RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 ESF1Q9H501 851 aaKnown RBP26.58■■□□□ 1.85
COMMD3-BMI1-201ENST00000417470 FER1L4A9Z1Z3 1794 aa26.58■■□□□ 1.85
COMMD3-BMI1-201ENST00000417470 ANKRD50Q9ULJ7 1429 aa26.56■■□□□ 1.84
COMMD3-BMI1-201ENST00000417470 RNF17Q9BXT8 1623 aaKnown RBP26.56■■□□□ 1.84
COMMD3-BMI1-201ENST00000417470 RIMS1Q86UR5 1692 aaKnown RBP26.54■■□□□ 1.84
COMMD3-BMI1-201ENST00000417470 KDM5DQ9BY66 1539 aa26.49■■□□□ 1.83
COMMD3-BMI1-201ENST00000417470 ZMYM3Q14202 1370 aa26.49■■□□□ 1.83
COMMD3-BMI1-201ENST00000417470 WASHC2CQ9Y4E1 1318 aa26.49■■□□□ 1.83
COMMD3-BMI1-201ENST00000417470 MROH2AA6NES4 1674 aa26.49■■□□□ 1.83
COMMD3-BMI1-201ENST00000417470 MROH1Q8NDA8 1641 aa26.49■■□□□ 1.83
COMMD3-BMI1-201ENST00000417470 DEPDC5O75140 1603 aa26.47■■□□□ 1.83
COMMD3-BMI1-201ENST00000417470 PRDM15P57071 1507 aaPredicted RBP26.47■■□□□ 1.83
COMMD3-BMI1-201ENST00000417470 HFM1A2PYH4 1435 aa26.46■■□□□ 1.83
COMMD3-BMI1-201ENST00000417470 NAIPQ13075 1403 aa26.46■■□□□ 1.83
COMMD3-BMI1-201ENST00000417470 CLTCQ00610 1675 aaKnown RBP26.44■■□□□ 1.82
COMMD3-BMI1-201ENST00000417470 CEBPAP49715 358 aaPredicted RBP26.43■■□□□ 1.82
COMMD3-BMI1-201ENST00000417470 KANK1Q14678 1352 aa26.43■■□□□ 1.82
COMMD3-BMI1-201ENST00000417470 ABCC3O15438 1527 aa26.42■■□□□ 1.82
COMMD3-BMI1-201ENST00000417470 VWDEQ8N2E2 1590 aa26.41■■□□□ 1.82
COMMD3-BMI1-201ENST00000417470 ZC3H13Q5T200 1668 aaKnown RBP26.41■■□□□ 1.82
COMMD3-BMI1-201ENST00000417470 C3P01024 1663 aa26.41■■□□□ 1.82
COMMD3-BMI1-201ENST00000417470 LMTK2Q8IWU2 1503 aa26.39■■□□□ 1.81
COMMD3-BMI1-201ENST00000417470 NPATQ14207 1427 aa26.39■■□□□ 1.81
COMMD3-BMI1-201ENST00000417470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.38■■□□□ 1.81
COMMD3-BMI1-201ENST00000417470 GCC2Q8IWJ2 1684 aa26.37■■□□□ 1.81
COMMD3-BMI1-201ENST00000417470 ARHGAP31Q2M1Z3 1444 aa26.36■■□□□ 1.81
COMMD3-BMI1-201ENST00000417470 UNC13BO14795 1591 aa26.36■■□□□ 1.81
COMMD3-BMI1-201ENST00000417470 PZPP20742 1482 aa26.36■■□□□ 1.81
COMMD3-BMI1-201ENST00000417470 SETD1BQ9UPS6 1966 aaKnown RBP26.35■■□□□ 1.81
COMMD3-BMI1-201ENST00000417470 PLPPR3Q6T4P5 718 aa26.33■■□□□ 1.81
COMMD3-BMI1-201ENST00000417470 ACIN1Q9UKV3 1341 aaKnown RBP26.3■■□□□ 1.8
COMMD3-BMI1-201ENST00000417470 CEP152O94986 1710 aa26.29■■□□□ 1.8
COMMD3-BMI1-201ENST00000417470 NUP155O75694 1391 aa26.29■■□□□ 1.8
COMMD3-BMI1-201ENST00000417470 CAMSAP1Q5T5Y3 1602 aa26.28■■□□□ 1.8
COMMD3-BMI1-201ENST00000417470 FBXO31Q5XUX0 539 aaPredicted RBP26.26■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 IQGAP3Q86VI3 1631 aa26.25■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 SETD5Q9C0A6 1442 aa26.25■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 EFCAB6Q5THR3 1501 aa26.24■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 UHRF1BP1Q6BDS2 1440 aa26.23■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 SPATA31D1Q6ZQQ2 1576 aa26.23■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 RPRD2Q5VT52 1461 aaKnown RBP26.23■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 LMTK3Q96Q04 1460 aa26.23■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 PREX1Q8TCU6 1659 aa26.22■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 ERVK-7P63135 1459 aa26.22■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 TET3O43151 1660 aa26.22■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 TNRQ92752 1358 aa26.21■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 HRCP23327 699 aa26.21■■□□□ 1.79
COMMD3-BMI1-201ENST00000417470 NOS1P29475 1434 aa26.17■■□□□ 1.78
COMMD3-BMI1-201ENST00000417470 NLRP1Q9C000 1473 aa26.16■■□□□ 1.78
COMMD3-BMI1-201ENST00000417470 TRIM26Q12899 539 aaPredicted RBP26.15■■□□□ 1.78
COMMD3-BMI1-201ENST00000417470 TRIM52Q96A61 297 aa26.15■■□□□ 1.78
COMMD3-BMI1-201ENST00000417470 RAB3GAP2Q9H2M9 1393 aa26.14■■□□□ 1.78
COMMD3-BMI1-201ENST00000417470 MYO3AQ8NEV4 1616 aa26.13■■□□□ 1.77
COMMD3-BMI1-201ENST00000417470 A2ML1A8K2U0 1454 aa26.12■■□□□ 1.77
COMMD3-BMI1-201ENST00000417470 ZNF142P52746 1687 aaPredicted RBP26.1■■□□□ 1.77
COMMD3-BMI1-201ENST00000417470 E9PCH4 1651 aa26.09■■□□□ 1.77
COMMD3-BMI1-201ENST00000417470 CEP170BQ9Y4F5 1589 aaPredicted RBP26.09■■□□□ 1.77
COMMD3-BMI1-201ENST00000417470 SLC52A1Q9NWF4 448 aa26.09■■□□□ 1.77
COMMD3-BMI1-201ENST00000417470 SLC4A1APQ9BWU0 796 aaKnown RBP26.08■■□□□ 1.77
COMMD3-BMI1-201ENST00000417470 CFAP65Q6ZU64 1925 aaKnown RBP26.08■■□□□ 1.76
COMMD3-BMI1-201ENST00000417470 HSPA2P54652 639 aa26.06■■□□□ 1.76
COMMD3-BMI1-201ENST00000417470 PTPRTO14522 1441 aa26.05■■□□□ 1.76
COMMD3-BMI1-201ENST00000417470 MPHOSPH9Q99550 1183 aa26.05■■□□□ 1.76
COMMD3-BMI1-201ENST00000417470 SYNMO15061 1565 aa26.04■■□□□ 1.76
COMMD3-BMI1-201ENST00000417470 PKD2Q13563 968 aa26.04■■□□□ 1.76
COMMD3-BMI1-201ENST00000417470 IDI1Q13907 227 aa26.03■■□□□ 1.76
COMMD3-BMI1-201ENST00000417470 THEMISQ8N1K5 641 aaPredicted RBP26.03■■□□□ 1.76
COMMD3-BMI1-201ENST00000417470 UGGT1Q9NYU2 1555 aa26.01■■□□□ 1.75
COMMD3-BMI1-201ENST00000417470 PLA2R1Q13018 1463 aa26■■□□□ 1.75
COMMD3-BMI1-201ENST00000417470 KDM5AP29375 1690 aaKnown RBP25.96■■□□□ 1.75
COMMD3-BMI1-201ENST00000417470 PIK3C2BO00750 1634 aa25.96■■□□□ 1.75
COMMD3-BMI1-201ENST00000417470 SPHKAPQ2M3C7 1700 aa25.94■■□□□ 1.74
COMMD3-BMI1-201ENST00000417470 UBR1Q8IWV7 1749 aa25.93■■□□□ 1.74
COMMD3-BMI1-201ENST00000417470 TRPM2O94759 1503 aa25.93■■□□□ 1.74
COMMD3-BMI1-201ENST00000417470 STAG3Q9UJ98 1225 aa25.91■■□□□ 1.74
COMMD3-BMI1-201ENST00000417470 DMRT2Q9Y5R5 561 aa25.91■■□□□ 1.74
COMMD3-BMI1-201ENST00000417470 ADGRB3O60242 1522 aa25.89■■□□□ 1.74
COMMD3-BMI1-201ENST00000417470 SLIT1O75093 1534 aa25.89■■□□□ 1.74
COMMD3-BMI1-201ENST00000417470 ANKLE2Q86XL3 938 aa25.89■■□□□ 1.74
COMMD3-BMI1-201ENST00000417470 ARHGAP23Q9P227 1491 aa25.89■■□□□ 1.73
COMMD3-BMI1-201ENST00000417470 STRCQ7RTU9 1775 aa25.89■■□□□ 1.73
COMMD3-BMI1-201ENST00000417470 TMEM2Q9UHN6 1383 aa25.87■■□□□ 1.73
COMMD3-BMI1-201ENST00000417470 FOXD1Q16676 465 aa25.87■■□□□ 1.73
COMMD3-BMI1-201ENST00000417470 TMEM131LA2VDJ0 1609 aa25.85■■□□□ 1.73
COMMD3-BMI1-201ENST00000417470 NCKAP5LQ9HCH0 1330 aa25.85■■□□□ 1.73
COMMD3-BMI1-201ENST00000417470 MED14O60244 1454 aa25.82■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 CLTCL1P53675 1640 aa25.81■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 HDGFP51858 240 aaKnown RBP25.8■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 EID1Q9Y6B2 187 aa25.8■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 CHGAP10645 457 aaKnown RBP25.79■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 LTKP29376 864 aa25.79■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 TXNDC2Q86VQ3 553 aa25.79■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 ANKRD30BQ9BXX2 1392 aa25.79■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 CCDC144AA2RUR9 1427 aa25.79■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 SCAF11Q99590 1463 aaKnown RBP25.79■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 ZFYVE9O95405 1425 aa25.78■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 NEURL4Q96JN8 1562 aa25.77■■□□□ 1.72
COMMD3-BMI1-201ENST00000417470 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.76■■□□□ 1.71
COMMD3-BMI1-201ENST00000417470 POLR1AO95602 1720 aaPredicted RBP25.76■■□□□ 1.71
COMMD3-BMI1-201ENST00000417470 NPHP4O75161 1426 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms