RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 UNC13BO14795 1591 aa19.14■□□□□ 0.65
ATG4B-208ENST00000419606 DEPDC5O75140 1603 aa19.14■□□□□ 0.65
ATG4B-208ENST00000419606 RNF17Q9BXT8 1623 aaKnown RBP19.14■□□□□ 0.65
ATG4B-208ENST00000419606 GGT6Q6P531 493 aa19.13■□□□□ 0.65
ATG4B-208ENST00000419606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.651e-13■□□□□ 11.2
ATG4B-208ENST00000419606 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
ATG4B-208ENST00000419606 PRDM15P57071 1507 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-208ENST00000419606 NUP155O75694 1391 aa19.08■□□□□ 0.65
ATG4B-208ENST00000419606 HRCP23327 699 aa19.08■□□□□ 0.64
ATG4B-208ENST00000419606 CEP152O94986 1710 aa19.07■□□□□ 0.64
ATG4B-208ENST00000419606 PZPP20742 1482 aa19.07■□□□□ 0.64
ATG4B-208ENST00000419606 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
ATG4B-208ENST00000419606 IQGAP3Q86VI3 1631 aa19.06■□□□□ 0.64
ATG4B-208ENST00000419606 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
ATG4B-208ENST00000419606 FAM135AQ9P2D6 1515 aa19.04■□□□□ 0.64
ATG4B-208ENST00000419606 CLTCQ00610 1675 aaKnown RBP19.03■□□□□ 0.64
ATG4B-208ENST00000419606 ABCC3O15438 1527 aa19.03■□□□□ 0.64
ATG4B-208ENST00000419606 KANK1Q14678 1352 aa19.01■□□□□ 0.63
ATG4B-208ENST00000419606 WASHC2CQ9Y4E1 1318 aa19■□□□□ 0.63
ATG4B-208ENST00000419606 MPHOSPH9Q99550 1183 aa19■□□□□ 0.63
ATG4B-208ENST00000419606 ADAMTSL3P82987 1691 aa19■□□□□ 0.63
ATG4B-208ENST00000419606 FER1L4A9Z1Z3 1794 aa19■□□□□ 0.63
ATG4B-208ENST00000419606 MADDQ8WXG6 1647 aa19■□□□□ 0.63
ATG4B-208ENST00000419606 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
ATG4B-208ENST00000419606 ZC3H13Q5T200 1668 aaKnown RBP18.98■□□□□ 0.63
ATG4B-208ENST00000419606 DHX57Q6P158 1386 aaKnown RBP18.98■□□□□ 0.63
ATG4B-208ENST00000419606 FOXD1Q16676 465 aa18.98■□□□□ 0.63
ATG4B-208ENST00000419606 CAMSAP1Q5T5Y3 1602 aa18.98■□□□□ 0.63
ATG4B-208ENST00000419606 LMTK2Q8IWU2 1503 aa18.98■□□□□ 0.63
ATG4B-208ENST00000419606 TET3O43151 1660 aa18.98■□□□□ 0.63
ATG4B-208ENST00000419606 E9PCH4 1651 aa18.97■□□□□ 0.63
ATG4B-208ENST00000419606 RIMS1Q86UR5 1692 aaKnown RBP18.95■□□□□ 0.62
ATG4B-208ENST00000419606 EFCAB6Q5THR3 1501 aa18.95■□□□□ 0.62
ATG4B-208ENST00000419606 PKD2Q13563 968 aa18.95■□□□□ 0.62
ATG4B-208ENST00000419606 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
ATG4B-208ENST00000419606 PPP6R1Q9UPN7 881 aa18.95■□□□□ 0.62
ATG4B-208ENST00000419606 ACIN1Q9UKV3 1341 aaKnown RBP18.94■□□□□ 0.62
ATG4B-208ENST00000419606 ESF1Q9H501 851 aaKnown RBP18.93■□□□□ 0.62
ATG4B-208ENST00000419606 CFAP65Q6ZU64 1925 aaKnown RBP18.93■□□□□ 0.62
ATG4B-208ENST00000419606 NPATQ14207 1427 aa18.91■□□□□ 0.62
ATG4B-208ENST00000419606 MROH2AA6NES4 1674 aa18.91■□□□□ 0.62
ATG4B-208ENST00000419606 ZMYM3Q14202 1370 aa18.91■□□□□ 0.62
ATG4B-208ENST00000419606 C3P01024 1663 aa18.9■□□□□ 0.62
ATG4B-208ENST00000419606 KDM4FA0A1W2PPD8 638 aa18.9■□□□□ 0.62
ATG4B-208ENST00000419606 CEBPAP49715 358 aaPredicted RBP18.9■□□□□ 0.62
ATG4B-208ENST00000419606 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
ATG4B-208ENST00000419606 CNTLNQ9NXG0 1405 aa18.9■□□□□ 0.62
ATG4B-208ENST00000419606 FBXO31Q5XUX0 539 aaPredicted RBP18.89■□□□□ 0.61
ATG4B-208ENST00000419606 ARHGAP31Q2M1Z3 1444 aa18.88■□□□□ 0.61
ATG4B-208ENST00000419606 PREX1Q8TCU6 1659 aa18.86■□□□□ 0.61
ATG4B-208ENST00000419606 PLA2R1Q13018 1463 aa18.86■□□□□ 0.61
ATG4B-208ENST00000419606 SPHKAPQ2M3C7 1700 aa18.86■□□□□ 0.61
ATG4B-208ENST00000419606 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-208ENST00000419606 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
ATG4B-208ENST00000419606 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
ATG4B-208ENST00000419606 ANKRD30BQ9BXX2 1392 aa18.83■□□□□ 0.61
ATG4B-208ENST00000419606 SYNMO15061 1565 aa18.83■□□□□ 0.6
ATG4B-208ENST00000419606 PTPRMP28827 1452 aa18.83■□□□□ 0.6
ATG4B-208ENST00000419606 PTPRTO14522 1441 aa18.83■□□□□ 0.6
ATG4B-208ENST00000419606 UGGT1Q9NYU2 1555 aa18.82■□□□□ 0.6
ATG4B-208ENST00000419606 NOS1P29475 1434 aa18.82■□□□□ 0.6
ATG4B-208ENST00000419606 SPATA31D1Q6ZQQ2 1576 aa18.81■□□□□ 0.6
ATG4B-208ENST00000419606 SIN3AQ96ST3 1273 aa18.8■□□□□ 0.6
ATG4B-208ENST00000419606 TRPM2O94759 1503 aa18.79■□□□□ 0.6
ATG4B-208ENST00000419606 CLTCL1P53675 1640 aa18.78■□□□□ 0.6
ATG4B-208ENST00000419606 PIK3C2BO00750 1634 aa18.75■□□□□ 0.59
ATG4B-208ENST00000419606 TNRQ92752 1358 aa18.75■□□□□ 0.59
ATG4B-208ENST00000419606 NEUROD1Q13562 356 aa18.74■□□□□ 0.59
ATG4B-208ENST00000419606 IDI1Q13907 227 aa18.73■□□□□ 0.59
ATG4B-208ENST00000419606 CCDC144AA2RUR9 1427 aa18.72■□□□□ 0.59
ATG4B-208ENST00000419606 MYO3AQ8NEV4 1616 aa18.7■□□□□ 0.58
ATG4B-208ENST00000419606 MYO5BQ9ULV0 1848 aa18.69■□□□□ 0.58
ATG4B-208ENST00000419606 CLSPNQ9HAW4 1339 aa18.69■□□□□ 0.58
ATG4B-208ENST00000419606 KIF1BO60333 1816 aa18.68■□□□□ 0.58
ATG4B-208ENST00000419606 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
ATG4B-208ENST00000419606 CHGAP10645 457 aaKnown RBP18.67■□□□□ 0.58
ATG4B-208ENST00000419606 TMEM131LA2VDJ0 1609 aa18.66■□□□□ 0.58
ATG4B-208ENST00000419606 SPATA31E1Q6ZUB1 1445 aa18.65■□□□□ 0.58
ATG4B-208ENST00000419606 NLRP1Q9C000 1473 aa18.65■□□□□ 0.58
ATG4B-208ENST00000419606 ADGRB3O60242 1522 aa18.64■□□□□ 0.58
ATG4B-208ENST00000419606 UBR1Q8IWV7 1749 aa18.64■□□□□ 0.57
ATG4B-208ENST00000419606 RGL3Q3MIN7 710 aa18.64■□□□□ 0.57
ATG4B-208ENST00000419606 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.57
ATG4B-208ENST00000419606 CEP170BQ9Y4F5 1589 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-208ENST00000419606 A2ML1A8K2U0 1454 aa18.62■□□□□ 0.57
ATG4B-208ENST00000419606 ZNF142P52746 1687 aaPredicted RBP18.62■□□□□ 0.57
ATG4B-208ENST00000419606 STAG3Q9UJ98 1225 aa18.6■□□□□ 0.57
ATG4B-208ENST00000419606 UHRF1BP1Q6BDS2 1440 aa18.59■□□□□ 0.57
ATG4B-208ENST00000419606 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.57
ATG4B-208ENST00000419606 ZNF326Q5BKZ1 582 aaKnown RBP18.58■□□□□ 0.56
ATG4B-208ENST00000419606 L3MBTL2Q969R5 705 aa18.58■□□□□ 0.56
ATG4B-208ENST00000419606 NEURL4Q96JN8 1562 aa18.57■□□□□ 0.56
ATG4B-208ENST00000419606 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
ATG4B-208ENST00000419606 NUTM2DQ5VT03 806 aaPredicted RBP18.56■□□□□ 0.56
ATG4B-208ENST00000419606 IFT172Q9UG01 1749 aa18.56■□□□□ 0.56
ATG4B-208ENST00000419606 PPLO60437 1756 aa18.55■□□□□ 0.56
ATG4B-208ENST00000419606 NEXMIFQ5QGS0 1516 aa18.55■□□□□ 0.56
ATG4B-208ENST00000419606 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
ATG4B-208ENST00000419606 DCAF11Q8TEB1 546 aa18.54■□□□□ 0.56
ATG4B-208ENST00000419606 KDM2AQ9Y2K7 1162 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms