RNA–Protein interactions for RNA: ENST00000419073.1

LST1-215, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 259 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-215ENST00000419073 CCNB3Q8WWL7 1395 aa24.86■■□□□ 1.57
LST1-215ENST00000419073 INO80Q9ULG1 1556 aaPredicted RBP24.85■■□□□ 1.57
LST1-215ENST00000419073 NEURL4Q96JN8 1562 aa24.84■■□□□ 1.57
LST1-215ENST00000419073 KIF3BO15066 747 aa24.82■■□□□ 1.56
LST1-215ENST00000419073 NPHP4O75161 1426 aaPredicted RBP24.82■■□□□ 1.56
LST1-215ENST00000419073 WASHC2CQ9Y4E1 1318 aa24.82■■□□□ 1.56
LST1-215ENST00000419073 VWDEQ8N2E2 1590 aa24.81■■□□□ 1.56
LST1-215ENST00000419073 DHX29Q7Z478 1369 aaKnown RBP24.8■■□□□ 1.56
LST1-215ENST00000419073 RGS17Q9UGC6 210 aaPredicted RBP24.8■■□□□ 1.56
LST1-215ENST00000419073 POLR1AO95602 1720 aaPredicted RBP24.8■■□□□ 1.56
LST1-215ENST00000419073 ZNF644Q9H582 1327 aaPredicted RBP24.8■■□□□ 1.56
LST1-215ENST00000419073 ALKQ9UM73 1620 aa24.78■■□□□ 1.56
LST1-215ENST00000419073 FYCO1Q9BQS8 1478 aa24.77■■□□□ 1.56
LST1-215ENST00000419073 MIA2Q96PC5 1412 aa24.77■■□□□ 1.56
LST1-215ENST00000419073 PZPP20742 1482 aa24.76■■□□□ 1.55
LST1-215ENST00000419073 ADGBQ8N7X0 1667 aa24.75■■□□□ 1.55
LST1-215ENST00000419073 MED14O60244 1454 aa24.75■■□□□ 1.55
LST1-215ENST00000419073 FAM135AQ9P2D6 1515 aa24.75■■□□□ 1.55
LST1-215ENST00000419073 UGGT1Q9NYU2 1555 aa24.72■■□□□ 1.55
LST1-215ENST00000419073 NLRP1Q9C000 1473 aa24.72■■□□□ 1.55
LST1-215ENST00000419073 RTEL1-TNFRSF6BF6WH68 1400 aa24.72■■□□□ 1.55
LST1-215ENST00000419073 LRRC7Q96NW7 1537 aa24.71■■□□□ 1.55
LST1-215ENST00000419073 MTUS2Q5JR59 1369 aa24.71■■□□□ 1.55
LST1-215ENST00000419073 KDM5DQ9BY66 1539 aa24.69■■□□□ 1.54
LST1-215ENST00000419073 MBD5Q9P267 1494 aa24.69■■□□□ 1.54
LST1-215ENST00000419073 DEPDC5O75140 1603 aa24.67■■□□□ 1.54
LST1-215ENST00000419073 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
LST1-215ENST00000419073 POTEAQ6S8J7 498 aa24.65■■□□□ 1.54
LST1-215ENST00000419073 IQGAP1P46940 1657 aa24.62■■□□□ 1.53
LST1-215ENST00000419073 RNF17Q9BXT8 1623 aaKnown RBP24.62■■□□□ 1.53
LST1-215ENST00000419073 RSPH4AQ5TD94 716 aa24.59■■□□□ 1.53
LST1-215ENST00000419073 STRCP1A6NGW2 1772 aa24.58■■□□□ 1.53
LST1-215ENST00000419073 SYNMO15061 1565 aa24.56■■□□□ 1.52
LST1-215ENST00000419073 TSPY4P0CV99 314 aa24.55■■□□□ 1.52
LST1-215ENST00000419073 TSPY10P0CW01 314 aa24.55■■□□□ 1.52
LST1-215ENST00000419073 CCDC141Q6ZP82 1450 aa24.55■■□□□ 1.52
LST1-215ENST00000419073 TXNDC2Q86VQ3 553 aa24.54■■□□□ 1.52
LST1-215ENST00000419073 TIAM1Q13009 1591 aa24.54■■□□□ 1.52
LST1-215ENST00000419073 FAM135BQ49AJ0 1406 aa24.52■■□□□ 1.52
LST1-215ENST00000419073 LTKP29376 864 aa24.51■■□□□ 1.51
LST1-215ENST00000419073 EID1Q9Y6B2 187 aa24.49■■□□□ 1.51
LST1-215ENST00000419073 SCAF11Q99590 1463 aaKnown RBP24.49■■□□□ 1.51
LST1-215ENST00000419073 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
LST1-215ENST00000419073 ERVK-7P63135 1459 aa24.45■■□□□ 1.51
LST1-215ENST00000419073 EHBP1L1Q8N3D4 1523 aa24.44■■□□□ 1.5
LST1-215ENST00000419073 CAMSAP2Q08AD1 1489 aa24.44■■□□□ 1.5
LST1-215ENST00000419073 ABCC3O15438 1527 aa24.43■■□□□ 1.5
LST1-215ENST00000419073 ZC3H13Q5T200 1668 aaKnown RBP24.42■■□□□ 1.5
LST1-215ENST00000419073 TMEM94Q12767 1356 aa24.42■■□□□ 1.5
LST1-215ENST00000419073 PROSER2Q86WR7 435 aaPredicted RBP24.4■■□□□ 1.5
LST1-215ENST00000419073 NCOA2Q15596 1464 aa24.39■■□□□ 1.5
LST1-215ENST00000419073 RBM33Q96EV2 1170 aaKnown RBP24.39■■□□□ 1.49
LST1-215ENST00000419073 STAG3Q9UJ98 1225 aa24.39■■□□□ 1.49
LST1-215ENST00000419073 KCNA6P17658 529 aa24.37■■□□□ 1.49
LST1-215ENST00000419073 ARHGAP23Q9P227 1491 aa24.36■■□□□ 1.49
LST1-215ENST00000419073 SLIT1O75093 1534 aa24.35■■□□□ 1.49
LST1-215ENST00000419073 UBR1Q8IWV7 1749 aa24.35■■□□□ 1.49
LST1-215ENST00000419073 XIRP1Q702N8 1843 aaKnown RBP24.33■■□□□ 1.49
LST1-215ENST00000419073 UPF1Q92900 1129 aaKnown RBP eCLIP24.33■■□□□ 1.49
LST1-215ENST00000419073 SLC26A8Q96RN1 970 aa24.32■■□□□ 1.48
LST1-215ENST00000419073 JCADQ9P266 1359 aa24.31■■□□□ 1.48
LST1-215ENST00000419073 TMEM2Q9UHN6 1383 aa24.31■■□□□ 1.48
LST1-215ENST00000419073 ARHGEF5Q12774 1597 aa24.31■■□□□ 1.48
LST1-215ENST00000419073 SLAIN2Q9P270 581 aa24.31■■□□□ 1.48
LST1-215ENST00000419073 ROBO1Q9Y6N7 1651 aa24.3■■□□□ 1.48
LST1-215ENST00000419073 SETD1AO15047 1707 aaKnown RBP24.3■■□□□ 1.48
LST1-215ENST00000419073 TRIM52Q96A61 297 aa24.29■■□□□ 1.48
LST1-215ENST00000419073 MEX3CQ5U5Q3 659 aaKnown RBP24.28■■□□□ 1.48
LST1-215ENST00000419073 CFAP65Q6ZU64 1925 aaKnown RBP24.27■■□□□ 1.48
LST1-215ENST00000419073 LRRC9Q6ZRR7 1453 aa24.27■■□□□ 1.48
LST1-215ENST00000419073 SRCAPQ6ZRS2 3230 aa24.27■■□□□ 1.48
LST1-215ENST00000419073 BCANQ96GW7 911 aa24.27■■□□□ 1.48
LST1-215ENST00000419073 ZNF772Q68DY9 489 aaPredicted RBP24.26■■□□□ 1.47
LST1-215ENST00000419073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.26■■□□□ 1.47
LST1-215ENST00000419073 MSH6P52701 1360 aa24.26■■□□□ 1.47
LST1-215ENST00000419073 ARHGAP31Q2M1Z3 1444 aa24.24■■□□□ 1.47
LST1-215ENST00000419073 MROH1Q8NDA8 1641 aa24.22■■□□□ 1.47
LST1-215ENST00000419073 EIF2AK4Q9P2K8 1649 aaKnown RBP24.22■■□□□ 1.47
LST1-215ENST00000419073 MAP3K1Q13233 1512 aa24.21■■□□□ 1.47
LST1-215ENST00000419073 IDI1Q13907 227 aa24.21■■□□□ 1.47
LST1-215ENST00000419073 CEP152O94986 1710 aa24.21■■□□□ 1.47
LST1-215ENST00000419073 PRDM15P57071 1507 aaPredicted RBP24.2■■□□□ 1.46
LST1-215ENST00000419073 SPATA31A6Q5VVP1 1343 aa24.19■■□□□ 1.46
LST1-215ENST00000419073 MAST1Q9Y2H9 1570 aa24.19■■□□□ 1.46
LST1-215ENST00000419073 RXRBP28702 533 aa24.18■■□□□ 1.46
LST1-215ENST00000419073 PHLPP1O60346 1717 aa24.17■■□□□ 1.46
LST1-215ENST00000419073 PIK3C2BO00750 1634 aa24.17■■□□□ 1.46
LST1-215ENST00000419073 RRP7BPQ9NSQ0 103 aa24.16■■□□□ 1.46
LST1-215ENST00000419073 EFCAB6Q5THR3 1501 aa24.15■■□□□ 1.46
LST1-215ENST00000419073 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
LST1-215ENST00000419073 NKTRP30414 1462 aaKnown RBP24.14■■□□□ 1.46
LST1-215ENST00000419073 TET3O43151 1660 aa24.14■■□□□ 1.45
LST1-215ENST00000419073 KANK1Q14678 1352 aa24.14■■□□□ 1.45
LST1-215ENST00000419073 C14orf37Q86TY3 774 aa24.13■■□□□ 1.45
LST1-215ENST00000419073 KIF15Q9NS87 1388 aa24.12■■□□□ 1.45
LST1-215ENST00000419073 LRP6O75581 1613 aa24.11■■□□□ 1.45
LST1-215ENST00000419073 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
LST1-215ENST00000419073 FGD6Q6ZV73 1430 aa24.1■■□□□ 1.45
LST1-215ENST00000419073 NUTM2BA6NNL0 878 aaPredicted RBP24.08■■□□□ 1.45
LST1-215ENST00000419073 NUTM2EB1AL46 878 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms