RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 MAGI2Q86UL8 1455 aa18.79■□□□□ 0.6
LINC00642-201ENST00000419459 ARHGEF40Q8TER5 1519 aa18.79■□□□□ 0.6
LINC00642-201ENST00000419459 DHX29Q7Z478 1369 aaKnown RBP18.79■□□□□ 0.6
LINC00642-201ENST00000419459 KIF3BO15066 747 aa18.78■□□□□ 0.6
LINC00642-201ENST00000419459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.6
LINC00642-201ENST00000419459 ATP10AO60312 1499 aa18.74■□□□□ 0.59
LINC00642-201ENST00000419459 DHX57Q6P158 1386 aaKnown RBP18.74■□□□□ 0.59
LINC00642-201ENST00000419459 EIF2AK4Q9P2K8 1649 aaKnown RBP18.73■□□□□ 0.59
LINC00642-201ENST00000419459 NUP155O75694 1391 aa18.73■□□□□ 0.59
LINC00642-201ENST00000419459 UNC13BO14795 1591 aa18.72■□□□□ 0.59
LINC00642-201ENST00000419459 GGT6Q6P531 493 aa18.72■□□□□ 0.59
LINC00642-201ENST00000419459 DEPDC5O75140 1603 aa18.71■□□□□ 0.59
LINC00642-201ENST00000419459 MROH1Q8NDA8 1641 aa18.71■□□□□ 0.59
LINC00642-201ENST00000419459 FOXD1Q16676 465 aa18.7■□□□□ 0.58
LINC00642-201ENST00000419459 PZPP20742 1482 aa18.7■□□□□ 0.58
LINC00642-201ENST00000419459 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
LINC00642-201ENST00000419459 FAM135AQ9P2D6 1515 aa18.68■□□□□ 0.58
LINC00642-201ENST00000419459 MLECQ14165 292 aa18.67■□□□□ 0.58
LINC00642-201ENST00000419459 MPHOSPH9Q99550 1183 aa18.67■□□□□ 0.58
LINC00642-201ENST00000419459 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
LINC00642-201ENST00000419459 BCORL1Q5H9F3 1711 aa18.67■□□□□ 0.58
LINC00642-201ENST00000419459 REREQ9P2R6 1566 aa18.67■□□□□ 0.58
LINC00642-201ENST00000419459 PRDM15P57071 1507 aaPredicted RBP18.67■□□□□ 0.58
LINC00642-201ENST00000419459 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
LINC00642-201ENST00000419459 IQGAP3Q86VI3 1631 aa18.66■□□□□ 0.58
LINC00642-201ENST00000419459 CEP152O94986 1710 aa18.66■□□□□ 0.58
LINC00642-201ENST00000419459 KDM5DQ9BY66 1539 aa18.65■□□□□ 0.58
LINC00642-201ENST00000419459 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
LINC00642-201ENST00000419459 AGLP35573 1532 aa18.62■□□□□ 0.57
LINC00642-201ENST00000419459 PKD2Q13563 968 aa18.62■□□□□ 0.57
LINC00642-201ENST00000419459 VWDEQ8N2E2 1590 aa18.61■□□□□ 0.57
LINC00642-201ENST00000419459 CFAP65Q6ZU64 1925 aaKnown RBP18.6■□□□□ 0.57
LINC00642-201ENST00000419459 KANK1Q14678 1352 aa18.6■□□□□ 0.57
LINC00642-201ENST00000419459 WASHC2CQ9Y4E1 1318 aa18.59■□□□□ 0.57
LINC00642-201ENST00000419459 E9PCH4 1651 aa18.58■□□□□ 0.57
LINC00642-201ENST00000419459 ABCC3O15438 1527 aa18.57■□□□□ 0.56
LINC00642-201ENST00000419459 TET3O43151 1660 aa18.57■□□□□ 0.56
LINC00642-201ENST00000419459 CLTCQ00610 1675 aaKnown RBP18.56■□□□□ 0.56
LINC00642-201ENST00000419459 SIN3AQ96ST3 1273 aa18.56■□□□□ 0.56
LINC00642-201ENST00000419459 CAMSAP1Q5T5Y3 1602 aa18.55■□□□□ 0.56
LINC00642-201ENST00000419459 EFCAB6Q5THR3 1501 aa18.54■□□□□ 0.56
LINC00642-201ENST00000419459 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
LINC00642-201ENST00000419459 LMTK2Q8IWU2 1503 aa18.51■□□□□ 0.55
LINC00642-201ENST00000419459 NPATQ14207 1427 aa18.51■□□□□ 0.55
LINC00642-201ENST00000419459 ANKRD30BQ9BXX2 1392 aa18.5■□□□□ 0.55
LINC00642-201ENST00000419459 FER1L4A9Z1Z3 1794 aa18.49■□□□□ 0.55
LINC00642-201ENST00000419459 SPHKAPQ2M3C7 1700 aa18.48■□□□□ 0.55
LINC00642-201ENST00000419459 PLA2R1Q13018 1463 aa18.48■□□□□ 0.55
LINC00642-201ENST00000419459 CLSPNQ9HAW4 1339 aa18.47■□□□□ 0.55
LINC00642-201ENST00000419459 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
LINC00642-201ENST00000419459 ESF1Q9H501 851 aaKnown RBP18.47■□□□□ 0.55
LINC00642-201ENST00000419459 MADDQ8WXG6 1647 aa18.46■□□□□ 0.55
LINC00642-201ENST00000419459 UGGT1Q9NYU2 1555 aa18.46■□□□□ 0.55
LINC00642-201ENST00000419459 FBXO31Q5XUX0 539 aaPredicted RBP18.44■□□□□ 0.54
LINC00642-201ENST00000419459 PREX1Q8TCU6 1659 aa18.42■□□□□ 0.54
LINC00642-201ENST00000419459 CEBPAP49715 358 aaPredicted RBP18.42■□□□□ 0.54
LINC00642-201ENST00000419459 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
LINC00642-201ENST00000419459 ZMYM3Q14202 1370 aa18.42■□□□□ 0.54
LINC00642-201ENST00000419459 RIMS1Q86UR5 1692 aaKnown RBP18.42■□□□□ 0.54
LINC00642-201ENST00000419459 RPRD2Q5VT52 1461 aaKnown RBP18.42■□□□□ 0.54
LINC00642-201ENST00000419459 CCDC144AA2RUR9 1427 aa18.41■□□□□ 0.54
LINC00642-201ENST00000419459 TRPM2O94759 1503 aa18.41■□□□□ 0.54
LINC00642-201ENST00000419459 CLTCL1P53675 1640 aa18.4■□□□□ 0.54
LINC00642-201ENST00000419459 C3P01024 1663 aa18.4■□□□□ 0.54
LINC00642-201ENST00000419459 ADAMTSL3P82987 1691 aa18.4■□□□□ 0.54
LINC00642-201ENST00000419459 SYNMO15061 1565 aa18.4■□□□□ 0.54
LINC00642-201ENST00000419459 PTPRTO14522 1441 aa18.39■□□□□ 0.54
LINC00642-201ENST00000419459 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.54
LINC00642-201ENST00000419459 MROH2AA6NES4 1674 aa18.38■□□□□ 0.53
LINC00642-201ENST00000419459 NOS1P29475 1434 aa18.37■□□□□ 0.53
LINC00642-201ENST00000419459 CNTLNQ9NXG0 1405 aa18.37■□□□□ 0.53
LINC00642-201ENST00000419459 ERVK-7P63135 1459 aa18.36■□□□□ 0.53
LINC00642-201ENST00000419459 RGL3Q3MIN7 710 aa18.34■□□□□ 0.53
LINC00642-201ENST00000419459 MIER1Q8N108 512 aa18.33■□□□□ 0.53
LINC00642-201ENST00000419459 TONSLQ96HA7 1378 aa18.33■□□□□ 0.53
LINC00642-201ENST00000419459 SPATA31D1Q6ZQQ2 1576 aa18.33■□□□□ 0.52
LINC00642-201ENST00000419459 PIK3C2BO00750 1634 aa18.31■□□□□ 0.52
LINC00642-201ENST00000419459 KIF1BO60333 1816 aa18.31■□□□□ 0.52
LINC00642-201ENST00000419459 MYO5BQ9ULV0 1848 aa18.31■□□□□ 0.52
LINC00642-201ENST00000419459 CHGAP10645 457 aaKnown RBP18.3■□□□□ 0.52
LINC00642-201ENST00000419459 IDI1Q13907 227 aa18.3■□□□□ 0.52
LINC00642-201ENST00000419459 L3MBTL2Q969R5 705 aa18.3■□□□□ 0.52
LINC00642-201ENST00000419459 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
LINC00642-201ENST00000419459 SPATA31E1Q6ZUB1 1445 aa18.27■□□□□ 0.52
LINC00642-201ENST00000419459 KDM4FA0A1W2PPD8 638 aa18.27■□□□□ 0.51
LINC00642-201ENST00000419459 PTPRMP28827 1452 aa18.27■□□□□ 0.51
LINC00642-201ENST00000419459 TNRQ92752 1358 aa18.26■□□□□ 0.51
LINC00642-201ENST00000419459 KDM2AQ9Y2K7 1162 aa18.25■□□□□ 0.51
LINC00642-201ENST00000419459 ADGRB3O60242 1522 aa18.25■□□□□ 0.51
LINC00642-201ENST00000419459 DCAF11Q8TEB1 546 aa18.24■□□□□ 0.51
LINC00642-201ENST00000419459 SLC52A1Q9NWF4 448 aa18.24■□□□□ 0.51
LINC00642-201ENST00000419459 ZNF326Q5BKZ1 582 aaKnown RBP18.23■□□□□ 0.51
LINC00642-201ENST00000419459 TMEM131LA2VDJ0 1609 aa18.23■□□□□ 0.51
LINC00642-201ENST00000419459 MYO3AQ8NEV4 1616 aa18.22■□□□□ 0.51
LINC00642-201ENST00000419459 NUTM2DQ5VT03 806 aaPredicted RBP18.22■□□□□ 0.51
LINC00642-201ENST00000419459 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
LINC00642-201ENST00000419459 STAG3Q9UJ98 1225 aa18.21■□□□□ 0.51
LINC00642-201ENST00000419459 PPP1R15AO75807 674 aaPredicted RBP18.19■□□□□ 0.5
LINC00642-201ENST00000419459 TIMELESSQ9UNS1 1208 aa18.19■□□□□ 0.5
LINC00642-201ENST00000419459 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms