RNA–Protein interactions for RNA: ENST00000417512.1

SDCCAG3-205, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-205ENST00000417512 INO80Q9ULG1 1556 aaPredicted RBP20.05■□□□□ 0.8
SDCCAG3-205ENST00000417512 ZNF142P52746 1687 aaPredicted RBP20.04■□□□□ 0.8
SDCCAG3-205ENST00000417512 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
SDCCAG3-205ENST00000417512 RSPH4AQ5TD94 716 aa20.03■□□□□ 0.8
SDCCAG3-205ENST00000417512 PHF23Q9BUL5 403 aaPredicted RBP20.03■□□□□ 0.8
SDCCAG3-205ENST00000417512 SHANK2Q9UPX8 1470 aa20.02■□□□□ 0.8
SDCCAG3-205ENST00000417512 MBD5Q9P267 1494 aa20.01■□□□□ 0.79
SDCCAG3-205ENST00000417512 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.01■□□□□ 0.79
SDCCAG3-205ENST00000417512 DNMT1P26358 1616 aaKnown RBP20.01■□□□□ 0.79
SDCCAG3-205ENST00000417512 LOC105371045A0A1W2PR82 267 aa20■□□□□ 0.79
SDCCAG3-205ENST00000417512 CPS1P31327 1500 aa20■□□□□ 0.79
SDCCAG3-205ENST00000417512 ADGBQ8N7X0 1667 aa19.98■□□□□ 0.79
SDCCAG3-205ENST00000417512 TSPY4P0CV99 314 aa19.98■□□□□ 0.79
SDCCAG3-205ENST00000417512 TSPY10P0CW01 314 aa19.98■□□□□ 0.79
SDCCAG3-205ENST00000417512 MIA2Q96PC5 1412 aa19.98■□□□□ 0.79
SDCCAG3-205ENST00000417512 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
SDCCAG3-205ENST00000417512 PZPP20742 1482 aa19.94■□□□□ 0.78
SDCCAG3-205ENST00000417512 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
SDCCAG3-205ENST00000417512 FAM135AQ9P2D6 1515 aa19.92■□□□□ 0.78
SDCCAG3-205ENST00000417512 MED1Q15648 1581 aaPredicted RBP19.92■□□□□ 0.78
SDCCAG3-205ENST00000417512 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
SDCCAG3-205ENST00000417512 KDM5DQ9BY66 1539 aa19.92■□□□□ 0.78
SDCCAG3-205ENST00000417512 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
SDCCAG3-205ENST00000417512 NLRP1Q9C000 1473 aa19.91■□□□□ 0.78
SDCCAG3-205ENST00000417512 CCDC141Q6ZP82 1450 aa19.9■□□□□ 0.78
SDCCAG3-205ENST00000417512 UGGT1Q9NYU2 1555 aa19.9■□□□□ 0.78
SDCCAG3-205ENST00000417512 NEURL4Q96JN8 1562 aa19.89■□□□□ 0.77
SDCCAG3-205ENST00000417512 EHBP1L1Q8N3D4 1523 aa19.88■□□□□ 0.77
SDCCAG3-205ENST00000417512 MED14O60244 1454 aa19.87■□□□□ 0.77
SDCCAG3-205ENST00000417512 VWDEQ8N2E2 1590 aa19.85■□□□□ 0.77
SDCCAG3-205ENST00000417512 POLR1AO95602 1720 aaPredicted RBP19.84■□□□□ 0.77
SDCCAG3-205ENST00000417512 CAMSAP2Q08AD1 1489 aa19.84■□□□□ 0.77
SDCCAG3-205ENST00000417512 NCOA2Q15596 1464 aa19.83■□□□□ 0.76
SDCCAG3-205ENST00000417512 TXNDC2Q86VQ3 553 aa19.81■□□□□ 0.76
SDCCAG3-205ENST00000417512 LRRC7Q96NW7 1537 aa19.8■□□□□ 0.76
SDCCAG3-205ENST00000417512 DEPDC5O75140 1603 aa19.8■□□□□ 0.76
SDCCAG3-205ENST00000417512 EID1Q9Y6B2 187 aa19.78■□□□□ 0.76
SDCCAG3-205ENST00000417512 LTKP29376 864 aa19.76■□□□□ 0.75
SDCCAG3-205ENST00000417512 ALKQ9UM73 1620 aa19.76■□□□□ 0.75
SDCCAG3-205ENST00000417512 STAG3Q9UJ98 1225 aa19.74■□□□□ 0.75
SDCCAG3-205ENST00000417512 IQGAP1P46940 1657 aa19.74■□□□□ 0.75
SDCCAG3-205ENST00000417512 RGS17Q9UGC6 210 aaPredicted RBP19.73■□□□□ 0.75
SDCCAG3-205ENST00000417512 ARHGEF5Q12774 1597 aa19.73■□□□□ 0.75
SDCCAG3-205ENST00000417512 ERVK-7P63135 1459 aa19.73■□□□□ 0.75
SDCCAG3-205ENST00000417512 ABCC3O15438 1527 aa19.72■□□□□ 0.75
SDCCAG3-205ENST00000417512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.74
SDCCAG3-205ENST00000417512 SCAF11Q99590 1463 aaKnown RBP19.7■□□□□ 0.74
SDCCAG3-205ENST00000417512 RNF17Q9BXT8 1623 aaKnown RBP19.67■□□□□ 0.74
SDCCAG3-205ENST00000417512 PROSER2Q86WR7 435 aaPredicted RBP19.66■□□□□ 0.74
SDCCAG3-205ENST00000417512 RRP7BPQ9NSQ0 103 aa19.66■□□□□ 0.74
SDCCAG3-205ENST00000417512 SYNMO15061 1565 aa19.65■□□□□ 0.74
SDCCAG3-205ENST00000417512 STRCP1A6NGW2 1772 aa19.65■□□□□ 0.74
SDCCAG3-205ENST00000417512 KANK4Q5T7N3 995 aaPredicted RBP19.64■□□□□ 0.73
SDCCAG3-205ENST00000417512 FAM135BQ49AJ0 1406 aa19.64■□□□□ 0.73
SDCCAG3-205ENST00000417512 LRRC9Q6ZRR7 1453 aa19.64■□□□□ 0.73
SDCCAG3-205ENST00000417512 ZC3H13Q5T200 1668 aaKnown RBP19.63■□□□□ 0.73
SDCCAG3-205ENST00000417512 MYOM3Q5VTT5 1437 aa19.63■□□□□ 0.73
SDCCAG3-205ENST00000417512 KCNA6P17658 529 aa19.63■□□□□ 0.73
SDCCAG3-205ENST00000417512 TMEM2Q9UHN6 1383 aa19.62■□□□□ 0.73
SDCCAG3-205ENST00000417512 POTEAQ6S8J7 498 aa19.62■□□□□ 0.73
SDCCAG3-205ENST00000417512 BCANQ96GW7 911 aa19.62■□□□□ 0.73
SDCCAG3-205ENST00000417512 SLC26A8Q96RN1 970 aa19.62■□□□□ 0.73
SDCCAG3-205ENST00000417512 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
SDCCAG3-205ENST00000417512 ARHGAP23Q9P227 1491 aa19.61■□□□□ 0.73
SDCCAG3-205ENST00000417512 ARHGAP31Q2M1Z3 1444 aa19.61■□□□□ 0.73
SDCCAG3-205ENST00000417512 TMEM94Q12767 1356 aa19.61■□□□□ 0.73
SDCCAG3-205ENST00000417512 KANK1Q14678 1352 aa19.61■□□□□ 0.73
SDCCAG3-205ENST00000417512 RBM33Q96EV2 1170 aaKnown RBP19.61■□□□□ 0.73
SDCCAG3-205ENST00000417512 SLIT1O75093 1534 aa19.61■□□□□ 0.73
SDCCAG3-205ENST00000417512 DUOX2Q9NRD8 1548 aa19.61■□□□□ 0.73
SDCCAG3-205ENST00000417512 IDI1Q13907 227 aa19.6■□□□□ 0.73
SDCCAG3-205ENST00000417512 EIF2AK4Q9P2K8 1649 aaKnown RBP19.6■□□□□ 0.73
SDCCAG3-205ENST00000417512 KIF15Q9NS87 1388 aa19.59■□□□□ 0.73
SDCCAG3-205ENST00000417512 UBR1Q8IWV7 1749 aa19.59■□□□□ 0.73
SDCCAG3-205ENST00000417512 MROH1Q8NDA8 1641 aa19.56■□□□□ 0.72
SDCCAG3-205ENST00000417512 VPS8Q8N3P4 1428 aa19.56■□□□□ 0.72
SDCCAG3-205ENST00000417512 TRIM26Q12899 539 aaPredicted RBP19.55■□□□□ 0.72
SDCCAG3-205ENST00000417512 ERBINQ96RT1 1412 aa19.54■□□□□ 0.72
SDCCAG3-205ENST00000417512 APLP2Q06481 763 aa19.54■□□□□ 0.72
SDCCAG3-205ENST00000417512 SLAIN2Q9P270 581 aa19.54■□□□□ 0.72
SDCCAG3-205ENST00000417512 CFAP65Q6ZU64 1925 aaKnown RBP19.53■□□□□ 0.72
SDCCAG3-205ENST00000417512 CHIC2Q9UKJ5 165 aa19.53■□□□□ 0.72
SDCCAG3-205ENST00000417512 CEP152O94986 1710 aa19.53■□□□□ 0.72
SDCCAG3-205ENST00000417512 ABCC5O15440 1437 aa19.51■□□□□ 0.71
SDCCAG3-205ENST00000417512 HDGFP51858 240 aaKnown RBP19.51■□□□□ 0.71
SDCCAG3-205ENST00000417512 SLC52A1Q9NWF4 448 aa19.51■□□□□ 0.71
SDCCAG3-205ENST00000417512 MSH6P52701 1360 aa19.51■□□□□ 0.71
SDCCAG3-205ENST00000417512 EFCAB6Q5THR3 1501 aa19.49■□□□□ 0.71
SDCCAG3-205ENST00000417512 PRDM15P57071 1507 aaPredicted RBP19.48■□□□□ 0.71
SDCCAG3-205ENST00000417512 PIK3C2BO00750 1634 aa19.47■□□□□ 0.71
SDCCAG3-205ENST00000417512 ANKRD30AQ9BXX3 1397 aa19.47■□□□□ 0.71
SDCCAG3-205ENST00000417512 MAP3K1Q13233 1512 aa19.47■□□□□ 0.71
SDCCAG3-205ENST00000417512 PPP1R15AO75807 674 aaPredicted RBP19.47■□□□□ 0.71
SDCCAG3-205ENST00000417512 JCADQ9P266 1359 aa19.45■□□□□ 0.7
SDCCAG3-205ENST00000417512 C14orf37Q86TY3 774 aa19.45■□□□□ 0.7
SDCCAG3-205ENST00000417512 XIRP1Q702N8 1843 aaKnown RBP19.44■□□□□ 0.7
SDCCAG3-205ENST00000417512 DAPK1P53355 1430 aa19.44■□□□□ 0.7
SDCCAG3-205ENST00000417512 MEX3CQ5U5Q3 659 aaKnown RBP19.44■□□□□ 0.7
SDCCAG3-205ENST00000417512 TET3O43151 1660 aa19.43■□□□□ 0.7
SDCCAG3-205ENST00000417512 ROBO1Q9Y6N7 1651 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms