 aa24.62■■□□□ 1.53
SEC22C-206ENST00000420163 TXNDC2Q86VQ3 553 aa24.61■■□□□ 1.53
SEC22C-206ENST00000420163 ACIN1Q9UKV3 1341 aaKnown RBP24.61■■□□□ 1.53
SEC22C-206ENST00000420163 LTBP4Q8N2S1 1624 aa24.6■■□□□ 1.53
SEC22C-206ENST00000420163 RIMS2Q9UQ26 1411 aa24.59■■□□□ 1.53
SEC22C-206ENST00000420163 HRCP23327 699 aa24.57■■□□□ 1.52
SEC22C-206ENST00000420163 EID1Q9Y6B2 187 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms