RNA–Protein interactions for RNA: ENST00000417410.6

SMIM19-203, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM19, Length 1,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-203ENST00000417410 ERBINQ96RT1 1412 aa33.4■■■□□ 2.94
SMIM19-203ENST00000417410 ROCK1Q13464 1354 aa33.37■■■□□ 2.93
SMIM19-203ENST00000417410 RNF17Q9BXT8 1623 aaKnown RBP33.32■■■□□ 2.92
SMIM19-203ENST00000417410 PLPPR3Q6T4P5 718 aa33.31■■■□□ 2.92
SMIM19-203ENST00000417410 FAM135AQ9P2D6 1515 aa33.31■■■□□ 2.92
SMIM19-203ENST00000417410 MROH2AA6NES4 1674 aa33.31■■■□□ 2.92
SMIM19-203ENST00000417410 CLTCQ00610 1675 aaKnown RBP33.29■■■□□ 2.92
SMIM19-203ENST00000417410 CEBPAP49715 358 aaPredicted RBP33.29■■■□□ 2.92
SMIM19-203ENST00000417410 ZMYM3Q14202 1370 aa33.28■■■□□ 2.92
SMIM19-203ENST00000417410 ANKRD50Q9ULJ7 1429 aa33.27■■■□□ 2.92
SMIM19-203ENST00000417410 WASHC2CQ9Y4E1 1318 aa33.27■■■□□ 2.92
SMIM19-203ENST00000417410 C3P01024 1663 aa33.26■■■□□ 2.92
SMIM19-203ENST00000417410 KDM5DQ9BY66 1539 aa33.25■■■□□ 2.91
SMIM19-203ENST00000417410 MROH1Q8NDA8 1641 aa33.21■■■□□ 2.91
SMIM19-203ENST00000417410 SETD1BQ9UPS6 1966 aaKnown RBP33.2■■■□□ 2.9
SMIM19-203ENST00000417410 DEPDC5O75140 1603 aa33.19■■■□□ 2.9
SMIM19-203ENST00000417410 PRDM15P57071 1507 aaPredicted RBP33.18■■■□□ 2.9
SMIM19-203ENST00000417410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.18■■■□□ 2.9
SMIM19-203ENST00000417410 ZC3H13Q5T200 1668 aaKnown RBP33.18■■■□□ 2.9
SMIM19-203ENST00000417410 KANK1Q14678 1352 aa33.17■■■□□ 2.9
SMIM19-203ENST00000417410 ABCC3O15438 1527 aa33.15■■■□□ 2.9
SMIM19-203ENST00000417410 NPATQ14207 1427 aa33.13■■■□□ 2.89
SMIM19-203ENST00000417410 CEP152O94986 1710 aa33.1■■■□□ 2.89
SMIM19-203ENST00000417410 PZPP20742 1482 aa33.08■■■□□ 2.89
SMIM19-203ENST00000417410 VWDEQ8N2E2 1590 aa33.07■■■□□ 2.88
SMIM19-203ENST00000417410 NAIPQ13075 1403 aa33.06■■■□□ 2.88
SMIM19-203ENST00000417410 PREX1Q8TCU6 1659 aa33.06■■■□□ 2.88
SMIM19-203ENST00000417410 HFM1A2PYH4 1435 aa33.06■■■□□ 2.88
SMIM19-203ENST00000417410 CAMSAP1Q5T5Y3 1602 aa33.04■■■□□ 2.88
SMIM19-203ENST00000417410 GCC2Q8IWJ2 1684 aa33.04■■■□□ 2.88
SMIM19-203ENST00000417410 LMTK3Q96Q04 1460 aa33.03■■■□□ 2.88
SMIM19-203ENST00000417410 UNC13BO14795 1591 aa33.03■■■□□ 2.88
SMIM19-203ENST00000417410 LMTK2Q8IWU2 1503 aa33.03■■■□□ 2.88
SMIM19-203ENST00000417410 UHRF1BP1Q6BDS2 1440 aa33.02■■■□□ 2.88
SMIM19-203ENST00000417410 FBXO31Q5XUX0 539 aaPredicted RBP33.01■■■□□ 2.88
SMIM19-203ENST00000417410 ARHGAP31Q2M1Z3 1444 aa33■■■□□ 2.87
SMIM19-203ENST00000417410 TRIM26Q12899 539 aaPredicted RBP32.97■■■□□ 2.87
SMIM19-203ENST00000417410 TNRQ92752 1358 aa32.95■■■□□ 2.87
SMIM19-203ENST00000417410 NUP155O75694 1391 aa32.94■■■□□ 2.86
SMIM19-203ENST00000417410 CFAP65Q6ZU64 1925 aaKnown RBP32.94■■■□□ 2.86
SMIM19-203ENST00000417410 SPATA31D1Q6ZQQ2 1576 aa32.91■■■□□ 2.86
SMIM19-203ENST00000417410 IQGAP3Q86VI3 1631 aa32.91■■■□□ 2.86
SMIM19-203ENST00000417410 ERVK-7P63135 1459 aa32.91■■■□□ 2.86
SMIM19-203ENST00000417410 TET3O43151 1660 aa32.9■■■□□ 2.86
SMIM19-203ENST00000417410 EFCAB6Q5THR3 1501 aa32.9■■■□□ 2.86
SMIM19-203ENST00000417410 MYO3AQ8NEV4 1616 aa32.89■■■□□ 2.86
SMIM19-203ENST00000417410 HSPA2P54652 639 aa32.89■■■□□ 2.86
SMIM19-203ENST00000417410 PCGF6Q9BYE7 350 aa32.87■■■□□ 2.85
SMIM19-203ENST00000417410 RPRD2Q5VT52 1461 aaKnown RBP32.85■■■□□ 2.85
SMIM19-203ENST00000417410 ZNF142P52746 1687 aaPredicted RBP32.84■■■□□ 2.85
SMIM19-203ENST00000417410 NLRP1Q9C000 1473 aa32.84■■■□□ 2.85
SMIM19-203ENST00000417410 CEP170BQ9Y4F5 1589 aaPredicted RBP32.83■■■□□ 2.85
SMIM19-203ENST00000417410 A2ML1A8K2U0 1454 aa32.82■■■□□ 2.85
SMIM19-203ENST00000417410 TRIM52Q96A61 297 aa32.82■■■□□ 2.84
SMIM19-203ENST00000417410 SETD5Q9C0A6 1442 aa32.81■■■□□ 2.84
SMIM19-203ENST00000417410 ACIN1Q9UKV3 1341 aaKnown RBP32.81■■■□□ 2.84
SMIM19-203ENST00000417410 NOS1P29475 1434 aa32.77■■■□□ 2.84
SMIM19-203ENST00000417410 E9PCH4 1651 aa32.75■■■□□ 2.83
SMIM19-203ENST00000417410 THEMISQ8N1K5 641 aaPredicted RBP32.71■■■□□ 2.83
SMIM19-203ENST00000417410 UGGT1Q9NYU2 1555 aa32.71■■■□□ 2.83
SMIM19-203ENST00000417410 SYNMO15061 1565 aa32.69■■■□□ 2.82
SMIM19-203ENST00000417410 SLC52A1Q9NWF4 448 aa32.69■■■□□ 2.82
SMIM19-203ENST00000417410 SLC4A1APQ9BWU0 796 aaKnown RBP32.67■■■□□ 2.82
SMIM19-203ENST00000417410 RAB3GAP2Q9H2M9 1393 aa32.67■■■□□ 2.82
SMIM19-203ENST00000417410 PLA2R1Q13018 1463 aa32.67■■■□□ 2.82
SMIM19-203ENST00000417410 IDI1Q13907 227 aa32.67■■■□□ 2.82
SMIM19-203ENST00000417410 STRCQ7RTU9 1775 aa32.64■■■□□ 2.82
SMIM19-203ENST00000417410 HRCP23327 699 aa32.63■■■□□ 2.81
SMIM19-203ENST00000417410 PKD2Q13563 968 aa32.63■■■□□ 2.81
SMIM19-203ENST00000417410 DMRT2Q9Y5R5 561 aa32.63■■■□□ 2.81
SMIM19-203ENST00000417410 STAG3Q9UJ98 1225 aa32.61■■■□□ 2.81
SMIM19-203ENST00000417410 UBR1Q8IWV7 1749 aa32.61■■■□□ 2.81
SMIM19-203ENST00000417410 PIK3C2BO00750 1634 aa32.61■■■□□ 2.81
SMIM19-203ENST00000417410 MPHOSPH9Q99550 1183 aa32.59■■■□□ 2.81
SMIM19-203ENST00000417410 PTPRTO14522 1441 aa32.58■■■□□ 2.81
SMIM19-203ENST00000417410 KDM5AP29375 1690 aaKnown RBP32.58■■■□□ 2.81
SMIM19-203ENST00000417410 SPHKAPQ2M3C7 1700 aa32.57■■■□□ 2.8
SMIM19-203ENST00000417410 NCKAP5LQ9HCH0 1330 aa32.56■■■□□ 2.8
SMIM19-203ENST00000417410 ANKLE2Q86XL3 938 aa32.55■■■□□ 2.8
SMIM19-203ENST00000417410 ADGRB3O60242 1522 aa32.51■■■□□ 2.79
SMIM19-203ENST00000417410 POLR1AO95602 1720 aaPredicted RBP32.48■■■□□ 2.79
SMIM19-203ENST00000417410 SLIT1O75093 1534 aa32.48■■■□□ 2.79
SMIM19-203ENST00000417410 TRPM2O94759 1503 aa32.48■■■□□ 2.79
SMIM19-203ENST00000417410 ARHGAP23Q9P227 1491 aa32.47■■■□□ 2.79
SMIM19-203ENST00000417410 TMEM2Q9UHN6 1383 aa32.46■■■□□ 2.79
SMIM19-203ENST00000417410 CHGAP10645 457 aaKnown RBP32.45■■■□□ 2.79
SMIM19-203ENST00000417410 TMEM131LA2VDJ0 1609 aa32.45■■■□□ 2.78
SMIM19-203ENST00000417410 FOXD1Q16676 465 aa32.44■■■□□ 2.78
SMIM19-203ENST00000417410 EID1Q9Y6B2 187 aa32.44■■■□□ 2.78
SMIM19-203ENST00000417410 TXNDC2Q86VQ3 553 aa32.42■■■□□ 2.78
SMIM19-203ENST00000417410 MYO5BQ9ULV0 1848 aa32.42■■■□□ 2.78
SMIM19-203ENST00000417410 MED14O60244 1454 aa32.41■■■□□ 2.78
SMIM19-203ENST00000417410 NEURL4Q96JN8 1562 aa32.41■■■□□ 2.78
SMIM19-203ENST00000417410 SCAF11Q99590 1463 aaKnown RBP32.4■■■□□ 2.78
SMIM19-203ENST00000417410 CLTCL1P53675 1640 aa32.39■■■□□ 2.78
SMIM19-203ENST00000417410 LTKP29376 864 aa32.39■■■□□ 2.78
SMIM19-203ENST00000417410 HDGFP51858 240 aaKnown RBP32.39■■■□□ 2.78
SMIM19-203ENST00000417410 NPHP4O75161 1426 aaPredicted RBP32.38■■■□□ 2.77
SMIM19-203ENST00000417410 KIF1BO60333 1816 aa32.34■■■□□ 2.77
SMIM19-203ENST00000417410 RIMS2Q9UQ26 1411 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms