RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 TRIM52Q96A61 297 aa19.34■□□□□ 0.69
SEC22C-205ENST00000417572 EIF2AK4Q9P2K8 1649 aaKnown RBP19.33■□□□□ 0.68
SEC22C-205ENST00000417572 NUP155O75694 1391 aa19.3■□□□□ 0.68
SEC22C-205ENST00000417572 BCORL1Q5H9F3 1711 aa19.29■□□□□ 0.68
SEC22C-205ENST00000417572 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
SEC22C-205ENST00000417572 RNF17Q9BXT8 1623 aaKnown RBP19.27■□□□□ 0.67
SEC22C-205ENST00000417572 KANK1Q14678 1352 aa19.26■□□□□ 0.67
SEC22C-205ENST00000417572 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
SEC22C-205ENST00000417572 DEPDC5O75140 1603 aa19.25■□□□□ 0.67
SEC22C-205ENST00000417572 MROH1Q8NDA8 1641 aa19.25■□□□□ 0.67
SEC22C-205ENST00000417572 WASHC2CQ9Y4E1 1318 aa19.25■□□□□ 0.67
SEC22C-205ENST00000417572 UNC13BO14795 1591 aa19.25■□□□□ 0.67
SEC22C-205ENST00000417572 PRDM15P57071 1507 aaPredicted RBP19.23■□□□□ 0.67
SEC22C-205ENST00000417572 MPHOSPH9Q99550 1183 aa19.22■□□□□ 0.67
SEC22C-205ENST00000417572 SLC4A1APQ9BWU0 796 aaKnown RBP19.21■□□□□ 0.67
SEC22C-205ENST00000417572 VWDEQ8N2E2 1590 aa19.21■□□□□ 0.67
SEC22C-205ENST00000417572 ESF1Q9H501 851 aaKnown RBP19.2■□□□□ 0.66
SEC22C-205ENST00000417572 PZPP20742 1482 aa19.2■□□□□ 0.66
SEC22C-205ENST00000417572 KDM5DQ9BY66 1539 aa19.2■□□□□ 0.66
SEC22C-205ENST00000417572 FAM135AQ9P2D6 1515 aa19.19■□□□□ 0.66
SEC22C-205ENST00000417572 ABCC3O15438 1527 aa19.18■□□□□ 0.66
SEC22C-205ENST00000417572 IQGAP3Q86VI3 1631 aa19.17■□□□□ 0.66
SEC22C-205ENST00000417572 PKD2Q13563 968 aa19.16■□□□□ 0.66
SEC22C-205ENST00000417572 LMTK2Q8IWU2 1503 aa19.16■□□□□ 0.66
SEC22C-205ENST00000417572 FOXD1Q16676 465 aa19.15■□□□□ 0.66
SEC22C-205ENST00000417572 DHX57Q6P158 1386 aaKnown RBP19.14■□□□□ 0.65
SEC22C-205ENST00000417572 CEP152O94986 1710 aa19.14■□□□□ 0.65
SEC22C-205ENST00000417572 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
SEC22C-205ENST00000417572 ZMYM3Q14202 1370 aa19.13■□□□□ 0.65
SEC22C-205ENST00000417572 ADAMTSL3P82987 1691 aa19.13■□□□□ 0.65
SEC22C-205ENST00000417572 CLTCQ00610 1675 aaKnown RBP19.12■□□□□ 0.65
SEC22C-205ENST00000417572 ZC3H13Q5T200 1668 aaKnown RBP19.12■□□□□ 0.65
SEC22C-205ENST00000417572 TET3O43151 1660 aa19.11■□□□□ 0.65
SEC22C-205ENST00000417572 KDM4FA0A1W2PPD8 638 aa19.1■□□□□ 0.65
SEC22C-205ENST00000417572 MADDQ8WXG6 1647 aa19.1■□□□□ 0.65
SEC22C-205ENST00000417572 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
SEC22C-205ENST00000417572 NPATQ14207 1427 aa19.09■□□□□ 0.65
SEC22C-205ENST00000417572 ARHGAP31Q2M1Z3 1444 aa19.09■□□□□ 0.65
SEC22C-205ENST00000417572 EFCAB6Q5THR3 1501 aa19.09■□□□□ 0.65
SEC22C-205ENST00000417572 CAMSAP1Q5T5Y3 1602 aa19.09■□□□□ 0.65
SEC22C-205ENST00000417572 FBXO31Q5XUX0 539 aaPredicted RBP19.09■□□□□ 0.65
SEC22C-205ENST00000417572 FER1L4A9Z1Z3 1794 aa19.09■□□□□ 0.65
SEC22C-205ENST00000417572 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
SEC22C-205ENST00000417572 E9PCH4 1651 aa19.06■□□□□ 0.64
SEC22C-205ENST00000417572 RIMS1Q86UR5 1692 aaKnown RBP19.05■□□□□ 0.64
SEC22C-205ENST00000417572 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
SEC22C-205ENST00000417572 RPRD2Q5VT52 1461 aaKnown RBP19.05■□□□□ 0.64
SEC22C-205ENST00000417572 MROH2AA6NES4 1674 aa19.04■□□□□ 0.64
SEC22C-205ENST00000417572 ANKRD30BQ9BXX2 1392 aa19.02■□□□□ 0.64
SEC22C-205ENST00000417572 PTPRTO14522 1441 aa19.02■□□□□ 0.63
SEC22C-205ENST00000417572 PTPRMP28827 1452 aa19.01■□□□□ 0.63
SEC22C-205ENST00000417572 PLA2R1Q13018 1463 aa19.01■□□□□ 0.63
SEC22C-205ENST00000417572 NOS1P29475 1434 aa19■□□□□ 0.63
SEC22C-205ENST00000417572 ERVK-7P63135 1459 aa19■□□□□ 0.63
SEC22C-205ENST00000417572 C3P01024 1663 aa19■□□□□ 0.63
SEC22C-205ENST00000417572 CFAP65Q6ZU64 1925 aaKnown RBP18.98■□□□□ 0.63
SEC22C-205ENST00000417572 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
SEC22C-205ENST00000417572 PREX1Q8TCU6 1659 aa18.97■□□□□ 0.63
SEC22C-205ENST00000417572 SPATA31D1Q6ZQQ2 1576 aa18.96■□□□□ 0.63
SEC22C-205ENST00000417572 TNRQ92752 1358 aa18.96■□□□□ 0.63
SEC22C-205ENST00000417572 CLSPNQ9HAW4 1339 aa18.95■□□□□ 0.62
SEC22C-205ENST00000417572 IDI1Q13907 227 aa18.95■□□□□ 0.62
SEC22C-205ENST00000417572 SLC52A1Q9NWF4 448 aa18.95■□□□□ 0.62
SEC22C-205ENST00000417572 SPHKAPQ2M3C7 1700 aa18.94■□□□□ 0.62
SEC22C-205ENST00000417572 SYNMO15061 1565 aa18.94■□□□□ 0.62
SEC22C-205ENST00000417572 TRPM2O94759 1503 aa18.94■□□□□ 0.62
SEC22C-205ENST00000417572 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
SEC22C-205ENST00000417572 CCDC144AA2RUR9 1427 aa18.93■□□□□ 0.62
SEC22C-205ENST00000417572 UGGT1Q9NYU2 1555 aa18.92■□□□□ 0.62
SEC22C-205ENST00000417572 CLTCL1P53675 1640 aa18.89■□□□□ 0.61
SEC22C-205ENST00000417572 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
SEC22C-205ENST00000417572 PIK3C2BO00750 1634 aa18.87■□□□□ 0.61
SEC22C-205ENST00000417572 NLRP1Q9C000 1473 aa18.86■□□□□ 0.61
SEC22C-205ENST00000417572 STAG3Q9UJ98 1225 aa18.85■□□□□ 0.61
SEC22C-205ENST00000417572 RGL3Q3MIN7 710 aa18.84■□□□□ 0.61
SEC22C-205ENST00000417572 SETD1BQ9UPS6 1966 aaKnown RBP18.82■□□□□ 0.6
SEC22C-205ENST00000417572 SPATA31E1Q6ZUB1 1445 aa18.81■□□□□ 0.6
SEC22C-205ENST00000417572 MYO3AQ8NEV4 1616 aa18.81■□□□□ 0.6
SEC22C-205ENST00000417572 UHRF1BP1Q6BDS2 1440 aa18.81■□□□□ 0.6
SEC22C-205ENST00000417572 A2ML1A8K2U0 1454 aa18.8■□□□□ 0.6
SEC22C-205ENST00000417572 ZNF326Q5BKZ1 582 aaKnown RBP18.8■□□□□ 0.6
SEC22C-205ENST00000417572 TMEM131LA2VDJ0 1609 aa18.79■□□□□ 0.6
SEC22C-205ENST00000417572 THEMISQ8N1K5 641 aaPredicted RBP18.79■□□□□ 0.6
SEC22C-205ENST00000417572 KIF1BO60333 1816 aa18.78■□□□□ 0.6
SEC22C-205ENST00000417572 L3MBTL2Q969R5 705 aa18.78■□□□□ 0.6
SEC22C-205ENST00000417572 ADGRB3O60242 1522 aa18.78■□□□□ 0.6
SEC22C-205ENST00000417572 CEP170BQ9Y4F5 1589 aaPredicted RBP18.77■□□□□ 0.6
SEC22C-205ENST00000417572 TONSLQ96HA7 1378 aa18.77■□□□□ 0.6
SEC22C-205ENST00000417572 NEURL4Q96JN8 1562 aa18.75■□□□□ 0.59
SEC22C-205ENST00000417572 DCAF11Q8TEB1 546 aa18.75■□□□□ 0.59
SEC22C-205ENST00000417572 UBR1Q8IWV7 1749 aa18.75■□□□□ 0.59
SEC22C-205ENST00000417572 RPGRIP1LQ68CZ1 1315 aa18.75■□□□□ 0.59
SEC22C-205ENST00000417572 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
SEC22C-205ENST00000417572 KDM2AQ9Y2K7 1162 aa18.74■□□□□ 0.59
SEC22C-205ENST00000417572 NUTM2DQ5VT03 806 aaPredicted RBP18.74■□□□□ 0.59
SEC22C-205ENST00000417572 TMEM2Q9UHN6 1383 aa18.73■□□□□ 0.59
SEC22C-205ENST00000417572 KDM5AP29375 1690 aaKnown RBP18.72■□□□□ 0.59
SEC22C-205ENST00000417572 ZNF142P52746 1687 aaPredicted RBP18.72■□□□□ 0.59
SEC22C-205ENST00000417572 MYO5BQ9ULV0 1848 aa18.72■□□□□ 0.59
SEC22C-205ENST00000417572 RIMS2Q9UQ26 1411 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms